RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 REEP3Q6NUK4 255 aa8.09□□□□□ -1.11
SMAD4-217ENST00000611848 ZCCHC12Q6PEW1 402 aa8.09□□□□□ -1.11
SMAD4-217ENST00000611848 DHRS4L2Q6PKH6 230 aa8.09□□□□□ -1.11
SMAD4-217ENST00000611848 FAM180AQ6UWF9 173 aa8.09□□□□□ -1.11
SMAD4-217ENST00000611848 TMEM64Q6YI46 380 aa8.09□□□□□ -1.11
SMAD4-217ENST00000611848 MDGA2Q7Z553 956 aa8.09□□□□□ -1.11
SMAD4-217ENST00000611848 SLC34A3Q8N130 599 aa8.09□□□□□ -1.11
SMAD4-217ENST00000611848 BCORP1Q8N888 145 aa8.09□□□□□ -1.11
SMAD4-217ENST00000611848 ATG16L2Q8NAA4 619 aa8.09□□□□□ -1.11
SMAD4-217ENST00000611848 POGLUT1Q8NBL1 392 aa8.09□□□□□ -1.11
SMAD4-217ENST00000611848 NUP43Q8NFH3 380 aa8.09□□□□□ -1.11
SMAD4-217ENST00000611848 PRR7Q8TB68 274 aa8.09□□□□□ -1.11
SMAD4-217ENST00000611848 SPPL2AQ8TCT8 520 aa8.09□□□□□ -1.11
SMAD4-217ENST00000611848 PAQR8Q8TEZ7 354 aa8.09□□□□□ -1.11
SMAD4-217ENST00000611848 FAR1Q8WVX9 515 aa8.09□□□□□ -1.11
SMAD4-217ENST00000611848 GEMIN6Q8WXD5 167 aaKnown RBP8.09□□□□□ -1.11
SMAD4-217ENST00000611848 SGCDQ92629 289 aa8.09□□□□□ -1.11
SMAD4-217ENST00000611848 C12orf43Q96C57 262 aaKnown RBP8.09□□□□□ -1.11
SMAD4-217ENST00000611848 MAGED4Q96JG8 741 aa8.09□□□□□ -1.11
SMAD4-217ENST00000611848 UCN2Q96RP3 112 aa8.09□□□□□ -1.11
SMAD4-217ENST00000611848 SECISBP2Q96T21 854 aaKnown RBP8.09□□□□□ -1.11
SMAD4-217ENST00000611848 APOL4Q9BPW4 351 aa8.09□□□□□ -1.11
SMAD4-217ENST00000611848 PSD2Q9BQI7 771 aa8.09□□□□□ -1.11
SMAD4-217ENST00000611848 LMF2Q9BU23 707 aaKnown RBP8.09□□□□□ -1.11
SMAD4-217ENST00000611848 HES7Q9BYE0 225 aa8.09□□□□□ -1.11
SMAD4-217ENST00000611848 RIBC2Q9H4K1 309 aa8.09□□□□□ -1.11
SMAD4-217ENST00000611848 DUSP21Q9H596 190 aa8.09□□□□□ -1.11
SMAD4-217ENST00000611848 SH2D2AQ9NP31 389 aa8.09□□□□□ -1.11
SMAD4-217ENST00000611848 KRT84Q9NSB2 600 aa8.09□□□□□ -1.11
SMAD4-217ENST00000611848 SACM1LQ9NTJ5 587 aa8.09□□□□□ -1.11
SMAD4-217ENST00000611848 PAK1IP1Q9NWT1 392 aaPredicted RBP8.09□□□□□ -1.11
SMAD4-217ENST00000611848 CNIH4Q9P003 139 aa8.09□□□□□ -1.11
SMAD4-217ENST00000611848 GMPPBQ9Y5P6 360 aa8.09□□□□□ -1.11
SMAD4-217ENST00000611848 ZNF407Q9C0G0 2248 aa8.08□□□□□ -1.12
SMAD4-217ENST00000611848 FREM3P0C091 2139 aa8.08□□□□□ -1.12
SMAD4-217ENST00000611848 MRPS14O60783 128 aaKnown RBP8.08□□□□□ -1.12
SMAD4-217ENST00000611848 PPM1BO75688 479 aa8.08□□□□□ -1.12
SMAD4-217ENST00000611848 SOX30O94993 753 aa8.08□□□□□ -1.12
SMAD4-217ENST00000611848 OPN1SWP03999 348 aa8.08□□□□□ -1.12
SMAD4-217ENST00000611848 P04436 131 aa8.08□□□□□ -1.12
SMAD4-217ENST00000611848 TFPTP0C1Z6 253 aa8.08□□□□□ -1.12
SMAD4-217ENST00000611848 CNR1P21554 472 aa8.08□□□□□ -1.12
SMAD4-217ENST00000611848 MATN1P21941 496 aa8.08□□□□□ -1.12
SMAD4-217ENST00000611848 PCMT1P22061 227 aa8.08□□□□□ -1.12
SMAD4-217ENST00000611848 MAGEA8P43361 318 aa8.08□□□□□ -1.12
SMAD4-217ENST00000611848 CCT3P49368 545 aaKnown RBP8.08□□□□□ -1.12
SMAD4-217ENST00000611848 PRKAG1P54619 331 aa8.08□□□□□ -1.12
SMAD4-217ENST00000611848 NUP107P57740 925 aa8.08□□□□□ -1.12
SMAD4-217ENST00000611848 PSG6Q00889 435 aa8.08□□□□□ -1.12
SMAD4-217ENST00000611848 IL5RAQ01344 420 aa8.08□□□□□ -1.12
SMAD4-217ENST00000611848 PLCXD2Q0VAA5 305 aa8.08□□□□□ -1.12
SMAD4-217ENST00000611848 MAPK11Q15759 364 aa8.08□□□□□ -1.12
SMAD4-217ENST00000611848 NNATQ16517 81 aa8.08□□□□□ -1.12
SMAD4-217ENST00000611848 CYP27C1Q4G0S4 372 aa8.08□□□□□ -1.12
SMAD4-217ENST00000611848 PRR30Q53SZ7 412 aaPredicted RBP8.08□□□□□ -1.12
SMAD4-217ENST00000611848 GPR107Q5VW38 600 aa8.08□□□□□ -1.12
SMAD4-217ENST00000611848 BHLHB9Q6PI77 547 aa8.08□□□□□ -1.12
SMAD4-217ENST00000611848 NPSR1Q6W5P4 371 aa8.08□□□□□ -1.12
SMAD4-217ENST00000611848 NUP54Q7Z3B4 507 aa8.08□□□□□ -1.12
SMAD4-217ENST00000611848 SZRD1Q7Z422 152 aa8.08□□□□□ -1.12
SMAD4-217ENST00000611848 C6orf120Q7Z4R8 191 aa8.08□□□□□ -1.12
SMAD4-217ENST00000611848 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.08□□□□□ -1.12
SMAD4-217ENST00000611848 SULF2Q8IWU5 870 aa8.08□□□□□ -1.12
SMAD4-217ENST00000611848 CDRT4Q8N9R6 151 aa8.08□□□□□ -1.12
SMAD4-217ENST00000611848 OR56A1Q8NGH5 318 aa8.08□□□□□ -1.12
SMAD4-217ENST00000611848 SFXN5Q8TD22 340 aa8.08□□□□□ -1.12
SMAD4-217ENST00000611848 GRHL3Q8TE85 626 aa8.08□□□□□ -1.12
SMAD4-217ENST00000611848 GIPC3Q8TF64 312 aa8.08□□□□□ -1.12
SMAD4-217ENST00000611848 HOXB13Q92826 284 aaPredicted RBP8.08□□□□□ -1.12
SMAD4-217ENST00000611848 MUL1Q969V5 352 aa8.08□□□□□ -1.12
SMAD4-217ENST00000611848 MIB2Q96AX9 1013 aa8.08□□□□□ -1.12
SMAD4-217ENST00000611848 OMA1Q96E52 524 aa8.08□□□□□ -1.12
SMAD4-217ENST00000611848 HRASLS5Q96KN8 279 aa8.08□□□□□ -1.12
SMAD4-217ENST00000611848 MS4A4EQ96PG1 132 aa8.08□□□□□ -1.12
SMAD4-217ENST00000611848 TAAR6Q96RI8 345 aa8.08□□□□□ -1.12
SMAD4-217ENST00000611848 NODALQ96S42 347 aa8.08□□□□□ -1.12
SMAD4-217ENST00000611848 SH3GL3Q99963 347 aa8.08□□□□□ -1.12
SMAD4-217ENST00000611848 RUBCNLQ9H714 662 aa8.08□□□□□ -1.12
SMAD4-217ENST00000611848 Q9N2J8 555 aa8.08□□□□□ -1.12
SMAD4-217ENST00000611848 ZCCHC3Q9NUD5 404 aaKnown RBP8.08□□□□□ -1.12
SMAD4-217ENST00000611848 ASF1BQ9NVP2 202 aa8.08□□□□□ -1.12
SMAD4-217ENST00000611848 KIF17Q9P2E2 1029 aa8.08□□□□□ -1.12
SMAD4-217ENST00000611848 MRTO4Q9UKD2 239 aaKnown RBP8.08□□□□□ -1.12
SMAD4-217ENST00000611848 OR10H1Q9Y4A9 318 aa8.08□□□□□ -1.12
SMAD4-217ENST00000611848 SNX8Q9Y5X2 465 aa8.08□□□□□ -1.12
SMAD4-217ENST00000611848 ENPP4Q9Y6X5 453 aa8.08□□□□□ -1.12
SMAD4-217ENST00000611848 MYO18BQ8IUG5 2567 aa8.08□□□□□ -1.12
SMAD4-217ENST00000611848 HELZ2Q9BYK8 2649 aaKnown RBP8.08□□□□□ -1.12
SMAD4-217ENST00000611848 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.07□□□□□ -1.12
SMAD4-217ENST00000611848 ANKRD33BA6NCL7 494 aa8.07□□□□□ -1.12
SMAD4-217ENST00000611848 ARRDC5A6NEK1 342 aa8.07□□□□□ -1.12
SMAD4-217ENST00000611848 OR6C70A6NIJ9 312 aa8.07□□□□□ -1.12
SMAD4-217ENST00000611848 H3BMQ9 156 aa8.07□□□□□ -1.12
SMAD4-217ENST00000611848 HMGN4O00479 90 aa8.07□□□□□ -1.12
SMAD4-217ENST00000611848 NME6O75414 186 aaPredicted RBP8.07□□□□□ -1.12
SMAD4-217ENST00000611848 REM1O75628 298 aa8.07□□□□□ -1.12
SMAD4-217ENST00000611848 ATE1O95260 518 aa8.07□□□□□ -1.12
SMAD4-217ENST00000611848 ANGPTL1O95841 491 aa8.07□□□□□ -1.12
SMAD4-217ENST00000611848 CCL3P10147 92 aa8.07□□□□□ -1.12
SMAD4-217ENST00000611848 CYP4B1P13584 511 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 229.3 ms