RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 FTMTQ8N4E7 242 aa18.94■□□□□ 0.62
SSBP3-216ENST00000610401 TEAD3Q99594 435 aa18.94■□□□□ 0.62
SSBP3-216ENST00000610401 TIMP4Q99727 224 aa18.94■□□□□ 0.62
SSBP3-216ENST00000610401 MENTQ9BUN1 341 aa18.94■□□□□ 0.62
SSBP3-216ENST00000610401 EPHX3Q9H6B9 360 aa18.94■□□□□ 0.62
SSBP3-216ENST00000610401 WDR26Q9H7D7 661 aa18.94■□□□□ 0.62
SSBP3-216ENST00000610401 PELI2Q9HAT8 420 aa18.94■□□□□ 0.62
SSBP3-216ENST00000610401 GMDSO60547 372 aa18.94■□□□□ 0.62
SSBP3-216ENST00000610401 IL9P15248 144 aa18.94■□□□□ 0.62
SSBP3-216ENST00000610401 EXOSC2Q13868 293 aaKnown RBP18.94■□□□□ 0.62
SSBP3-216ENST00000610401 SLC25A25Q6KCM7 469 aa18.94■□□□□ 0.62
SSBP3-216ENST00000610401 SLC39A5Q6ZMH5 540 aa18.94■□□□□ 0.62
SSBP3-216ENST00000610401 FRRS1Q6ZNA5 592 aa18.94■□□□□ 0.62
SSBP3-216ENST00000610401 ZNF767PQ75MW2 155 aa18.94■□□□□ 0.62
SSBP3-216ENST00000610401 MEPCEQ7L2J0 689 aaKnown RBP18.94■□□□□ 0.62
SSBP3-216ENST00000610401 PRSS41Q7RTY9 318 aa18.94■□□□□ 0.62
SSBP3-216ENST00000610401 SLC44A3Q8N4M1 653 aa18.94■□□□□ 0.62
SSBP3-216ENST00000610401 FAM98AQ8NCA5 519 aaKnown RBP18.94■□□□□ 0.62
SSBP3-216ENST00000610401 OR6K6Q8NGW6 343 aa18.94■□□□□ 0.62
SSBP3-216ENST00000610401 OR8K3Q8NH51 312 aa18.94■□□□□ 0.62
SSBP3-216ENST00000610401 OTUB2Q96DC9 234 aa18.94■□□□□ 0.62
SSBP3-216ENST00000610401 FAM83CQ9BQN1 747 aa18.94■□□□□ 0.62
SSBP3-216ENST00000610401 SEC22CQ9BRL7 303 aa18.94■□□□□ 0.62
SSBP3-216ENST00000610401 CERS4Q9HA82 394 aa18.94■□□□□ 0.62
SSBP3-216ENST00000610401 WASH6PQ9NQA3 447 aa18.94■□□□□ 0.62
SSBP3-216ENST00000610401 GNG8Q9UK08 70 aa18.94■□□□□ 0.62
SSBP3-216ENST00000610401 MTCL1Q9Y4B5 1905 aaKnown RBP18.94■□□□□ 0.62
SSBP3-216ENST00000610401 KIF26AQ9ULI4 1882 aaPredicted RBP18.93■□□□□ 0.62
SSBP3-216ENST00000610401 VEGFDO43915 354 aa18.93■□□□□ 0.62
SSBP3-216ENST00000610401 RPN2P04844 631 aa18.93■□□□□ 0.62
SSBP3-216ENST00000610401 F3P13726 295 aa18.93■□□□□ 0.62
SSBP3-216ENST00000610401 DRD2P14416 443 aa18.93■□□□□ 0.62
SSBP3-216ENST00000610401 HTR2AP28223 471 aa18.93■□□□□ 0.62
SSBP3-216ENST00000610401 DUSP6Q16828 381 aa18.93■□□□□ 0.62
SSBP3-216ENST00000610401 SLC48A1Q6P1K1 146 aa18.93■□□□□ 0.62
SSBP3-216ENST00000610401 MBOAT2Q6ZWT7 520 aa18.93■□□□□ 0.62
SSBP3-216ENST00000610401 OR56A1Q8NGH5 318 aa18.93■□□□□ 0.62
SSBP3-216ENST00000610401 SMPDL3BQ92485 455 aa18.93■□□□□ 0.62
SSBP3-216ENST00000610401 CAPNS2Q96L46 248 aa18.93■□□□□ 0.62
SSBP3-216ENST00000610401 TNFRSF13CQ96RJ3 184 aa18.93■□□□□ 0.62
SSBP3-216ENST00000610401 RCE1Q9Y256 329 aa18.93■□□□□ 0.62
SSBP3-216ENST00000610401 IRGMA1A4Y4 181 aa18.93■□□□□ 0.62
SSBP3-216ENST00000610401 C4orf47A7E2U8 309 aa18.93■□□□□ 0.62
SSBP3-216ENST00000610401 PDGFAP04085 211 aa18.93■□□□□ 0.62
SSBP3-216ENST00000610401 RAB3BP20337 219 aa18.93■□□□□ 0.62
SSBP3-216ENST00000610401 FPR3P25089 353 aa18.93■□□□□ 0.62
SSBP3-216ENST00000610401 CTNNB1P35222 781 aa18.93■□□□□ 0.62
SSBP3-216ENST00000610401 VEGFCP49767 419 aa18.93■□□□□ 0.62
SSBP3-216ENST00000610401 RAB28P51157 221 aa18.93■□□□□ 0.62
SSBP3-216ENST00000610401 TMEM31Q5JXX7 168 aa18.93■□□□□ 0.62
SSBP3-216ENST00000610401 OAFQ86UD1 273 aa18.93■□□□□ 0.62
SSBP3-216ENST00000610401 RIT1Q92963 219 aa18.93■□□□□ 0.62
SSBP3-216ENST00000610401 CLEC4MQ9H2X3 399 aaPredicted RBP18.93■□□□□ 0.62
SSBP3-216ENST00000610401 KLK11Q9UBX7 282 aa18.93■□□□□ 0.62
SSBP3-216ENST00000610401 SEC16AO15027 2179 aa18.93■□□□□ 0.62
SSBP3-216ENST00000610401 LRRK1Q38SD2 2015 aa18.93■□□□□ 0.62
SSBP3-216ENST00000610401 TSPAN11A1L157 253 aa18.93■□□□□ 0.62
SSBP3-216ENST00000610401 SGK494L7N484 410 aa18.93■□□□□ 0.62
SSBP3-216ENST00000610401 CASC3O15234 703 aaKnown RBP18.93■□□□□ 0.62
SSBP3-216ENST00000610401 ANXA11P50995 505 aaKnown RBP18.93■□□□□ 0.62
SSBP3-216ENST00000610401 FOXK2Q01167 660 aa18.93■□□□□ 0.62
SSBP3-216ENST00000610401 GNA13Q14344 377 aa18.93■□□□□ 0.62
SSBP3-216ENST00000610401 LGALSLQ3ZCW2 172 aaPredicted RBP18.93■□□□□ 0.62
SSBP3-216ENST00000610401 TMEM255AQ5JRV8 349 aa18.93■□□□□ 0.62
SSBP3-216ENST00000610401 RNLSQ5VYX0 342 aa18.93■□□□□ 0.62
SSBP3-216ENST00000610401 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.93■□□□□ 0.62
SSBP3-216ENST00000610401 OR52E2Q8NGJ4 325 aa18.93■□□□□ 0.62
SSBP3-216ENST00000610401 ZNF296Q8WUU4 475 aaPredicted RBP18.93■□□□□ 0.62
SSBP3-216ENST00000610401 DDOQ99489 341 aa18.93■□□□□ 0.62
SSBP3-216ENST00000610401 BCL2L10Q9HD36 194 aa18.93■□□□□ 0.62
SSBP3-216ENST00000610401 ZMIZ1Q9ULJ6 1067 aa18.93■□□□□ 0.62
SSBP3-216ENST00000610401 CDC123O75794 336 aaPredicted RBP18.92■□□□□ 0.62
SSBP3-216ENST00000610401 MPC2O95563 127 aa18.92■□□□□ 0.62
SSBP3-216ENST00000610401 MT-ND5P03915 603 aa18.92■□□□□ 0.62
SSBP3-216ENST00000610401 NT5EP21589 574 aa18.92■□□□□ 0.62
SSBP3-216ENST00000610401 THBS2P35442 1172 aa18.92■□□□□ 0.62
SSBP3-216ENST00000610401 STAT5AP42229 794 aa18.92■□□□□ 0.62
SSBP3-216ENST00000610401 SNTA1Q13424 505 aa18.92■□□□□ 0.62
SSBP3-216ENST00000610401 TIGD3Q6B0B8 471 aa18.92■□□□□ 0.62
SSBP3-216ENST00000610401 KIAA1211LQ6NV74 962 aa18.92■□□□□ 0.62
SSBP3-216ENST00000610401 ZAR1Q86SH2 424 aa18.92■□□□□ 0.62
SSBP3-216ENST00000610401 OR5T3Q8NGG3 340 aa18.92■□□□□ 0.62
SSBP3-216ENST00000610401 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.92■□□□□ 0.628e-7■■■□□ 15.9
SSBP3-216ENST00000610401 FOLH1BQ9HBA9 442 aa18.92■□□□□ 0.62
SSBP3-216ENST00000610401 PRELID1Q9Y255 219 aa18.92■□□□□ 0.62
SSBP3-216ENST00000610401 ADAM18Q9Y3Q7 739 aa18.92■□□□□ 0.62
SSBP3-216ENST00000610401 SIGLEC5O15389 551 aa18.92■□□□□ 0.62
SSBP3-216ENST00000610401 HLA-DQB1P01920 261 aa18.92■□□□□ 0.62
SSBP3-216ENST00000610401 H2AFB2P0C5Z0 115 aa18.92■□□□□ 0.62
SSBP3-216ENST00000610401 SOX2P48431 317 aa18.92■□□□□ 0.62
SSBP3-216ENST00000610401 SIGLEC14Q08ET2 396 aa18.92■□□□□ 0.62
SSBP3-216ENST00000610401 OR1Q1Q15612 314 aa18.92■□□□□ 0.62
SSBP3-216ENST00000610401 NDUFAF6Q330K2 333 aa18.92■□□□□ 0.62
SSBP3-216ENST00000610401 SLC36A2Q495M3 483 aa18.92■□□□□ 0.62
SSBP3-216ENST00000610401 SLC25A30Q5SVS4 291 aa18.92■□□□□ 0.62
SSBP3-216ENST00000610401 OR4C6Q8NH72 309 aa18.92■□□□□ 0.62
SSBP3-216ENST00000610401 TMEM239Q8WW34 195 aa18.92■□□□□ 0.62
SSBP3-216ENST00000610401 CHFRQ96EP1 664 aa18.92■□□□□ 0.62
SSBP3-216ENST00000610401 ACTRT3Q9BYD9 372 aa18.92■□□□□ 0.62
SSBP3-216ENST00000610401 PIGUQ9H490 435 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms