RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 WFIKKN1Q96NZ8 548 aa9.54□□□□□ -0.88
TUBE1-210ENST00000604967 PANX1Q96RD7 426 aa9.54□□□□□ -0.88
TUBE1-210ENST00000604967 THUMPD3Q9BV44 507 aaKnown RBP9.54□□□□□ -0.88
TUBE1-210ENST00000604967 LAT2Q9GZY6 243 aa9.54□□□□□ -0.88
TUBE1-210ENST00000604967 HOXD1Q9GZZ0 328 aa9.54□□□□□ -0.88
TUBE1-210ENST00000604967 PAIP1Q9H074 479 aaKnown RBP9.54□□□□□ -0.88
TUBE1-210ENST00000604967 SLC25A37Q9NYZ2 338 aa9.54□□□□□ -0.88
TUBE1-210ENST00000604967 IGHV3-15A0A0B4J1V0 119 aa9.53□□□□□ -0.88
TUBE1-210ENST00000604967 A0A1W2PNR3 127 aa9.53□□□□□ -0.88
TUBE1-210ENST00000604967 DEFB108AA8MXU0 73 aa9.53□□□□□ -0.88
TUBE1-210ENST00000604967 ZNF814B7Z6K7 855 aa9.53□□□□□ -0.88
TUBE1-210ENST00000604967 MSTNO14793 375 aa9.53□□□□□ -0.88
TUBE1-210ENST00000604967 UBDO15205 165 aa9.53□□□□□ -0.88
TUBE1-210ENST00000604967 HRGP04196 525 aa9.53□□□□□ -0.88
TUBE1-210ENST00000604967 THBDP07204 575 aa9.53□□□□□ -0.88
TUBE1-210ENST00000604967 GUSBP08236 651 aa9.53□□□□□ -0.88
TUBE1-210ENST00000604967 UBTFL6P0CB48 400 aaPredicted RBP9.53□□□□□ -0.88
TUBE1-210ENST00000604967 HPGDP15428 266 aa9.53□□□□□ -0.88
TUBE1-210ENST00000604967 CAPN3P20807 821 aa9.53□□□□□ -0.88
TUBE1-210ENST00000604967 ENPP1P22413 925 aa9.53□□□□□ -0.88
TUBE1-210ENST00000604967 NTF4P34130 210 aa9.53□□□□□ -0.88
TUBE1-210ENST00000604967 CPOXP36551 454 aa9.53□□□□□ -0.88
TUBE1-210ENST00000604967 MRPL19P49406 292 aaKnown RBP9.53□□□□□ -0.88
TUBE1-210ENST00000604967 KHKP50053 298 aa9.53□□□□□ -0.88
TUBE1-210ENST00000604967 ZNF41P51814 821 aaPredicted RBP9.53□□□□□ -0.88
TUBE1-210ENST00000604967 SESN3P58005 492 aa9.53□□□□□ -0.88
TUBE1-210ENST00000604967 ZNF239Q16600 458 aaKnown RBP9.53□□□□□ -0.88
TUBE1-210ENST00000604967 TMEM176BQ3YBM2 270 aaPredicted RBP9.53□□□□□ -0.88
TUBE1-210ENST00000604967 RPS26P11Q5JNZ5 115 aaPredicted RBP9.53□□□□□ -0.88
TUBE1-210ENST00000604967 PAGE3Q5JUK9 113 aa9.53□□□□□ -0.88
TUBE1-210ENST00000604967 HBMQ6B0K9 141 aa9.53□□□□□ -0.88
TUBE1-210ENST00000604967 BHLHB9Q6PI77 547 aa9.53□□□□□ -0.88
TUBE1-210ENST00000604967 C16orf62Q7Z3J2 963 aa9.53□□□□□ -0.88
TUBE1-210ENST00000604967 NUFIP2Q7Z417 695 aaKnown RBP9.53□□□□□ -0.88
TUBE1-210ENST00000604967 COMTD1Q86VU5 262 aa9.53□□□□□ -0.88
TUBE1-210ENST00000604967 TMEM200AQ86VY9 491 aa9.53□□□□□ -0.88
TUBE1-210ENST00000604967 CDC20BQ86Y33 519 aa9.53□□□□□ -0.88
TUBE1-210ENST00000604967 KIRREL3Q8IZU9 778 aa9.53□□□□□ -0.88
TUBE1-210ENST00000604967 ATP6V1C2Q8NEY4 427 aa9.53□□□□□ -0.88
TUBE1-210ENST00000604967 FAM222BQ8WU58 562 aa9.53□□□□□ -0.88
TUBE1-210ENST00000604967 ABHD3Q8WU67 409 aa9.53□□□□□ -0.88
TUBE1-210ENST00000604967 OSTF1Q92882 214 aa9.53□□□□□ -0.88
TUBE1-210ENST00000604967 DNAJA3Q96EY1 480 aa9.53□□□□□ -0.88
TUBE1-210ENST00000604967 KLHL15Q96M94 604 aa9.53□□□□□ -0.88
TUBE1-210ENST00000604967 IKZF5Q9H5V7 419 aa9.53□□□□□ -0.88
TUBE1-210ENST00000604967 ZNF385DQ9H6B1 395 aa9.53□□□□□ -0.88
TUBE1-210ENST00000604967 PLEKHF2Q9H8W4 249 aa9.53□□□□□ -0.88
TUBE1-210ENST00000604967 RLIMQ9NVW2 624 aa9.53□□□□□ -0.88
TUBE1-210ENST00000604967 DNAJB12Q9NXW2 375 aaKnown RBP9.53□□□□□ -0.88
TUBE1-210ENST00000604967 ZIM2Q9NZV7 527 aa9.53□□□□□ -0.88
TUBE1-210ENST00000604967 ITGB1BP2Q9UKP3 347 aa9.53□□□□□ -0.88
TUBE1-210ENST00000604967 WDR45Q9Y484 360 aa9.53□□□□□ -0.88
TUBE1-210ENST00000604967 DSPPQ9NZW4 1301 aa9.53□□□□□ -0.88
TUBE1-210ENST00000604967 TRBV5-3A0A0A0MS03 114 aa9.52□□□□□ -0.89
TUBE1-210ENST00000604967 TUBAL3A6NHL2 446 aa9.52□□□□□ -0.89
TUBE1-210ENST00000604967 AGAP5A6NIR3 686 aa9.52□□□□□ -0.89
TUBE1-210ENST00000604967 DUXAA6NLW8 204 aa9.52□□□□□ -0.89
TUBE1-210ENST00000604967 SLCO1B7G3V0H7 640 aa9.52□□□□□ -0.89
TUBE1-210ENST00000604967 GTPBP1O00178 669 aaKnown RBP9.52□□□□□ -0.89
TUBE1-210ENST00000604967 EIF4E2O60573 245 aaKnown RBP9.52□□□□□ -0.89
TUBE1-210ENST00000604967 RAMP1O60894 148 aa9.52□□□□□ -0.89
TUBE1-210ENST00000604967 SS18L1O75177 396 aaPredicted RBP9.52□□□□□ -0.89
TUBE1-210ENST00000604967 CYP7B1O75881 506 aa9.52□□□□□ -0.89
TUBE1-210ENST00000604967 SMNDC1O75940 238 aaKnown RBP eCLIP9.52□□□□□ -0.89
TUBE1-210ENST00000604967 AK1P00568 194 aa9.52□□□□□ -0.89
TUBE1-210ENST00000604967 CSTAP01040 98 aa9.52□□□□□ -0.89
TUBE1-210ENST00000604967 CRHP06850 196 aa9.52□□□□□ -0.89
TUBE1-210ENST00000604967 TFPTP0C1Z6 253 aa9.52□□□□□ -0.89
TUBE1-210ENST00000604967 EPXP11678 715 aa9.52□□□□□ -0.89
TUBE1-210ENST00000604967 CHI3L1P36222 383 aaPredicted RBP9.52□□□□□ -0.89
TUBE1-210ENST00000604967 CCR4P51679 360 aa9.52□□□□□ -0.89
TUBE1-210ENST00000604967 POLR2JP52435 117 aaKnown RBP9.52□□□□□ -0.89
TUBE1-210ENST00000604967 SUMO3P55854 103 aaPredicted RBP9.52□□□□□ -0.89
TUBE1-210ENST00000604967 SORDQ00796 357 aa9.52□□□□□ -0.89
TUBE1-210ENST00000604967 POU4F3Q15319 338 aa9.52□□□□□ -0.89
TUBE1-210ENST00000604967 GSTA3Q16772 222 aa9.52□□□□□ -0.89
TUBE1-210ENST00000604967 ANKRD34AQ69YU3 496 aa9.52□□□□□ -0.89
TUBE1-210ENST00000604967 ESPNLQ6ZVH7 1005 aa9.52□□□□□ -0.89
TUBE1-210ENST00000604967 PLEKHM3Q6ZWE6 761 aa9.52□□□□□ -0.89
TUBE1-210ENST00000604967 FAM214BQ7L5A3 538 aa9.52□□□□□ -0.89
TUBE1-210ENST00000604967 ZNF550Q7Z398 422 aa9.52□□□□□ -0.89
TUBE1-210ENST00000604967 P4HA3Q7Z4N8 544 aa9.52□□□□□ -0.89
TUBE1-210ENST00000604967 ZNF619Q8N2I2 560 aa9.52□□□□□ -0.89
TUBE1-210ENST00000604967 TMCO5AQ8N6Q1 288 aa9.52□□□□□ -0.89
TUBE1-210ENST00000604967 GLB1L3Q8NCI6 653 aaPredicted RBP9.52□□□□□ -0.89
TUBE1-210ENST00000604967 RNF128Q8TEB7 428 aa9.52□□□□□ -0.89
TUBE1-210ENST00000604967 CKAP2Q8WWK9 683 aa9.52□□□□□ -0.89
TUBE1-210ENST00000604967 TRNT1Q96Q11 434 aaKnown RBP9.52□□□□□ -0.89
TUBE1-210ENST00000604967 HS3ST6Q96QI5 342 aa9.52□□□□□ -0.89
TUBE1-210ENST00000604967 CCDC106Q9BWC9 280 aa9.52□□□□□ -0.89
TUBE1-210ENST00000604967 PIGMQ9H3S5 423 aa9.52□□□□□ -0.89
TUBE1-210ENST00000604967 TCF7L2Q9NQB0 619 aa9.52□□□□□ -0.89
TUBE1-210ENST00000604967 KLHL28Q9NXS3 571 aa9.52□□□□□ -0.89
TUBE1-210ENST00000604967 PCDHGB4Q9UN71 923 aa9.52□□□□□ -0.89
TUBE1-210ENST00000604967 TESMINQ9Y4I5 508 aa9.52□□□□□ -0.89
TUBE1-210ENST00000604967 PCDHB14Q9Y5E9 798 aa9.52□□□□□ -0.89
TUBE1-210ENST00000604967 GPC6Q9Y625 555 aaPredicted RBP9.52□□□□□ -0.89
TUBE1-210ENST00000604967 ITPR3Q14573 2671 aa9.52□□□□□ -0.89
TUBE1-210ENST00000604967 PRRC2AP48634 2157 aaKnown RBP9.51□□□□□ -0.89
TUBE1-210ENST00000604967 FAM234BA2RU67 622 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms