RNA–Protein interactions for RNA: ENST00000597618.5

TRIM28-210, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-210ENST00000597618 ZNF775Q96BV0 537 aaPredicted RBP8.89□□□□□ -0.99
TRIM28-210ENST00000597618 MRGPRX4Q96LA9 322 aa8.89□□□□□ -0.99
TRIM28-210ENST00000597618 MS4A4EQ96PG1 132 aa8.89□□□□□ -0.99
TRIM28-210ENST00000597618 SORCS2Q96PQ0 1159 aa8.89□□□□□ -0.99
TRIM28-210ENST00000597618 ZNF382Q96SR6 550 aa8.89□□□□□ -0.99
TRIM28-210ENST00000597618 BPESC1Q9GZL8 116 aa8.89□□□□□ -0.99
TRIM28-210ENST00000597618 IQCGQ9H095 443 aaKnown RBP8.89□□□□□ -0.99
TRIM28-210ENST00000597618 TAS2R16Q9NYV7 291 aa8.89□□□□□ -0.99
TRIM28-210ENST00000597618 GRHL1Q9NZI5 618 aa8.89□□□□□ -0.99
TRIM28-210ENST00000597618 WBP11Q9Y2W2 641 aaKnown RBP8.89□□□□□ -0.99
TRIM28-210ENST00000597618 TRAF6Q9Y4K3 522 aa8.89□□□□□ -0.99
TRIM28-210ENST00000597618 A0A1W2PNR3 127 aa8.88□□□□□ -0.99
TRIM28-210ENST00000597618 A0A1W2PR80 420 aa8.88□□□□□ -0.99
TRIM28-210ENST00000597618 ZSCAN12O43309 604 aa8.88□□□□□ -0.99
TRIM28-210ENST00000597618 IGHV3-9P01782 118 aa8.88□□□□□ -0.99
TRIM28-210ENST00000597618 ACP2P11117 423 aa8.88□□□□□ -0.99
TRIM28-210ENST00000597618 PRKCAP17252 672 aa8.88□□□□□ -0.99
TRIM28-210ENST00000597618 GPC1P35052 558 aa8.88□□□□□ -0.99
TRIM28-210ENST00000597618 MAGEA12P43365 314 aa8.88□□□□□ -0.99
TRIM28-210ENST00000597618 HTR6P50406 440 aa8.88□□□□□ -0.99
TRIM28-210ENST00000597618 P2RX1P51575 399 aa8.88□□□□□ -0.99
TRIM28-210ENST00000597618 CHN2P52757 468 aa8.88□□□□□ -0.99
TRIM28-210ENST00000597618 PLTPP55058 493 aa8.88□□□□□ -0.99
TRIM28-210ENST00000597618 CAV1Q03135 178 aa8.88□□□□□ -0.99
TRIM28-210ENST00000597618 BTKQ06187 659 aa8.88□□□□□ -0.99
TRIM28-210ENST00000597618 HSPB3Q12988 150 aa8.88□□□□□ -0.99
TRIM28-210ENST00000597618 SCGB2A2Q13296 93 aa8.88□□□□□ -0.99
TRIM28-210ENST00000597618 MLC1Q15049 377 aa8.88□□□□□ -0.99
TRIM28-210ENST00000597618 TRADDQ15628 312 aa8.88□□□□□ -0.99
TRIM28-210ENST00000597618 SWI5Q1ZZU3 235 aa8.88□□□□□ -0.99
TRIM28-210ENST00000597618 C3orf33Q6P1S2 294 aa8.88□□□□□ -0.99
TRIM28-210ENST00000597618 ZNF551Q7Z340 670 aaPredicted RBP8.88□□□□□ -0.99
TRIM28-210ENST00000597618 SZRD1Q7Z422 152 aa8.88□□□□□ -0.99
TRIM28-210ENST00000597618 COX18Q8N8Q8 333 aa8.88□□□□□ -0.99
TRIM28-210ENST00000597618 LINC01356Q8N9X3 169 aa8.88□□□□□ -0.99
TRIM28-210ENST00000597618 ZNF527Q8NB42 609 aa8.88□□□□□ -0.99
TRIM28-210ENST00000597618 PHOSPHO1Q8TCT1 267 aa8.88□□□□□ -0.99
TRIM28-210ENST00000597618 HPS1Q92902 700 aa8.88□□□□□ -0.99
TRIM28-210ENST00000597618 APH1AQ96BI3 265 aa8.88□□□□□ -0.99
TRIM28-210ENST00000597618 ARL8AQ96BM9 186 aa8.88□□□□□ -0.99
TRIM28-210ENST00000597618 FBXO17Q96EF6 278 aa8.88□□□□□ -0.99
TRIM28-210ENST00000597618 SOX7Q9BT81 388 aa8.88□□□□□ -0.99
TRIM28-210ENST00000597618 OCEL1Q9H607 264 aa8.88□□□□□ -0.99
TRIM28-210ENST00000597618 ASB6Q9NWX5 421 aa8.88□□□□□ -0.99
TRIM28-210ENST00000597618 MALT1Q9UDY8 824 aa8.88□□□□□ -0.99
TRIM28-210ENST00000597618 METRNQ9UJH8 293 aa8.88□□□□□ -0.99
TRIM28-210ENST00000597618 ICAM5Q9UMF0 924 aa8.88□□□□□ -0.99
TRIM28-210ENST00000597618 STK38LQ9Y2H1 464 aa8.88□□□□□ -0.99
TRIM28-210ENST00000597618 DYSFO75923 2080 aa8.87□□□□□ -0.99
TRIM28-210ENST00000597618 IGKV3D-15A0A087WSY6 115 aa8.87□□□□□ -0.99
TRIM28-210ENST00000597618 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.87□□□□□ -0.99
TRIM28-210ENST00000597618 ATP6V1G2-DDX39BF2Z307 99 aa8.87□□□□□ -0.99
TRIM28-210ENST00000597618 H3BNH8 94 aa8.87□□□□□ -0.99
TRIM28-210ENST00000597618 PDPK1O15530 556 aa8.87□□□□□ -0.99
TRIM28-210ENST00000597618 SUPT7LO94864 414 aa8.87□□□□□ -0.99
TRIM28-210ENST00000597618 SNUPNO95149 360 aaKnown RBP8.87□□□□□ -0.99
TRIM28-210ENST00000597618 VENTXO95231 258 aa8.87□□□□□ -0.99
TRIM28-210ENST00000597618 ENO1P06733 434 aaKnown RBP8.87□□□□□ -0.99
TRIM28-210ENST00000597618 ALOX5P09917 674 aa8.87□□□□□ -0.99
TRIM28-210ENST00000597618 APEX1P27695 318 aaKnown RBP8.87□□□□□ -0.99
TRIM28-210ENST00000597618 PRKAG1P54619 331 aa8.87□□□□□ -0.99
TRIM28-210ENST00000597618 GUCY2DQ02846 1103 aa8.87□□□□□ -0.99
TRIM28-210ENST00000597618 PDK3Q15120 406 aa8.87□□□□□ -0.99
TRIM28-210ENST00000597618 DUSP5Q16690 384 aa8.87□□□□□ -0.99
TRIM28-210ENST00000597618 ZSWIM7Q19AV6 140 aa8.87□□□□□ -0.99
TRIM28-210ENST00000597618 MST1LQ2TV78 715 aa8.87□□□□□ -0.99
TRIM28-210ENST00000597618 SPDYAQ5MJ70 313 aa8.87□□□□□ -0.99
TRIM28-210ENST00000597618 C1QTNF12Q5T7M4 302 aa8.87□□□□□ -0.99
TRIM28-210ENST00000597618 ABLIM2Q6H8Q1 611 aa8.87□□□□□ -0.99
TRIM28-210ENST00000597618 CBLN3Q6UW01 205 aa8.87□□□□□ -0.99
TRIM28-210ENST00000597618 UGT2A3Q6UWM9 527 aa8.87□□□□□ -0.99
TRIM28-210ENST00000597618 RINLQ6ZS11 566 aa8.87□□□□□ -0.99
TRIM28-210ENST00000597618 SLC46A3Q7Z3Q1 461 aa8.87□□□□□ -0.99
TRIM28-210ENST00000597618 C17orf78Q8N4C9 275 aa8.87□□□□□ -0.99
TRIM28-210ENST00000597618 SLC16A11Q8NCK7 471 aa8.87□□□□□ -0.99
TRIM28-210ENST00000597618 NUP43Q8NFH3 380 aa8.87□□□□□ -0.99
TRIM28-210ENST00000597618 TOR1AIP2Q8NFQ8 470 aa8.87□□□□□ -0.99
TRIM28-210ENST00000597618 ZFP28Q8NHY6 868 aa8.87□□□□□ -0.99
TRIM28-210ENST00000597618 FAM76AQ8TAV0 307 aa8.87□□□□□ -0.99
TRIM28-210ENST00000597618 FBXO25Q8TCJ0 367 aa8.87□□□□□ -0.99
TRIM28-210ENST00000597618 GCDHQ92947 438 aaPredicted RBP8.87□□□□□ -0.99
TRIM28-210ENST00000597618 GIMAP5Q96F15 307 aa8.87□□□□□ -0.99
TRIM28-210ENST00000597618 MUS81Q96NY9 551 aa8.87□□□□□ -0.99
TRIM28-210ENST00000597618 C1QTNF6Q9BXI9 259 aa8.87□□□□□ -0.99
TRIM28-210ENST00000597618 CARD8Q9Y2G2 431 aa8.87□□□□□ -0.99
TRIM28-210ENST00000597618 AMDHD2Q9Y303 409 aa8.87□□□□□ -0.99
TRIM28-210ENST00000597618 NOSIPQ9Y314 301 aaKnown RBP8.87□□□□□ -0.99
TRIM28-210ENST00000597618 SAR1BQ9Y6B6 198 aa8.87□□□□□ -0.99
TRIM28-210ENST00000597618 NPIPA5A0A0B4J1W7 369 aa8.86□□□□□ -0.99
TRIM28-210ENST00000597618 SERTM1A2A2V5 107 aa8.86□□□□□ -0.99
TRIM28-210ENST00000597618 TMEM89A2RUT3 159 aa8.86□□□□□ -0.99
TRIM28-210ENST00000597618 LRP5LA4QPB2 252 aa8.86□□□□□ -0.99
TRIM28-210ENST00000597618 FAM157AC9JC47 383 aa8.86□□□□□ -0.99
TRIM28-210ENST00000597618 NPIPA7E9PJI5 369 aa8.86□□□□□ -0.99
TRIM28-210ENST00000597618 ETV2O00321 342 aaPredicted RBP8.86□□□□□ -0.99
TRIM28-210ENST00000597618 GPR171O14626 319 aa8.86□□□□□ -0.99
TRIM28-210ENST00000597618 OIP5O43482 229 aa8.86□□□□□ -0.99
TRIM28-210ENST00000597618 H6PDO95479 791 aa8.86□□□□□ -0.99
TRIM28-210ENST00000597618 NPIPA8P0DM63 369 aa8.86□□□□□ -0.99
TRIM28-210ENST00000597618 ATP6V1C1P21283 382 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms