RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 DKKL1Q9UK85 242 aa6.98□□□□□ -1.29
MSH6-211ENST00000606499 UBR5O95071 2799 aaPredicted RBP6.98□□□□□ -1.29
MSH6-211ENST00000606499 NINQ8N4C6 2090 aa6.97□□□□□ -1.29
MSH6-211ENST00000606499 AQP12BA6NM10 295 aa6.97□□□□□ -1.29
MSH6-211ENST00000606499 CPSF4LA6NMK7 179 aaKnown RBP6.97□□□□□ -1.29
MSH6-211ENST00000606499 hCG_2039718K7EN88 272 aa6.97□□□□□ -1.29
MSH6-211ENST00000606499 ACOT7O00154 380 aa6.97□□□□□ -1.29
MSH6-211ENST00000606499 TFECO14948 347 aaPredicted RBP6.97□□□□□ -1.29
MSH6-211ENST00000606499 ATXN7O15265 892 aaPredicted RBP6.97□□□□□ -1.29
MSH6-211ENST00000606499 TPST2O60704 377 aa6.97□□□□□ -1.29
MSH6-211ENST00000606499 SEMA7AO75326 666 aa6.97□□□□□ -1.29
MSH6-211ENST00000606499 CBR3O75828 277 aa6.97□□□□□ -1.29
MSH6-211ENST00000606499 WISP2O76076 250 aa6.97□□□□□ -1.29
MSH6-211ENST00000606499 SEMG1P04279 462 aa6.97□□□□□ -1.29
MSH6-211ENST00000606499 IFNW1P05000 195 aa6.97□□□□□ -1.29
MSH6-211ENST00000606499 LINGO3P0C6S8 592 aa6.97□□□□□ -1.29
MSH6-211ENST00000606499 HK1P19367 917 aa6.97□□□□□ -1.29
MSH6-211ENST00000606499 PGCP20142 388 aa6.97□□□□□ -1.29
MSH6-211ENST00000606499 DPP4P27487 766 aa6.97□□□□□ -1.29
MSH6-211ENST00000606499 MSX1P28360 303 aa6.97□□□□□ -1.29
MSH6-211ENST00000606499 SLC6A8P48029 635 aa6.97□□□□□ -1.29
MSH6-211ENST00000606499 IDH2P48735 452 aaKnown RBP6.97□□□□□ -1.29
MSH6-211ENST00000606499 ZNF41P51814 821 aaPredicted RBP6.97□□□□□ -1.29
MSH6-211ENST00000606499 SUMO3P55854 103 aaPredicted RBP6.97□□□□□ -1.29
MSH6-211ENST00000606499 DSCR4P56555 118 aaPredicted RBP6.97□□□□□ -1.29
MSH6-211ENST00000606499 VLDLRP98155 873 aa6.97□□□□□ -1.29
MSH6-211ENST00000606499 EPS8Q12929 822 aa6.97□□□□□ -1.29
MSH6-211ENST00000606499 FOXF1Q12946 379 aa6.97□□□□□ -1.29
MSH6-211ENST00000606499 NFATC3Q12968 1075 aa6.97□□□□□ -1.29
MSH6-211ENST00000606499 CBFBQ13951 182 aa6.97□□□□□ -1.29
MSH6-211ENST00000606499 KPNB1Q14974 876 aaKnown RBP6.97□□□□□ -1.29
MSH6-211ENST00000606499 INAQ16352 499 aa6.97□□□□□ -1.29
MSH6-211ENST00000606499 ZSWIM7Q19AV6 140 aa6.97□□□□□ -1.29
MSH6-211ENST00000606499 HYAL4Q2M3T9 481 aa6.97□□□□□ -1.29
MSH6-211ENST00000606499 PLPPR5Q32ZL2 321 aa6.97□□□□□ -1.29
MSH6-211ENST00000606499 IFI44LQ53G44 452 aa6.97□□□□□ -1.29
MSH6-211ENST00000606499 CMPK2Q5EBM0 449 aa6.97□□□□□ -1.29
MSH6-211ENST00000606499 WIPI1Q5MNZ9 446 aaPredicted RBP6.97□□□□□ -1.29
MSH6-211ENST00000606499 RPUSD3Q6P087 351 aaKnown RBP6.97□□□□□ -1.29
MSH6-211ENST00000606499 POMZP3Q6PJE2 187 aa6.97□□□□□ -1.29
MSH6-211ENST00000606499 DEF8Q6ZN54 512 aa6.97□□□□□ -1.29
MSH6-211ENST00000606499 ZNF550Q7Z398 422 aa6.97□□□□□ -1.29
MSH6-211ENST00000606499 TSEN54Q7Z6J9 526 aaKnown RBP6.97□□□□□ -1.29
MSH6-211ENST00000606499 YRDCQ86U90 279 aaKnown RBP6.97□□□□□ -1.29
MSH6-211ENST00000606499 RANBP3LQ86VV4 465 aaPredicted RBP6.97□□□□□ -1.29
MSH6-211ENST00000606499 SLC22A16Q86VW1 577 aa6.97□□□□□ -1.29
MSH6-211ENST00000606499 HEATR5AQ86XA9 2040 aa6.97□□□□□ -1.29
MSH6-211ENST00000606499 AQP12AQ8IXF9 295 aa6.97□□□□□ -1.29
MSH6-211ENST00000606499 ZNF440Q8IYI8 595 aa6.97□□□□□ -1.29
MSH6-211ENST00000606499 ADGRG5Q8IZF4 528 aa6.97□□□□□ -1.29
MSH6-211ENST00000606499 CADM2Q8N3J6 435 aa6.97□□□□□ -1.29
MSH6-211ENST00000606499 FAM109AQ8N4B1 249 aa6.97□□□□□ -1.29
MSH6-211ENST00000606499 CISD2Q8N5K1 135 aaKnown RBP6.97□□□□□ -1.29
MSH6-211ENST00000606499 FAM83FQ8NEG4 500 aaPredicted RBP6.97□□□□□ -1.29
MSH6-211ENST00000606499 OR5M1Q8NGP8 315 aa6.97□□□□□ -1.29
MSH6-211ENST00000606499 OR14L1PQ8NHC6 308 aa6.97□□□□□ -1.29
MSH6-211ENST00000606499 ZNF563Q8TA94 476 aa6.97□□□□□ -1.29
MSH6-211ENST00000606499 GEMIN6Q8WXD5 167 aaKnown RBP6.97□□□□□ -1.29
MSH6-211ENST00000606499 SLC47A1Q96FL8 570 aa6.97□□□□□ -1.29
MSH6-211ENST00000606499 PYURFQ96I23 114 aa6.97□□□□□ -1.29
MSH6-211ENST00000606499 RSRC1Q96IZ7 334 aaKnown RBP6.97□□□□□ -1.29
MSH6-211ENST00000606499 C7orf34Q96L11 122 aa6.97□□□□□ -1.29
MSH6-211ENST00000606499 AMBRA1Q9C0C7 1298 aa6.97□□□□□ -1.29
MSH6-211ENST00000606499 DEFB127Q9H1M4 99 aa6.97□□□□□ -1.29
MSH6-211ENST00000606499 SLC6A15Q9H2J7 730 aa6.97□□□□□ -1.29
MSH6-211ENST00000606499 PTGES2Q9H7Z7 377 aa6.97□□□□□ -1.29
MSH6-211ENST00000606499 MED17Q9NVC6 651 aa6.97□□□□□ -1.29
MSH6-211ENST00000606499 TAS2R10Q9NYW0 307 aa6.97□□□□□ -1.29
MSH6-211ENST00000606499 TESQ9UGI8 421 aaKnown RBP6.97□□□□□ -1.29
MSH6-211ENST00000606499 SLC9A8Q9Y2E8 581 aa6.97□□□□□ -1.29
MSH6-211ENST00000606499 RPH3AQ9Y2J0 694 aaPredicted RBP6.97□□□□□ -1.29
MSH6-211ENST00000606499 LIPGQ9Y5X9 500 aa6.97□□□□□ -1.29
MSH6-211ENST00000606499 FLNCQ14315 2725 aa6.97□□□□□ -1.29
MSH6-211ENST00000606499 TCRBV3S1A0A5B6 114 aa6.96□□□□□ -1.3
MSH6-211ENST00000606499 DHRS12A0PJE2 317 aa6.96□□□□□ -1.3
MSH6-211ENST00000606499 OR2M5A3KFT3 312 aa6.96□□□□□ -1.3
MSH6-211ENST00000606499 FAM47E-STBD1D6RA91 191 aa6.96□□□□□ -1.3
MSH6-211ENST00000606499 J3KTA2 159 aa6.96□□□□□ -1.3
MSH6-211ENST00000606499 FAAHO00519 579 aa6.96□□□□□ -1.3
MSH6-211ENST00000606499 ZIC3O60481 467 aa6.96□□□□□ -1.3
MSH6-211ENST00000606499 TRAPPC6AO75865 159 aa6.96□□□□□ -1.3
MSH6-211ENST00000606499 DIRAS1O95057 198 aa6.96□□□□□ -1.3
MSH6-211ENST00000606499 HPNP05981 417 aa6.96□□□□□ -1.3
MSH6-211ENST00000606499 UQCRBP14927 111 aa6.96□□□□□ -1.3
MSH6-211ENST00000606499 PRKCAP17252 672 aa6.96□□□□□ -1.3
MSH6-211ENST00000606499 IL11P20809 199 aa6.96□□□□□ -1.3
MSH6-211ENST00000606499 PTNP21246 168 aa6.96□□□□□ -1.3
MSH6-211ENST00000606499 FUT4P22083 530 aa6.96□□□□□ -1.3
MSH6-211ENST00000606499 PSMA4P25789 261 aaKnown RBP6.96□□□□□ -1.3
MSH6-211ENST00000606499 SRD5A2P31213 254 aa6.96□□□□□ -1.3
MSH6-211ENST00000606499 YAP1P46937 504 aaKnown RBP6.96□□□□□ -1.3
MSH6-211ENST00000606499 SESN3P58005 492 aa6.96□□□□□ -1.3
MSH6-211ENST00000606499 B3GALT5-AS1P59052 145 aa6.96□□□□□ -1.3
MSH6-211ENST00000606499 ALDH6A1Q02252 535 aaKnown RBP6.96□□□□□ -1.3
MSH6-211ENST00000606499 KCNC4Q03721 635 aa6.96□□□□□ -1.3
MSH6-211ENST00000606499 GANABQ14697 944 aaKnown RBP6.96□□□□□ -1.3
MSH6-211ENST00000606499 ENTPD8Q5MY95 495 aa6.96□□□□□ -1.3
MSH6-211ENST00000606499 RAET1LQ5VY80 246 aa6.96□□□□□ -1.3
MSH6-211ENST00000606499 FAM180AQ6UWF9 173 aa6.96□□□□□ -1.3
MSH6-211ENST00000606499 PLEKHM3Q6ZWE6 761 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms