RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 GDF1P27539 372 aa17.1■□□□□ 0.33
CCDC9-205ENST00000600117 MSX2P35548 267 aaPredicted RBP17.1■□□□□ 0.33
CCDC9-205ENST00000600117 P2RX1P51575 399 aa17.1■□□□□ 0.33
CCDC9-205ENST00000600117 ZSWIM7Q19AV6 140 aa17.1■□□□□ 0.33
CCDC9-205ENST00000600117 GLIPR1L2Q4G1C9 344 aa17.1■□□□□ 0.33
CCDC9-205ENST00000600117 CCDC121Q6ZUS5 278 aa17.1■□□□□ 0.33
CCDC9-205ENST00000600117 GRAMD2AQ8IUY3 354 aa17.1■□□□□ 0.33
CCDC9-205ENST00000600117 TOR1AIP2Q8NFQ8 470 aa17.1■□□□□ 0.33
CCDC9-205ENST00000600117 TNIP2Q8NFZ5 429 aa17.1■□□□□ 0.33
CCDC9-205ENST00000600117 FIG4Q92562 907 aa17.1■□□□□ 0.33
CCDC9-205ENST00000600117 ZNF524Q96C55 264 aa17.1■□□□□ 0.33
CCDC9-205ENST00000600117 ARSGQ96EG1 525 aa17.1■□□□□ 0.33
CCDC9-205ENST00000600117 C1GALT1C1Q96EU7 318 aa17.1■□□□□ 0.33
CCDC9-205ENST00000600117 CLPTM1LQ96KA5 538 aa17.1■□□□□ 0.33
CCDC9-205ENST00000600117 SLX1AQ9BQ83 275 aa17.1■□□□□ 0.33
CCDC9-205ENST00000600117 OR2B2Q9GZK3 357 aa17.1■□□□□ 0.33
CCDC9-205ENST00000600117 TSPAN10Q9H1Z9 355 aaPredicted RBP17.1■□□□□ 0.33
CCDC9-205ENST00000600117 CACYBPQ9HB71 228 aaKnown RBP17.1■□□□□ 0.33
CCDC9-205ENST00000600117 EXOSC3Q9NQT5 275 aaKnown RBP17.1■□□□□ 0.33
CCDC9-205ENST00000600117 NIPBLQ6KC79 2804 aaeCLIP17.1■□□□□ 0.33
CCDC9-205ENST00000600117 FREM3P0C091 2139 aa17.09■□□□□ 0.33
CCDC9-205ENST00000600117 GSTA4O15217 222 aa17.09■□□□□ 0.33
CCDC9-205ENST00000600117 GMFGO60234 142 aa17.09■□□□□ 0.33
CCDC9-205ENST00000600117 ZIC3O60481 467 aa17.09■□□□□ 0.33
CCDC9-205ENST00000600117 PDE5AO76074 875 aa17.09■□□□□ 0.33
CCDC9-205ENST00000600117 HPNP05981 417 aa17.09■□□□□ 0.33
CCDC9-205ENST00000600117 DPP4P27487 766 aa17.09■□□□□ 0.33
CCDC9-205ENST00000600117 SRD5A2P31213 254 aa17.09■□□□□ 0.33
CCDC9-205ENST00000600117 KCNJ5P48544 419 aa17.09■□□□□ 0.33
CCDC9-205ENST00000600117 TDGF1P3P51864 188 aa17.09■□□□□ 0.33
CCDC9-205ENST00000600117 SUMO3P55854 103 aaPredicted RBP17.09■□□□□ 0.33
CCDC9-205ENST00000600117 DSCR4P56555 118 aaPredicted RBP17.09■□□□□ 0.33
CCDC9-205ENST00000600117 DUSP7Q16829 419 aa17.09■□□□□ 0.33
CCDC9-205ENST00000600117 PGM2L1Q6PCE3 622 aa17.09■□□□□ 0.33
CCDC9-205ENST00000600117 SMYD1Q8NB12 490 aa17.09■□□□□ 0.33
CCDC9-205ENST00000600117 FAM83FQ8NEG4 500 aaPredicted RBP17.09■□□□□ 0.33
CCDC9-205ENST00000600117 OR5W2Q8NH69 310 aa17.09■□□□□ 0.33
CCDC9-205ENST00000600117 GPR119Q8TDV5 335 aa17.09■□□□□ 0.33
CCDC9-205ENST00000600117 THTPAQ9BU02 230 aa17.09■□□□□ 0.33
CCDC9-205ENST00000600117 PINK1Q9BXM7 581 aa17.09■□□□□ 0.33
CCDC9-205ENST00000600117 CADM1Q9BY67 442 aaKnown RBP17.09■□□□□ 0.33
CCDC9-205ENST00000600117 DEFB127Q9H1M4 99 aa17.09■□□□□ 0.33
CCDC9-205ENST00000600117 ACKR4Q9NPB9 350 aa17.09■□□□□ 0.33
CCDC9-205ENST00000600117 OLAHQ9NV23 265 aa17.09■□□□□ 0.33
CCDC9-205ENST00000600117 MRPS18CQ9Y3D5 142 aaKnown RBP17.09■□□□□ 0.33
CCDC9-205ENST00000600117 LIPGQ9Y5X9 500 aa17.09■□□□□ 0.33
CCDC9-205ENST00000600117 PKDREJQ9NTG1 2253 aa17.09■□□□□ 0.33
CCDC9-205ENST00000600117 NPIPA5E9PKD4 350 aa17.08■□□□□ 0.32
CCDC9-205ENST00000600117 GSC2O15499 205 aa17.08■□□□□ 0.32
CCDC9-205ENST00000600117 CYP7B1O75881 506 aa17.08■□□□□ 0.32
CCDC9-205ENST00000600117 DNAJC8O75937 253 aaPredicted RBP17.08■□□□□ 0.32
CCDC9-205ENST00000600117 IGHG3P01860 377 aa17.08■□□□□ 0.32
CCDC9-205ENST00000600117 RASSF2P50749 326 aa17.08■□□□□ 0.32
CCDC9-205ENST00000600117 SLC10A1Q14973 349 aa17.08■□□□□ 0.32
CCDC9-205ENST00000600117 LRRC23Q53EV4 343 aaPredicted RBP17.08■□□□□ 0.32
CCDC9-205ENST00000600117 EIPR1Q53HC9 387 aa17.08■□□□□ 0.32
CCDC9-205ENST00000600117 GLYATQ6IB77 296 aa17.08■□□□□ 0.32
CCDC9-205ENST00000600117 ARSKQ6UWY0 536 aa17.08■□□□□ 0.32
CCDC9-205ENST00000600117 TMCO5AQ8N6Q1 288 aa17.08■□□□□ 0.32
CCDC9-205ENST00000600117 PCDHAC1Q9H158 963 aa17.08■□□□□ 0.32
CCDC9-205ENST00000600117 LRMDAQ9H2I8 198 aa17.08■□□□□ 0.32
CCDC9-205ENST00000600117 PTGES2Q9H7Z7 377 aa17.08■□□□□ 0.32
CCDC9-205ENST00000600117 PLSCR2Q9NRY7 297 aa17.08■□□□□ 0.32
CCDC9-205ENST00000600117 AGPAT4Q9NRZ5 378 aa17.08■□□□□ 0.32
CCDC9-205ENST00000600117 NPIPA1Q9UND3 350 aa17.08■□□□□ 0.32
CCDC9-205ENST00000600117 SNX13Q9Y5W8 968 aa17.08■□□□□ 0.32
CCDC9-205ENST00000600117 ZNF407Q9C0G0 2248 aa17.07■□□□□ 0.32
CCDC9-205ENST00000600117 SYT5O00445 386 aa17.07■□□□□ 0.32
CCDC9-205ENST00000600117 AP3D1O14617 1153 aa17.07■□□□□ 0.32
CCDC9-205ENST00000600117 ARPC2O15144 300 aa17.07■□□□□ 0.32
CCDC9-205ENST00000600117 FRS3O43559 492 aa17.07■□□□□ 0.32
CCDC9-205ENST00000600117 LGI1O95970 557 aa17.07■□□□□ 0.32
CCDC9-205ENST00000600117 PRG2P13727 222 aa17.07■□□□□ 0.32
CCDC9-205ENST00000600117 ME2P23368 584 aa17.07■□□□□ 0.32
CCDC9-205ENST00000600117 ACAA2P42765 397 aaKnown RBP17.07■□□□□ 0.32
CCDC9-205ENST00000600117 CCR4P51679 360 aa17.07■□□□□ 0.32
CCDC9-205ENST00000600117 PER3P56645 1201 aa17.07■□□□□ 0.32
CCDC9-205ENST00000600117 EPS8Q12929 822 aa17.07■□□□□ 0.32
CCDC9-205ENST00000600117 BNIP2Q12982 314 aa17.07■□□□□ 0.32
CCDC9-205ENST00000600117 GANABQ14697 944 aaKnown RBP17.07■□□□□ 0.32
CCDC9-205ENST00000600117 TOMM34Q15785 309 aaPredicted RBP17.07■□□□□ 0.32
CCDC9-205ENST00000600117 TMEM44Q2T9K0 475 aa17.07■□□□□ 0.32
CCDC9-205ENST00000600117 PLPPR5Q32ZL2 321 aa17.07■□□□□ 0.32
CCDC9-205ENST00000600117 CYBRD1Q53TN4 286 aa17.07■□□□□ 0.32
CCDC9-205ENST00000600117 YRDCQ86U90 279 aaKnown RBP17.07■□□□□ 0.32
CCDC9-205ENST00000600117 ZNF440Q8IYI8 595 aa17.07■□□□□ 0.32
CCDC9-205ENST00000600117 BHLHE22Q8NFJ8 381 aaPredicted RBP17.07■□□□□ 0.32
CCDC9-205ENST00000600117 SLC35B4Q969S0 331 aa17.07■□□□□ 0.32
CCDC9-205ENST00000600117 GPR137Q96N19 417 aa17.07■□□□□ 0.32
CCDC9-205ENST00000600117 NPAS1Q99742 590 aa17.07■□□□□ 0.32
CCDC9-205ENST00000600117 WFDC6Q9BQY6 131 aa17.07■□□□□ 0.32
CCDC9-205ENST00000600117 SLC6A15Q9H2J7 730 aa17.07■□□□□ 0.32
CCDC9-205ENST00000600117 ARMC7Q9H6L4 198 aa17.07■□□□□ 0.32
CCDC9-205ENST00000600117 GORASP2Q9H8Y8 452 aa17.07■□□□□ 0.32
CCDC9-205ENST00000600117 MED17Q9NVC6 651 aa17.07■□□□□ 0.32
CCDC9-205ENST00000600117 MAGEL2Q9UJ55 1249 aa17.07■□□□□ 0.32
CCDC9-205ENST00000600117 DKKL1Q9UK85 242 aa17.07■□□□□ 0.32
CCDC9-205ENST00000600117 ETV2O00321 342 aaPredicted RBP17.06■□□□□ 0.32
CCDC9-205ENST00000600117 CDC40O60508 579 aaKnown RBP eCLIP17.06■□□□□ 0.32
CCDC9-205ENST00000600117 TRAPPC6AO75865 159 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms