RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 TRNT1Q96Q11 434 aaKnown RBP12.95□□□□□ -0.34
TUBE1-208ENST00000604743 TREX2Q9BQ50 279 aaPredicted RBP12.95□□□□□ -0.34
TUBE1-208ENST00000604743 ZNF559Q9BR84 538 aa12.95□□□□□ -0.34
TUBE1-208ENST00000604743 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.95□□□□□ -0.34
TUBE1-208ENST00000604743 PCDHB14Q9Y5E9 798 aa12.95□□□□□ -0.34
TUBE1-208ENST00000604743 GPC6Q9Y625 555 aaPredicted RBP12.95□□□□□ -0.34
TUBE1-208ENST00000604743 FBN2P35556 2912 aa12.95□□□□□ -0.34
TUBE1-208ENST00000604743 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.94□□□□□ -0.34
TUBE1-208ENST00000604743 AQP8O94778 261 aa12.94□□□□□ -0.34
TUBE1-208ENST00000604743 SYNGR4O95473 234 aa12.94□□□□□ -0.34
TUBE1-208ENST00000604743 CD1EP15812 388 aa12.94□□□□□ -0.34
TUBE1-208ENST00000604743 SHC1P29353 583 aa12.94□□□□□ -0.34
TUBE1-208ENST00000604743 PGM1P36871 562 aa12.94□□□□□ -0.34
TUBE1-208ENST00000604743 KIR2DL3P43628 341 aa12.94□□□□□ -0.34
TUBE1-208ENST00000604743 SLC6A8P48029 635 aa12.94□□□□□ -0.34
TUBE1-208ENST00000604743 MRPL19P49406 292 aaKnown RBP12.94□□□□□ -0.34
TUBE1-208ENST00000604743 MVDP53602 400 aa12.94□□□□□ -0.34
TUBE1-208ENST00000604743 DSTNP60981 165 aa12.94□□□□□ -0.34
TUBE1-208ENST00000604743 KCNJ10P78508 379 aa12.94□□□□□ -0.34
TUBE1-208ENST00000604743 CTU2Q2VPK5 515 aaKnown RBP12.94□□□□□ -0.34
TUBE1-208ENST00000604743 TMEM176BQ3YBM2 270 aaPredicted RBP12.94□□□□□ -0.34
TUBE1-208ENST00000604743 HSP90B2PQ58FF3 399 aa12.94□□□□□ -0.34
TUBE1-208ENST00000604743 VWA1Q6PCB0 445 aa12.94□□□□□ -0.34
TUBE1-208ENST00000604743 BLOC1S3Q6QNY0 202 aa12.94□□□□□ -0.34
TUBE1-208ENST00000604743 LRRC74BQ6ZQY2 392 aa12.94□□□□□ -0.34
TUBE1-208ENST00000604743 ESPNLQ6ZVH7 1005 aa12.94□□□□□ -0.34
TUBE1-208ENST00000604743 ZZZ3Q8IYH5 903 aa12.94□□□□□ -0.34
TUBE1-208ENST00000604743 OR2V1Q8NHB1 315 aa12.94□□□□□ -0.34
TUBE1-208ENST00000604743 ZNF563Q8TA94 476 aa12.94□□□□□ -0.34
TUBE1-208ENST00000604743 OSTF1Q92882 214 aa12.94□□□□□ -0.34
TUBE1-208ENST00000604743 ADGRG7Q96K78 797 aa12.94□□□□□ -0.34
TUBE1-208ENST00000604743 KLHL15Q96M94 604 aa12.94□□□□□ -0.34
TUBE1-208ENST00000604743 RBM24Q9BX46 236 aaKnown RBP12.94□□□□□ -0.34
TUBE1-208ENST00000604743 PAIP1Q9H074 479 aaKnown RBP12.94□□□□□ -0.34
TUBE1-208ENST00000604743 SLC38A1Q9H2H9 487 aa12.94□□□□□ -0.34
TUBE1-208ENST00000604743 P2RX2Q9UBL9 471 aa12.94□□□□□ -0.34
TUBE1-208ENST00000604743 MCTS1Q9ULC4 181 aaKnown RBP12.94□□□□□ -0.34
TUBE1-208ENST00000604743 CLEC4AQ9UMR7 237 aa12.94□□□□□ -0.34
TUBE1-208ENST00000604743 SLC35A3Q9Y2D2 325 aa12.94□□□□□ -0.34
TUBE1-208ENST00000604743 ZNF175Q9Y473 711 aa12.94□□□□□ -0.34
TUBE1-208ENST00000604743 CREBBPQ92793 2442 aa12.94□□□□□ -0.34
TUBE1-208ENST00000604743 TACC2O95359 2948 aa12.94□□□□□ -0.34
TUBE1-208ENST00000604743 CLIC1O00299 241 aa12.93□□□□□ -0.34
TUBE1-208ENST00000604743 TNFSF13O75888 250 aa12.93□□□□□ -0.34
TUBE1-208ENST00000604743 PLGP00747 810 aaPredicted RBP12.93□□□□□ -0.34
TUBE1-208ENST00000604743 BCHEP06276 602 aa12.93□□□□□ -0.34
TUBE1-208ENST00000604743 GUSBP08236 651 aa12.93□□□□□ -0.34
TUBE1-208ENST00000604743 IL7RP16871 459 aa12.93□□□□□ -0.34
TUBE1-208ENST00000604743 PGCP20142 388 aa12.93□□□□□ -0.34
TUBE1-208ENST00000604743 CAPN3P20807 821 aa12.93□□□□□ -0.34
TUBE1-208ENST00000604743 ELK4P28324 431 aa12.93□□□□□ -0.34
TUBE1-208ENST00000604743 ADH6P28332 368 aa12.93□□□□□ -0.34
TUBE1-208ENST00000604743 CPOXP36551 454 aa12.93□□□□□ -0.34
TUBE1-208ENST00000604743 ATP4BP51164 291 aa12.93□□□□□ -0.34
TUBE1-208ENST00000604743 CARD18P57730 90 aa12.93□□□□□ -0.34
TUBE1-208ENST00000604743 KRTAP10-9P60411 292 aa12.93□□□□□ -0.34
TUBE1-208ENST00000604743 MERTKQ12866 999 aa12.93□□□□□ -0.34
TUBE1-208ENST00000604743 PAGE3Q5JUK9 113 aa12.93□□□□□ -0.34
TUBE1-208ENST00000604743 ARFGAP2Q8N6H7 521 aa12.93□□□□□ -0.34
TUBE1-208ENST00000604743 WDR60Q8WVS4 1066 aa12.93□□□□□ -0.34
TUBE1-208ENST00000604743 ROBO4Q8WZ75 1007 aa12.93□□□□□ -0.34
TUBE1-208ENST00000604743 CNOT9Q92600 299 aaKnown RBP12.93□□□□□ -0.34
TUBE1-208ENST00000604743 STARD4Q96DR4 205 aa12.93□□□□□ -0.34
TUBE1-208ENST00000604743 C14orf79Q96F83 325 aa12.93□□□□□ -0.34
TUBE1-208ENST00000604743 MRGPRX4Q96LA9 322 aa12.93□□□□□ -0.34
TUBE1-208ENST00000604743 PIGMQ9H3S5 423 aa12.93□□□□□ -0.34
TUBE1-208ENST00000604743 MTHFD2LQ9H903 347 aaPredicted RBP12.93□□□□□ -0.34
TUBE1-208ENST00000604743 RNF122Q9H9V4 155 aa12.93□□□□□ -0.34
TUBE1-208ENST00000604743 JKAMPQ9P055 326 aa12.93□□□□□ -0.34
TUBE1-208ENST00000604743 SLAMF8Q9P0V8 285 aa12.93□□□□□ -0.34
TUBE1-208ENST00000604743 KCNN3Q9UGI6 736 aa12.93□□□□□ -0.34
TUBE1-208ENST00000604743 FOXD3Q9UJU5 478 aaPredicted RBP12.93□□□□□ -0.34
TUBE1-208ENST00000604743 PACSIN3Q9UKS6 424 aa12.93□□□□□ -0.34
TUBE1-208ENST00000604743 ANKHD1Q8IWZ3 2542 aaKnown RBP12.92□□□□□ -0.34
TUBE1-208ENST00000604743 A0A096LPI6 279 aa12.92□□□□□ -0.34
TUBE1-208ENST00000604743 TMEM247A6NEH6 219 aa12.92□□□□□ -0.34
TUBE1-208ENST00000604743 AGAP5A6NIR3 686 aa12.92□□□□□ -0.34
TUBE1-208ENST00000604743 GJE1A6NN92 205 aa12.92□□□□□ -0.34
TUBE1-208ENST00000604743 ADAMDEC1O15204 470 aa12.92□□□□□ -0.34
TUBE1-208ENST00000604743 CRHP06850 196 aa12.92□□□□□ -0.34
TUBE1-208ENST00000604743 VIMP08670 466 aaKnown RBP12.92□□□□□ -0.34
TUBE1-208ENST00000604743 NUDT7P0C024 238 aa12.92□□□□□ -0.34
TUBE1-208ENST00000604743 FCGR2AP12318 317 aa12.92□□□□□ -0.34
TUBE1-208ENST00000604743 KIR2DL2P43627 348 aaPredicted RBP12.92□□□□□ -0.34
TUBE1-208ENST00000604743 CRISP3P54108 245 aa12.92□□□□□ -0.34
TUBE1-208ENST00000604743 SESN3P58005 492 aa12.92□□□□□ -0.34
TUBE1-208ENST00000604743 EEF1A1P68104 462 aaKnown RBP12.92□□□□□ -0.34
TUBE1-208ENST00000604743 RGNQ15493 299 aa12.92□□□□□ -0.34
TUBE1-208ENST00000604743 MAPK11Q15759 364 aa12.92□□□□□ -0.34
TUBE1-208ENST00000604743 FBXL19-AS1Q494R0 122 aa12.92□□□□□ -0.34
TUBE1-208ENST00000604743 RPS26P11Q5JNZ5 115 aaPredicted RBP12.92□□□□□ -0.34
TUBE1-208ENST00000604743 EEF1A1P5Q5VTE0 462 aa12.92□□□□□ -0.34
TUBE1-208ENST00000604743 BTLAQ7Z6A9 289 aa12.92□□□□□ -0.34
TUBE1-208ENST00000604743 TMEM200AQ86VY9 491 aa12.92□□□□□ -0.34
TUBE1-208ENST00000604743 KIF18BQ86Y91 864 aa12.92□□□□□ -0.34
TUBE1-208ENST00000604743 LINC01560Q8TB33 94 aa12.92□□□□□ -0.34
TUBE1-208ENST00000604743 TMEM234Q8WY98 164 aa12.92□□□□□ -0.34
TUBE1-208ENST00000604743 TMEM19Q96HH6 336 aa12.92□□□□□ -0.34
TUBE1-208ENST00000604743 LURAP1Q96LR2 239 aa12.92□□□□□ -0.34
TUBE1-208ENST00000604743 TMEM120AQ9BXJ8 343 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms