RNA–Protein interactions for RNA: ENST00000614377.1

CBWD3-209, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,994 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-209ENST00000614377 ACHEP22303 614 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 CEACAM3P40198 252 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 ECI1P42126 302 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 MMP15P51511 669 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 SLC37A1P57057 533 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 KLF3P57682 345 aaPredicted RBP2.82□□□□□ -1.96
CBWD3-209ENST00000614377 RPS20P60866 119 aaKnown RBP2.82□□□□□ -1.96
CBWD3-209ENST00000614377 SLC18A2Q05940 514 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 MALLQ13021 153 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 RAB32Q13637 225 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 PDE7AQ13946 482 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 SHHQ15465 462 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 MAPK11Q15759 364 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 CDO1Q16878 200 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 AMZ1Q400G9 498 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 EEF1AKMT2Q5JPI9 291 aaKnown RBP2.82□□□□□ -1.96
CBWD3-209ENST00000614377 CBWD5Q5RIA9 395 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 CATSPEREQ5SY80 951 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 PRAMEF8Q5VWM4 474 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 PRAMEF7Q5VXH5 474 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 TAPT1Q6NXT6 567 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 TMEM220Q6QAJ8 160 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 UNC93AQ86WB7 457 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 GLB1L2Q8IW92 636 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 OR11L1Q8NGX0 322 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 NUBPLQ8TB37 319 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 TCTEX1D2Q8WW35 142 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 ASB5Q8WWX0 329 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 TMEM234Q8WY98 164 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 KAT5Q92993 513 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 ADIPOR1Q96A54 375 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 BIRC7Q96CA5 298 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 SMIM12Q96EX1 92 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 VAT1Q99536 393 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 LPAR4Q99677 370 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 C7orf50Q9BRJ6 194 aaKnown RBP2.82□□□□□ -1.96
CBWD3-209ENST00000614377 ATG101Q9BSB4 218 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 NICN1Q9BSH3 213 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 MSTO1Q9BUK6 570 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 SNHG12Q9BXW3 62 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 PCDHAC1Q9H158 963 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 CACYBPQ9HB71 228 aaKnown RBP2.82□□□□□ -1.96
CBWD3-209ENST00000614377 ZNF160Q9HCG1 818 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 C6orf50Q9HD87 102 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 ABCB9Q9NP78 766 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 FZD3Q9NPG1 666 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 CHST7Q9NS84 486 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 OR6C3Q9NZP0 311 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 FBXL17Q9UF56 701 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 CGGBP1Q9UFW8 167 aaPredicted RBP2.82□□□□□ -1.96
CBWD3-209ENST00000614377 DKKL1Q9UK85 242 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 FZD4Q9ULV1 537 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 SLC7A11Q9UPY5 501 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 TRAPPC4Q9Y296 219 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 NPTNQ9Y639 398 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.82□□□□□ -1.96
CBWD3-209ENST00000614377 PTPRKQ15262 1439 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 CASKIN1Q8WXD9 1431 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 CEP170Q5SW79 1584 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 NEURL4Q96JN8 1562 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 CNTNAP4Q9C0A0 1308 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 PRSS51A0A1B0GVH4 220 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 FAM95CA0A1B0GW59 222 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 A0A1W2PQ45 241 aaPredicted RBP2.82□□□□□ -1.96
CBWD3-209ENST00000614377 A0A1W2PQY0 241 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 C17orf102A2RUQ5 167 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 C7orf72A4D263 438 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 MBD3L4A6NDZ8 208 aaPredicted RBP2.82□□□□□ -1.96
CBWD3-209ENST00000614377 FAM90A18PA6NE21 464 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 MBD3L3A6NE82 208 aaPredicted RBP2.82□□□□□ -1.96
CBWD3-209ENST00000614377 FAM90A16PA6NEW6 464 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 FAM90A20PA6NIJ5 464 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 WTIPA6NIX2 430 aaPredicted RBP2.82□□□□□ -1.96
CBWD3-209ENST00000614377 FAM90A9PA6NNJ1 464 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 FAM90A5PA8MXJ8 464 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 SMLR1H3BR10 107 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 RPL36A-HNRNPH2H7BZ11 118 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 LAMTOR5O43504 91 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 PRKAB2O43741 272 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 GGCTO75223 188 aaKnown RBP2.82□□□□□ -1.96
CBWD3-209ENST00000614377 OR4F21O95013 312 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 CTDNEP1O95476 244 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 TSPAN13O95857 204 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 C8GP07360 202 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 FAM90A15PP0C7V4 464 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 FAM90A14PP0C7W9 464 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 SMIM10L1P0DMW3 83 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 ITGA4P13612 1032 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 UBA1P22314 1058 aaKnown RBP2.82□□□□□ -1.96
CBWD3-209ENST00000614377 KLRC1P26715 233 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 CDKN1AP38936 164 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 HTR6P50406 440 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 NOVA1P51513 510 aaKnown RBP2.82□□□□□ -1.96
CBWD3-209ENST00000614377 RAB2AP61019 212 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 SSBP2P81877 361 aaPredicted RBP2.82□□□□□ -1.96
CBWD3-209ENST00000614377 TLE4Q04727 773 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 PRKCDQ05655 676 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 RBPJQ06330 500 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 ABHD18Q0P651 414 aa2.82□□□□□ -1.96
CBWD3-209ENST00000614377 MESP2Q0VG99 397 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms