RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 FNTBP49356 437 aa13.6□□□□□ -0.23
CDH1-213ENST00000612417 EVX1P49640 407 aa13.6□□□□□ -0.23
CDH1-213ENST00000612417 RNF144AP50876 292 aaPredicted RBP13.6□□□□□ -0.23
CDH1-213ENST00000612417 AFF3P51826 1226 aaKnown RBP13.6□□□□□ -0.23
CDH1-213ENST00000612417 CAV3P56539 151 aa13.6□□□□□ -0.23
CDH1-213ENST00000612417 FXYD6P3P58550 94 aa13.6□□□□□ -0.23
CDH1-213ENST00000612417 PPP1CAP62136 330 aa13.6□□□□□ -0.23
CDH1-213ENST00000612417 ZXDAP98168 799 aa13.6□□□□□ -0.23
CDH1-213ENST00000612417 RUNX2Q13950 521 aa13.6□□□□□ -0.23
CDH1-213ENST00000612417 DEFB133Q30KQ1 61 aa13.6□□□□□ -0.23
CDH1-213ENST00000612417 ZFP69Q49AA0 526 aa13.6□□□□□ -0.23
CDH1-213ENST00000612417 DEFB134Q4QY38 66 aa13.6□□□□□ -0.23
CDH1-213ENST00000612417 RPL13AP3Q6NVV1 102 aa13.6□□□□□ -0.23
CDH1-213ENST00000612417 NIPAL3Q6P499 406 aa13.6□□□□□ -0.23
CDH1-213ENST00000612417 ZNF438Q7Z4V0 828 aa13.6□□□□□ -0.23
CDH1-213ENST00000612417 GALNT12Q8IXK2 581 aa13.6□□□□□ -0.23
CDH1-213ENST00000612417 SLC7A5P1Q8MH63 180 aa13.6□□□□□ -0.23
CDH1-213ENST00000612417 ARL14Q8N4G2 192 aa13.6□□□□□ -0.23
CDH1-213ENST00000612417 Q8N9G6 341 aaPredicted RBP13.6□□□□□ -0.23
CDH1-213ENST00000612417 SIMC1Q8NDZ2 872 aa13.6□□□□□ -0.23
CDH1-213ENST00000612417 RSC1A1Q92681 617 aa13.6□□□□□ -0.23
CDH1-213ENST00000612417 IER2Q9BTL4 223 aa13.6□□□□□ -0.23
CDH1-213ENST00000612417 HDHD5Q9BXW7 423 aa13.6□□□□□ -0.23
CDH1-213ENST00000612417 DUSP15Q9H1R2 295 aaPredicted RBP13.6□□□□□ -0.23
CDH1-213ENST00000612417 MMP28Q9H239 520 aa13.6□□□□□ -0.23
CDH1-213ENST00000612417 OR52D1Q9H346 318 aa13.6□□□□□ -0.23
CDH1-213ENST00000612417 RNF121Q9H920 327 aa13.6□□□□□ -0.23
CDH1-213ENST00000612417 LYRM4Q9HD34 91 aa13.6□□□□□ -0.23
CDH1-213ENST00000612417 DUSP22Q9NRW4 184 aa13.6□□□□□ -0.23
CDH1-213ENST00000612417 COMMD3Q9UBI1 195 aa13.6□□□□□ -0.23
CDH1-213ENST00000612417 CABIN1Q9Y6J0 2220 aa13.6□□□□□ -0.23
CDH1-213ENST00000612417 LINC00854A0A1B0GVQ3 168 aa13.6□□□□□ -0.23
CDH1-213ENST00000612417 SHISA3A0PJX4 238 aa13.6□□□□□ -0.23
CDH1-213ENST00000612417 OR5K3A6NET4 321 aa13.6□□□□□ -0.23
CDH1-213ENST00000612417 BHLHE40O14503 412 aa13.6□□□□□ -0.23
CDH1-213ENST00000612417 TFECO14948 347 aaPredicted RBP13.6□□□□□ -0.23
CDH1-213ENST00000612417 STX11O75558 287 aa13.6□□□□□ -0.23
CDH1-213ENST00000612417 LYPD3O95274 346 aa13.6□□□□□ -0.23
CDH1-213ENST00000612417 ATP1B1P05026 303 aa13.6□□□□□ -0.23
CDH1-213ENST00000612417 MYL9P24844 172 aa13.6□□□□□ -0.23
CDH1-213ENST00000612417 HTR2AP28223 471 aa13.6□□□□□ -0.23
CDH1-213ENST00000612417 MLLT3P42568 568 aaPredicted RBP13.6□□□□□ -0.23
CDH1-213ENST00000612417 LSSP48449 732 aa13.6□□□□□ -0.23
CDH1-213ENST00000612417 SIM1P81133 766 aaPredicted RBP13.6□□□□□ -0.23
CDH1-213ENST00000612417 DAB2P98082 770 aa13.6□□□□□ -0.23
CDH1-213ENST00000612417 TBRG1Q3YBR2 411 aa13.6□□□□□ -0.23
CDH1-213ENST00000612417 MZT2AQ6P582 158 aa13.6□□□□□ -0.23
CDH1-213ENST00000612417 TMEM91Q6ZNR0 172 aa13.6□□□□□ -0.23
CDH1-213ENST00000612417 LNX2Q8N448 690 aa13.6□□□□□ -0.23
CDH1-213ENST00000612417 ACBD7Q8N6N7 88 aa13.6□□□□□ -0.23
CDH1-213ENST00000612417 FANK1Q8TC84 345 aa13.6□□□□□ -0.23
CDH1-213ENST00000612417 DNASE2BQ8WZ79 361 aa13.6□□□□□ -0.23
CDH1-213ENST00000612417 SLC7A6Q92536 515 aa13.6□□□□□ -0.23
CDH1-213ENST00000612417 PMM1Q92871 262 aa13.6□□□□□ -0.23
CDH1-213ENST00000612417 RERGQ96A58 199 aaPredicted RBP13.6□□□□□ -0.23
CDH1-213ENST00000612417 FRMD6Q96NE9 622 aa13.6□□□□□ -0.23
CDH1-213ENST00000612417 EVA1BQ9NVM1 165 aa13.6□□□□□ -0.23
CDH1-213ENST00000612417 SIDT1Q9NXL6 827 aaKnown RBP13.6□□□□□ -0.23
CDH1-213ENST00000612417 IL20RAQ9UHF4 553 aa13.6□□□□□ -0.23
CDH1-213ENST00000612417 PILRAQ9UKJ1 303 aa13.6□□□□□ -0.23
CDH1-213ENST00000612417 FAM47E-STBD1D6RA91 191 aa13.59□□□□□ -0.23
CDH1-213ENST00000612417 PLOD3O60568 738 aa13.59□□□□□ -0.23
CDH1-213ENST00000612417 HPGDSO60760 199 aa13.59□□□□□ -0.23
CDH1-213ENST00000612417 SLC2A2P11168 524 aaPredicted RBP13.59□□□□□ -0.23
CDH1-213ENST00000612417 TBXA2RP21731 343 aa13.59□□□□□ -0.23
CDH1-213ENST00000612417 APEX1P27695 318 aaKnown RBP13.59□□□□□ -0.23
CDH1-213ENST00000612417 SSTR4P31391 388 aa13.59□□□□□ -0.23
CDH1-213ENST00000612417 RCVRNP35243 200 aa13.59□□□□□ -0.23
CDH1-213ENST00000612417 ATP6V1E1P36543 226 aa13.59□□□□□ -0.23
CDH1-213ENST00000612417 KIR2DL3P43628 341 aa13.59□□□□□ -0.23
CDH1-213ENST00000612417 MAPK14Q16539 360 aa13.59□□□□□ -0.23
CDH1-213ENST00000612417 DCST2Q5T1A1 773 aa13.59□□□□□ -0.23
CDH1-213ENST00000612417 ZCCHC12Q6PEW1 402 aa13.59□□□□□ -0.23
CDH1-213ENST00000612417 WDR88Q6ZMY6 472 aa13.59□□□□□ -0.23
CDH1-213ENST00000612417 ABHD13Q7L211 337 aa13.59□□□□□ -0.23
CDH1-213ENST00000612417 BPHLQ86WA6 291 aaPredicted RBP13.59□□□□□ -0.23
CDH1-213ENST00000612417 GATAD2AQ86YP4 633 aa13.59□□□□□ -0.23
CDH1-213ENST00000612417 Q8N402 240 aa13.59□□□□□ -0.23
CDH1-213ENST00000612417 AVL9Q8NBF6 648 aa13.59□□□□□ -0.23
CDH1-213ENST00000612417 CAMKVQ8NCB2 501 aa13.59□□□□□ -0.23
CDH1-213ENST00000612417 OR52L1Q8NGH7 329 aa13.59□□□□□ -0.23
CDH1-213ENST00000612417 ZCCHC10Q8TBK6 192 aa13.59□□□□□ -0.23
CDH1-213ENST00000612417 CD180Q99467 661 aa13.59□□□□□ -0.23
CDH1-213ENST00000612417 STACQ99469 402 aa13.59□□□□□ -0.23
CDH1-213ENST00000612417 SLC38A3Q99624 504 aa13.59□□□□□ -0.23
CDH1-213ENST00000612417 ZFYVE21Q9BQ24 234 aa13.59□□□□□ -0.23
CDH1-213ENST00000612417 RNF32Q9H0A6 362 aa13.59□□□□□ -0.23
CDH1-213ENST00000612417 KCNN2Q9H2S1 579 aa13.59□□□□□ -0.23
CDH1-213ENST00000612417 LOC105369274A0A096LPK9 316 aa13.59□□□□□ -0.23
CDH1-213ENST00000612417 A0A0B4J293 547 aa13.59□□□□□ -0.23
CDH1-213ENST00000612417 LOC102723532A0A0G2JNH3 316 aa13.59□□□□□ -0.23
CDH1-213ENST00000612417 CDHR4A6H8M9 788 aa13.59□□□□□ -0.23
CDH1-213ENST00000612417 CENPXA8MT69 81 aa13.59□□□□□ -0.23
CDH1-213ENST00000612417 GTPBP1O00178 669 aaKnown RBP13.59□□□□□ -0.23
CDH1-213ENST00000612417 RGS9O75916 674 aaPredicted RBP13.59□□□□□ -0.23
CDH1-213ENST00000612417 PRG2P13727 222 aa13.59□□□□□ -0.23
CDH1-213ENST00000612417 PAICSP22234 425 aaKnown RBP13.59□□□□□ -0.23
CDH1-213ENST00000612417 PI4KAP42356 2102 aa13.59□□□□□ -0.23
CDH1-213ENST00000612417 DHPSP49366 369 aaPredicted RBP13.59□□□□□ -0.23
CDH1-213ENST00000612417 COL9A2Q14055 689 aaPredicted RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms