RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 EMC9Q9Y3B6 208 aa13.56□□□□□ -0.24
TGFB1-202ENST00000597453 NPIPA5A0A0B4J1W7 369 aa13.55□□□□□ -0.24
TGFB1-202ENST00000597453 A0A1W2PQD3 144 aa13.55□□□□□ -0.24
TGFB1-202ENST00000597453 NPIPA7E9PJI5 369 aa13.55□□□□□ -0.24
TGFB1-202ENST00000597453 OIP5O43482 229 aa13.55□□□□□ -0.24
TGFB1-202ENST00000597453 PLGP00747 810 aaPredicted RBP13.55□□□□□ -0.24
TGFB1-202ENST00000597453 PGRP06401 933 aa13.55□□□□□ -0.24
TGFB1-202ENST00000597453 KRT16P08779 473 aa13.55□□□□□ -0.24
TGFB1-202ENST00000597453 LINGO3P0C6S8 592 aa13.55□□□□□ -0.24
TGFB1-202ENST00000597453 NPIPA8P0DM63 369 aa13.55□□□□□ -0.24
TGFB1-202ENST00000597453 HPGDP15428 266 aa13.55□□□□□ -0.24
TGFB1-202ENST00000597453 SHC1P29353 583 aa13.55□□□□□ -0.24
TGFB1-202ENST00000597453 IL12AP29459 219 aa13.55□□□□□ -0.24
TGFB1-202ENST00000597453 LCN1P31025 176 aa13.55□□□□□ -0.24
TGFB1-202ENST00000597453 SOAT1P35610 550 aa13.55□□□□□ -0.24
TGFB1-202ENST00000597453 MRPL19P49406 292 aaKnown RBP13.55□□□□□ -0.24
TGFB1-202ENST00000597453 POU6F2P78424 691 aaPredicted RBP13.55□□□□□ -0.24
TGFB1-202ENST00000597453 ZNF117Q03924 483 aa13.55□□□□□ -0.24
TGFB1-202ENST00000597453 LRRC74AQ0VAA2 488 aa13.55□□□□□ -0.24
TGFB1-202ENST00000597453 TP53BP2Q13625 1128 aa13.55□□□□□ -0.24
TGFB1-202ENST00000597453 ACKR1Q16570 336 aa13.55□□□□□ -0.24
TGFB1-202ENST00000597453 Q5PR19 223 aa13.55□□□□□ -0.24
TGFB1-202ENST00000597453 SHEQ5VZ18 495 aa13.55□□□□□ -0.24
TGFB1-202ENST00000597453 CDC73Q6P1J9 531 aa13.55□□□□□ -0.24
TGFB1-202ENST00000597453 BIVMQ86UB2 503 aa13.55□□□□□ -0.24
TGFB1-202ENST00000597453 ANKRD46Q86W74 232 aa13.55□□□□□ -0.24
TGFB1-202ENST00000597453 MISPQ8IVT2 679 aa13.55□□□□□ -0.24
TGFB1-202ENST00000597453 OR4A15Q8NGL6 344 aa13.55□□□□□ -0.24
TGFB1-202ENST00000597453 B4GALNT2Q8NHY0 566 aa13.55□□□□□ -0.24
TGFB1-202ENST00000597453 CHMP6Q96FZ7 201 aa13.55□□□□□ -0.24
TGFB1-202ENST00000597453 STACQ99469 402 aa13.55□□□□□ -0.24
TGFB1-202ENST00000597453 EBF4Q9BQW3 602 aa13.55□□□□□ -0.24
TGFB1-202ENST00000597453 PIGUQ9H490 435 aa13.55□□□□□ -0.24
TGFB1-202ENST00000597453 HHATLQ9HCP6 504 aa13.55□□□□□ -0.24
TGFB1-202ENST00000597453 DUSP22Q9NRW4 184 aa13.55□□□□□ -0.24
TGFB1-202ENST00000597453 GPATCH2Q9NW75 528 aa13.55□□□□□ -0.24
TGFB1-202ENST00000597453 PAQR5Q9NXK6 330 aaPredicted RBP13.55□□□□□ -0.24
TGFB1-202ENST00000597453 ZIM2Q9NZV7 527 aa13.55□□□□□ -0.24
TGFB1-202ENST00000597453 STOML1Q9UBI4 398 aa13.55□□□□□ -0.24
TGFB1-202ENST00000597453 MCTS1Q9ULC4 181 aaKnown RBP13.55□□□□□ -0.24
TGFB1-202ENST00000597453 PCDHGB4Q9UN71 923 aa13.55□□□□□ -0.24
TGFB1-202ENST00000597453 KCNE3Q9Y6H6 103 aa13.55□□□□□ -0.24
TGFB1-202ENST00000597453 FN1P02751 2386 aaKnown RBP13.55□□□□□ -0.24
TGFB1-202ENST00000597453 SMPD2O60906 423 aa13.54□□□□□ -0.24
TGFB1-202ENST00000597453 SLC22A3O75751 556 aa13.54□□□□□ -0.24
TGFB1-202ENST00000597453 SYNGR4O95473 234 aa13.54□□□□□ -0.24
TGFB1-202ENST00000597453 INHBBP09529 407 aa13.54□□□□□ -0.24
TGFB1-202ENST00000597453 CTBP2P56545 445 aa13.54□□□□□ -0.24
TGFB1-202ENST00000597453 FOXF1Q12946 379 aa13.54□□□□□ -0.24
TGFB1-202ENST00000597453 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.54□□□□□ -0.24
TGFB1-202ENST00000597453 HBMQ6B0K9 141 aa13.54□□□□□ -0.24
TGFB1-202ENST00000597453 CBLN3Q6UW01 205 aa13.54□□□□□ -0.24
TGFB1-202ENST00000597453 STAC2Q6ZMT1 411 aa13.54□□□□□ -0.24
TGFB1-202ENST00000597453 ESPNLQ6ZVH7 1005 aa13.54□□□□□ -0.24
TGFB1-202ENST00000597453 MIER2Q8N344 545 aa13.54□□□□□ -0.24
TGFB1-202ENST00000597453 OR5AK3PQ8NH89 298 aa13.54□□□□□ -0.24
TGFB1-202ENST00000597453 PIGTQ969N2 578 aa13.54□□□□□ -0.24
TGFB1-202ENST00000597453 CCDC115Q96NT0 180 aa13.54□□□□□ -0.24
TGFB1-202ENST00000597453 CCL19Q99731 98 aa13.54□□□□□ -0.24
TGFB1-202ENST00000597453 PIP5K1AQ99755 562 aa13.54□□□□□ -0.24
TGFB1-202ENST00000597453 SIKE1Q9BRV8 207 aa13.54□□□□□ -0.24
TGFB1-202ENST00000597453 ACTRT3Q9BYD9 372 aa13.54□□□□□ -0.24
TGFB1-202ENST00000597453 BTNL2Q9UIR0 455 aa13.54□□□□□ -0.24
TGFB1-202ENST00000597453 DNHD1Q96M86 4753 aa13.54□□□□□ -0.24
TGFB1-202ENST00000597453 RNF103-CHMP3A0A140T963 221 aa13.53□□□□□ -0.24
TGFB1-202ENST00000597453 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.53□□□□□ -0.24
TGFB1-202ENST00000597453 C9JVG2 144 aa13.53□□□□□ -0.24
TGFB1-202ENST00000597453 EFNA2O43921 213 aa13.53□□□□□ -0.24
TGFB1-202ENST00000597453 SOX30O94993 753 aa13.53□□□□□ -0.24
TGFB1-202ENST00000597453 IL6P05231 212 aa13.53□□□□□ -0.24
TGFB1-202ENST00000597453 NID1P14543 1247 aa13.53□□□□□ -0.24
TGFB1-202ENST00000597453 ME2P23368 584 aa13.53□□□□□ -0.24
TGFB1-202ENST00000597453 ADSLP30566 484 aaPredicted RBP13.53□□□□□ -0.24
TGFB1-202ENST00000597453 SFTPDP35247 375 aa13.53□□□□□ -0.24
TGFB1-202ENST00000597453 STX1BP61266 288 aa13.53□□□□□ -0.24
TGFB1-202ENST00000597453 IRX1P78414 480 aaPredicted RBP13.53□□□□□ -0.24
TGFB1-202ENST00000597453 LTBQ06643 244 aa13.53□□□□□ -0.24
TGFB1-202ENST00000597453 NDUFAF6Q330K2 333 aa13.53□□□□□ -0.24
TGFB1-202ENST00000597453 KLHL26Q53HC5 615 aa13.53□□□□□ -0.24
TGFB1-202ENST00000597453 ZNF771Q7L3S4 317 aaPredicted RBP13.53□□□□□ -0.24
TGFB1-202ENST00000597453 P3H2Q8IVL5 708 aa13.53□□□□□ -0.24
TGFB1-202ENST00000597453 LILRA2Q8N149 483 aa13.53□□□□□ -0.24
TGFB1-202ENST00000597453 LRRC75A-AS1Q8N1F1 130 aa13.53□□□□□ -0.24
TGFB1-202ENST00000597453 PHOSPHO1Q8TCT1 267 aa13.53□□□□□ -0.24
TGFB1-202ENST00000597453 ROBO4Q8WZ75 1007 aa13.53□□□□□ -0.24
TGFB1-202ENST00000597453 OSTF1Q92882 214 aa13.53□□□□□ -0.24
TGFB1-202ENST00000597453 ZNF524Q96C55 264 aa13.53□□□□□ -0.24
TGFB1-202ENST00000597453 KLHL15Q96M94 604 aa13.53□□□□□ -0.24
TGFB1-202ENST00000597453 OR52E6Q96RD3 313 aa13.53□□□□□ -0.24
TGFB1-202ENST00000597453 ICAM5Q9UMF0 924 aa13.53□□□□□ -0.24
TGFB1-202ENST00000597453 FAF1Q9UNN5 650 aaPredicted RBP13.53□□□□□ -0.24
TGFB1-202ENST00000597453 USF3Q68DE3 2245 aa13.53□□□□□ -0.24
TGFB1-202ENST00000597453 ABCA2Q9BZC7 2435 aa13.53□□□□□ -0.24
TGFB1-202ENST00000597453 ZANQ9Y493 2812 aa13.52□□□□□ -0.24
TGFB1-202ENST00000597453 KLF4O43474 513 aa13.52□□□□□ -0.25
TGFB1-202ENST00000597453 CPSF4O95639 269 aaKnown RBP13.52□□□□□ -0.25
TGFB1-202ENST00000597453 ATP6V1C1P21283 382 aa13.52□□□□□ -0.25
TGFB1-202ENST00000597453 FPR1P21462 350 aa13.52□□□□□ -0.25
TGFB1-202ENST00000597453 UQCRC2P22695 453 aa13.52□□□□□ -0.25
TGFB1-202ENST00000597453 AGTR1P30556 359 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms