RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 SPANXN2Q5MJ10 180 aa12.56□□□□□ -0.4
NEK3-205ENST00000610828 FCRLBQ6BAA4 426 aa12.56□□□□□ -0.4
NEK3-205ENST00000610828 C22orf42Q6IC83 251 aa12.56□□□□□ -0.4
NEK3-205ENST00000610828 GID4Q8IVV7 300 aa12.56□□□□□ -0.4
NEK3-205ENST00000610828 SDR16C5Q8N3Y7 309 aa12.56□□□□□ -0.4
NEK3-205ENST00000610828 LNX2Q8N448 690 aa12.56□□□□□ -0.4
NEK3-205ENST00000610828 SIRT6Q8N6T7 355 aa12.56□□□□□ -0.4
NEK3-205ENST00000610828 ZNF615Q8N8J6 731 aa12.56□□□□□ -0.4
NEK3-205ENST00000610828 OR4C3Q8NH37 302 aa12.56□□□□□ -0.4
NEK3-205ENST00000610828 BARHL1Q9BZE3 327 aa12.56□□□□□ -0.4
NEK3-205ENST00000610828 RAB33BQ9H082 229 aa12.56□□□□□ -0.4
NEK3-205ENST00000610828 CUTCQ9NTM9 273 aa12.56□□□□□ -0.4
NEK3-205ENST00000610828 TNFRSF10DQ9UBN6 386 aa12.56□□□□□ -0.4
NEK3-205ENST00000610828 EXOGQ9Y2C4 368 aaKnown RBP12.56□□□□□ -0.4
NEK3-205ENST00000610828 ZC3H12DA2A288 527 aaKnown RBP12.55□□□□□ -0.4
NEK3-205ENST00000610828 FAM86C2PA6NEL3 165 aa12.55□□□□□ -0.4
NEK3-205ENST00000610828 RGS5O15539 181 aa12.55□□□□□ -0.4
NEK3-205ENST00000610828 CDRT1O95170 752 aa12.55□□□□□ -0.4
NEK3-205ENST00000610828 CSTAP01040 98 aa12.55□□□□□ -0.4
NEK3-205ENST00000610828 RORCP51449 518 aa12.55□□□□□ -0.4
NEK3-205ENST00000610828 FOXK2Q01167 660 aa12.55□□□□□ -0.4
NEK3-205ENST00000610828 TPBGQ13641 420 aa12.55□□□□□ -0.4
NEK3-205ENST00000610828 ZNF791Q3KP31 576 aaPredicted RBP12.55□□□□□ -0.4
NEK3-205ENST00000610828 PLK5Q496M5 336 aa12.55□□□□□ -0.4
NEK3-205ENST00000610828 KLHL12Q53G59 568 aa12.55□□□□□ -0.4
NEK3-205ENST00000610828 PLEKHG7Q6ZR37 379 aa12.55□□□□□ -0.4
NEK3-205ENST00000610828 ZNF550Q7Z398 422 aa12.55□□□□□ -0.4
NEK3-205ENST00000610828 OAFQ86UD1 273 aa12.55□□□□□ -0.4
NEK3-205ENST00000610828 CAMKK1Q8N5S9 505 aa12.55□□□□□ -0.4
NEK3-205ENST00000610828 LSMEM1Q8N8F7 131 aa12.55□□□□□ -0.4
NEK3-205ENST00000610828 PSD4Q8NDX1 1056 aa12.55□□□□□ -0.4
NEK3-205ENST00000610828 EFHD2Q96C19 240 aaPredicted RBP12.55□□□□□ -0.4
NEK3-205ENST00000610828 CEP19Q96LK0 163 aa12.55□□□□□ -0.4
NEK3-205ENST00000610828 TM9SF2Q99805 663 aa12.55□□□□□ -0.4
NEK3-205ENST00000610828 CHRNA10Q9GZZ6 450 aa12.55□□□□□ -0.4
NEK3-205ENST00000610828 PNO1Q9NRX1 252 aaKnown RBP12.55□□□□□ -0.4
NEK3-205ENST00000610828 CRNNQ9UBG3 495 aaPredicted RBP12.55□□□□□ -0.4
NEK3-205ENST00000610828 RPS6KB2Q9UBS0 482 aa12.55□□□□□ -0.4
NEK3-205ENST00000610828 IGHV1OR21-1A0A087WYE8 117 aa12.55□□□□□ -0.4
NEK3-205ENST00000610828 SAGE2PA6NJ88 616 aa12.55□□□□□ -0.4
NEK3-205ENST00000610828 NPIPB9F8W1W9 429 aa12.55□□□□□ -0.4
NEK3-205ENST00000610828 HYAL3O43820 417 aaPredicted RBP12.55□□□□□ -0.4
NEK3-205ENST00000610828 HCN1O60741 890 aa12.55□□□□□ -0.4
NEK3-205ENST00000610828 LALBAP00709 142 aa12.55□□□□□ -0.4
NEK3-205ENST00000610828 TGM4P49221 684 aa12.55□□□□□ -0.4
NEK3-205ENST00000610828 BCAP31P51572 246 aa12.55□□□□□ -0.4
NEK3-205ENST00000610828 SLC16A1P53985 500 aa12.55□□□□□ -0.4
NEK3-205ENST00000610828 CRYZQ08257 329 aaKnown RBP12.55□□□□□ -0.4
NEK3-205ENST00000610828 CRTC2Q53ET0 693 aaPredicted RBP12.55□□□□□ -0.4
NEK3-205ENST00000610828 PRAMEF17Q5VTA0 474 aa12.55□□□□□ -0.4
NEK3-205ENST00000610828 PRPF38BQ5VTL8 546 aaKnown RBP12.55□□□□□ -0.4
NEK3-205ENST00000610828 NIPAL3Q6P499 406 aa12.55□□□□□ -0.4
NEK3-205ENST00000610828 KIRREL2Q6UWL6 708 aa12.55□□□□□ -0.4
NEK3-205ENST00000610828 KLHL36Q8N4N3 616 aa12.55□□□□□ -0.4
NEK3-205ENST00000610828 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.55□□□□□ -0.4
NEK3-205ENST00000610828 PPP1R14BQ96C90 147 aa12.55□□□□□ -0.4
NEK3-205ENST00000610828 LMF1Q96S06 567 aa12.55□□□□□ -0.4
NEK3-205ENST00000610828 ZNF426Q9BUY5 554 aa12.55□□□□□ -0.4
NEK3-205ENST00000610828 HCAR1Q9BXC0 346 aa12.55□□□□□ -0.4
NEK3-205ENST00000610828 FN3KQ9H479 309 aa12.55□□□□□ -0.4
NEK3-205ENST00000610828 ISYNA1Q9NPH2 558 aa12.55□□□□□ -0.4
NEK3-205ENST00000610828 CMC2Q9NRP2 79 aa12.55□□□□□ -0.4
NEK3-205ENST00000610828 ERVK13-1Q9NX77 482 aa12.55□□□□□ -0.4
NEK3-205ENST00000610828 DHCR7Q9UBM7 475 aaKnown RBP12.55□□□□□ -0.4
NEK3-205ENST00000610828 PRODH2Q9UF12 536 aa12.55□□□□□ -0.4
NEK3-205ENST00000610828 A0A075B6Q4 140 aa12.54□□□□□ -0.4
NEK3-205ENST00000610828 A8MUA0 341 aa12.54□□□□□ -0.4
NEK3-205ENST00000610828 SLC30A4O14863 429 aa12.54□□□□□ -0.4
NEK3-205ENST00000610828 BCAT2O15382 392 aaPredicted RBP12.54□□□□□ -0.4
NEK3-205ENST00000610828 IGHA1P01876 353 aa12.54□□□□□ -0.4
NEK3-205ENST00000610828 MYF5P13349 255 aa12.54□□□□□ -0.4
NEK3-205ENST00000610828 TGM1P22735 817 aa12.54□□□□□ -0.4
NEK3-205ENST00000610828 GTF2E2P29084 291 aaKnown RBP12.54□□□□□ -0.4
NEK3-205ENST00000610828 RBM34P42696 430 aaKnown RBP12.54□□□□□ -0.4
NEK3-205ENST00000610828 AFF3P51826 1226 aaKnown RBP12.54□□□□□ -0.4
NEK3-205ENST00000610828 PSMD4P55036 377 aaKnown RBP12.54□□□□□ -0.4
NEK3-205ENST00000610828 HSD11B2P80365 405 aa12.54□□□□□ -0.4
NEK3-205ENST00000610828 RUNX1T1Q06455 604 aa12.54□□□□□ -0.4
NEK3-205ENST00000610828 ULK3Q6PHR2 472 aa12.54□□□□□ -0.4
NEK3-205ENST00000610828 MEPCEQ7L2J0 689 aaKnown RBP12.54□□□□□ -0.4
NEK3-205ENST00000610828 SLC22A16Q86VW1 577 aa12.54□□□□□ -0.4
NEK3-205ENST00000610828 LYSMD2Q8IV50 215 aa12.54□□□□□ -0.4
NEK3-205ENST00000610828 Q8N9G6 341 aaPredicted RBP12.54□□□□□ -0.4
NEK3-205ENST00000610828 ZNF485Q8NCK3 441 aa12.54□□□□□ -0.4
NEK3-205ENST00000610828 FAM83FQ8NEG4 500 aaPredicted RBP12.54□□□□□ -0.4
NEK3-205ENST00000610828 SENP5Q96HI0 755 aaPredicted RBP12.54□□□□□ -0.4
NEK3-205ENST00000610828 TNFRSF13CQ96RJ3 184 aa12.54□□□□□ -0.4
NEK3-205ENST00000610828 PELOQ9BRX2 385 aaKnown RBP12.54□□□□□ -0.4
NEK3-205ENST00000610828 TBC1D17Q9HA65 648 aa12.54□□□□□ -0.4
NEK3-205ENST00000610828 SMURF1Q9HCE7 757 aa12.54□□□□□ -0.4
NEK3-205ENST00000610828 GMEB2Q9UKD1 530 aa12.54□□□□□ -0.4
NEK3-205ENST00000610828 ASXL3Q9C0F0 2248 aa12.54□□□□□ -0.4
NEK3-205ENST00000610828 SERINC4A6NH21 518 aa12.54□□□□□ -0.4
NEK3-205ENST00000610828 A8MU76 341 aa12.54□□□□□ -0.4
NEK3-205ENST00000610828 PRR23D1E9PI22 279 aaPredicted RBP12.54□□□□□ -0.4
NEK3-205ENST00000610828 BOLA2-SMG1P6H3BVE0 249 aa12.54□□□□□ -0.4
NEK3-205ENST00000610828 NUDT21O43809 227 aaKnown RBP12.54□□□□□ -0.4
NEK3-205ENST00000610828 PTP4A3O75365 173 aa12.54□□□□□ -0.4
NEK3-205ENST00000610828 CLPSP04118 112 aa12.54□□□□□ -0.4
NEK3-205ENST00000610828 PRR23D2P0DMB1 279 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms