RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 TREX2Q9BQ50 279 aaPredicted RBP13□□□□□ -0.33
HDDC2-204ENST00000608295 SRXN1Q9BYN0 137 aa13□□□□□ -0.33
HDDC2-204ENST00000608295 ACBD3Q9H3P7 528 aa13□□□□□ -0.33
HDDC2-204ENST00000608295 RMND5AQ9H871 391 aa13□□□□□ -0.33
HDDC2-204ENST00000608295 MCCC2Q9HCC0 563 aa13□□□□□ -0.33
HDDC2-204ENST00000608295 LRBAP50851 2863 aa13□□□□□ -0.33
HDDC2-204ENST00000608295 ANKHD1Q8IWZ3 2542 aaKnown RBP12.99□□□□□ -0.33
HDDC2-204ENST00000608295 LINC01387J3KSC0 135 aa12.99□□□□□ -0.33
HDDC2-204ENST00000608295 AP3D1O14617 1153 aa12.99□□□□□ -0.33
HDDC2-204ENST00000608295 EFNA2O43921 213 aa12.99□□□□□ -0.33
HDDC2-204ENST00000608295 KRT75O95678 551 aa12.99□□□□□ -0.33
HDDC2-204ENST00000608295 NUDT7P0C024 238 aa12.99□□□□□ -0.33
HDDC2-204ENST00000608295 NCF2P19878 526 aaPredicted RBP12.99□□□□□ -0.33
HDDC2-204ENST00000608295 CAPN3P20807 821 aa12.99□□□□□ -0.33
HDDC2-204ENST00000608295 KCNJ5P48544 419 aa12.99□□□□□ -0.33
HDDC2-204ENST00000608295 SUMO3P55854 103 aaPredicted RBP12.99□□□□□ -0.33
HDDC2-204ENST00000608295 RAC1P63000 192 aa12.99□□□□□ -0.33
HDDC2-204ENST00000608295 PLAURQ03405 335 aa12.99□□□□□ -0.33
HDDC2-204ENST00000608295 MERTKQ12866 999 aa12.99□□□□□ -0.33
HDDC2-204ENST00000608295 FGFBP1Q14512 234 aa12.99□□□□□ -0.33
HDDC2-204ENST00000608295 TMEM176BQ3YBM2 270 aaPredicted RBP12.99□□□□□ -0.33
HDDC2-204ENST00000608295 AGKQ53H12 422 aa12.99□□□□□ -0.33
HDDC2-204ENST00000608295 FBXW10Q5XX13 1052 aa12.99□□□□□ -0.33
HDDC2-204ENST00000608295 OR2A2Q6IF42 318 aa12.99□□□□□ -0.33
HDDC2-204ENST00000608295 EIF3MQ7L2H7 374 aaKnown RBP12.99□□□□□ -0.33
HDDC2-204ENST00000608295 ZNF563Q8TA94 476 aa12.99□□□□□ -0.33
HDDC2-204ENST00000608295 CNOT9Q92600 299 aaKnown RBP12.99□□□□□ -0.33
HDDC2-204ENST00000608295 C14orf79Q96F83 325 aa12.99□□□□□ -0.33
HDDC2-204ENST00000608295 ADGRG7Q96K78 797 aa12.99□□□□□ -0.33
HDDC2-204ENST00000608295 SLC38A1Q9H2H9 487 aa12.99□□□□□ -0.33
HDDC2-204ENST00000608295 C12orf49Q9H741 205 aa12.99□□□□□ -0.33
HDDC2-204ENST00000608295 RNF122Q9H9V4 155 aa12.99□□□□□ -0.33
HDDC2-204ENST00000608295 TPT1P8Q9HAU6 139 aa12.99□□□□□ -0.33
HDDC2-204ENST00000608295 STOML1Q9UBI4 398 aa12.99□□□□□ -0.33
HDDC2-204ENST00000608295 KCNN3Q9UGI6 736 aa12.99□□□□□ -0.33
HDDC2-204ENST00000608295 MCTS1Q9ULC4 181 aaKnown RBP12.99□□□□□ -0.33
HDDC2-204ENST00000608295 GPC6Q9Y625 555 aaPredicted RBP12.99□□□□□ -0.33
HDDC2-204ENST00000608295 CREBBPQ92793 2442 aa12.99□□□□□ -0.33
HDDC2-204ENST00000608295 CSMD1Q96PZ7 3565 aa12.98□□□□□ -0.33
HDDC2-204ENST00000608295 A0A0G2JND7 137 aa12.98□□□□□ -0.33
HDDC2-204ENST00000608295 C7orf72A4D263 438 aa12.98□□□□□ -0.33
HDDC2-204ENST00000608295 TUBAL3A6NHL2 446 aa12.98□□□□□ -0.33
HDDC2-204ENST00000608295 SYT5O00445 386 aa12.98□□□□□ -0.33
HDDC2-204ENST00000608295 EIF4E2O60573 245 aaKnown RBP12.98□□□□□ -0.33
HDDC2-204ENST00000608295 SOX30O94993 753 aa12.98□□□□□ -0.33
HDDC2-204ENST00000608295 NTN1O95631 604 aa12.98□□□□□ -0.33
HDDC2-204ENST00000608295 IL18BPO95998 194 aa12.98□□□□□ -0.33
HDDC2-204ENST00000608295 FCGR2AP12318 317 aa12.98□□□□□ -0.33
HDDC2-204ENST00000608295 KLK2P20151 261 aa12.98□□□□□ -0.33
HDDC2-204ENST00000608295 SLC7A1P30825 629 aa12.98□□□□□ -0.33
HDDC2-204ENST00000608295 PGM1P36871 562 aa12.98□□□□□ -0.33
HDDC2-204ENST00000608295 KIR2DL2P43627 348 aaPredicted RBP12.98□□□□□ -0.33
HDDC2-204ENST00000608295 ANXA11P50995 505 aaKnown RBP12.98□□□□□ -0.33
HDDC2-204ENST00000608295 MVDP53602 400 aa12.98□□□□□ -0.33
HDDC2-204ENST00000608295 DSTNP60981 165 aa12.98□□□□□ -0.33
HDDC2-204ENST00000608295 VRK2Q86Y07 508 aa12.98□□□□□ -0.33
HDDC2-204ENST00000608295 FUNDC1Q8IVP5 155 aa12.98□□□□□ -0.33
HDDC2-204ENST00000608295 ABHD3Q8WU67 409 aa12.98□□□□□ -0.33
HDDC2-204ENST00000608295 WDR60Q8WVS4 1066 aa12.98□□□□□ -0.33
HDDC2-204ENST00000608295 GTF2H4Q92759 462 aa12.98□□□□□ -0.33
HDDC2-204ENST00000608295 OSTF1Q92882 214 aa12.98□□□□□ -0.33
HDDC2-204ENST00000608295 STARD4Q96DR4 205 aa12.98□□□□□ -0.33
HDDC2-204ENST00000608295 SPDL1Q96EA4 605 aa12.98□□□□□ -0.33
HDDC2-204ENST00000608295 OR5B2Q96R09 309 aa12.98□□□□□ -0.33
HDDC2-204ENST00000608295 UCN2Q96RP3 112 aa12.98□□□□□ -0.33
HDDC2-204ENST00000608295 LAT2Q9GZY6 243 aa12.98□□□□□ -0.33
HDDC2-204ENST00000608295 PAIP1Q9H074 479 aaKnown RBP12.98□□□□□ -0.33
HDDC2-204ENST00000608295 COQ10BQ9H8M1 238 aa12.98□□□□□ -0.33
HDDC2-204ENST00000608295 HHATLQ9HCP6 504 aa12.98□□□□□ -0.33
HDDC2-204ENST00000608295 P2RX2Q9UBL9 471 aa12.98□□□□□ -0.33
HDDC2-204ENST00000608295 ZNF175Q9Y473 711 aa12.98□□□□□ -0.33
HDDC2-204ENST00000608295 EDF1O60869 148 aaKnown RBP12.97□□□□□ -0.33
HDDC2-204ENST00000608295 ADAM11O75078 769 aa12.97□□□□□ -0.33
HDDC2-204ENST00000608295 TGDSO95455 350 aa12.97□□□□□ -0.33
HDDC2-204ENST00000608295 TFPIP10646 304 aa12.97□□□□□ -0.33
HDDC2-204ENST00000608295 ELK4P28324 431 aa12.97□□□□□ -0.33
HDDC2-204ENST00000608295 EIF1P41567 113 aaKnown RBP12.97□□□□□ -0.33
HDDC2-204ENST00000608295 CTBP2P56545 445 aa12.97□□□□□ -0.33
HDDC2-204ENST00000608295 CARD18P57730 90 aa12.97□□□□□ -0.33
HDDC2-204ENST00000608295 SESN3P58005 492 aa12.97□□□□□ -0.33
HDDC2-204ENST00000608295 KCNJ10P78508 379 aa12.97□□□□□ -0.33
HDDC2-204ENST00000608295 FAM27E3Q08E93 113 aa12.97□□□□□ -0.33
HDDC2-204ENST00000608295 LRRC74AQ0VAA2 488 aa12.97□□□□□ -0.33
HDDC2-204ENST00000608295 SELENBP1Q13228 472 aa12.97□□□□□ -0.33
HDDC2-204ENST00000608295 ZNF239Q16600 458 aaKnown RBP12.97□□□□□ -0.33
HDDC2-204ENST00000608295 FBXL19-AS1Q494R0 122 aa12.97□□□□□ -0.33
HDDC2-204ENST00000608295 PAGE3Q5JUK9 113 aa12.97□□□□□ -0.33
HDDC2-204ENST00000608295 MRPL2Q5T653 305 aaKnown RBP12.97□□□□□ -0.33
HDDC2-204ENST00000608295 ANKRD34AQ69YU3 496 aa12.97□□□□□ -0.33
HDDC2-204ENST00000608295 ESPNLQ6ZVH7 1005 aa12.97□□□□□ -0.33
HDDC2-204ENST00000608295 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.97□□□□□ -0.33
HDDC2-204ENST00000608295 CDH24Q86UP0 819 aa12.97□□□□□ -0.33
HDDC2-204ENST00000608295 ARFGAP2Q8N6H7 521 aa12.97□□□□□ -0.33
HDDC2-204ENST00000608295 ZNF610Q8N9Z0 462 aa12.97□□□□□ -0.33
HDDC2-204ENST00000608295 MAL2Q969L2 176 aa12.97□□□□□ -0.33
HDDC2-204ENST00000608295 ZC3HAV1LQ96H79 300 aaKnown RBP12.97□□□□□ -0.33
HDDC2-204ENST00000608295 TMEM19Q96HH6 336 aa12.97□□□□□ -0.33
HDDC2-204ENST00000608295 TRNT1Q96Q11 434 aaKnown RBP12.97□□□□□ -0.33
HDDC2-204ENST00000608295 CCDC28BQ9BUN5 200 aa12.97□□□□□ -0.33
HDDC2-204ENST00000608295 PIGMQ9H3S5 423 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms