RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 UCK2Q9BZX2 261 aa13.9□□□□□ -0.18
VRK3-207ENST00000594092 LAT2Q9GZY6 243 aa13.9□□□□□ -0.18
VRK3-207ENST00000594092 GPN2Q9H9Y4 310 aaPredicted RBP13.9□□□□□ -0.18
VRK3-207ENST00000594092 A0A0B4J2E0 115 aa13.89□□□□□ -0.19
VRK3-207ENST00000594092 A0A1B0GWA3 101 aa13.89□□□□□ -0.19
VRK3-207ENST00000594092 A0A1B0GX12 115 aa13.89□□□□□ -0.19
VRK3-207ENST00000594092 DPPA5A6NC42 116 aa13.89□□□□□ -0.19
VRK3-207ENST00000594092 A6NHS1 94 aa13.89□□□□□ -0.19
VRK3-207ENST00000594092 C17orf51A8MQB3 221 aa13.89□□□□□ -0.19
VRK3-207ENST00000594092 E9PQ18 207 aa13.89□□□□□ -0.19
VRK3-207ENST00000594092 SCO2O43819 266 aa13.89□□□□□ -0.19
VRK3-207ENST00000594092 ANGPTL1O95841 491 aa13.89□□□□□ -0.19
VRK3-207ENST00000594092 ATP6V1B1P15313 513 aa13.89□□□□□ -0.19
VRK3-207ENST00000594092 ELK4P28324 431 aa13.89□□□□□ -0.19
VRK3-207ENST00000594092 EPHA2P29317 976 aa13.89□□□□□ -0.19
VRK3-207ENST00000594092 NUP107P57740 925 aa13.89□□□□□ -0.19
VRK3-207ENST00000594092 ZNF117Q03924 483 aa13.89□□□□□ -0.19
VRK3-207ENST00000594092 CD47Q08722 323 aa13.89□□□□□ -0.19
VRK3-207ENST00000594092 APOFQ13790 326 aa13.89□□□□□ -0.19
VRK3-207ENST00000594092 RBM48Q5RL73 367 aaKnown RBP13.89□□□□□ -0.19
VRK3-207ENST00000594092 WDR88Q6ZMY6 472 aa13.89□□□□□ -0.19
VRK3-207ENST00000594092 RRM2BQ7LG56 351 aa13.89□□□□□ -0.19
VRK3-207ENST00000594092 APLFQ8IW19 511 aaPredicted RBP13.89□□□□□ -0.19
VRK3-207ENST00000594092 ARMC10Q8N2F6 343 aa13.89□□□□□ -0.19
VRK3-207ENST00000594092 TMEM255BQ8WV15 326 aa13.89□□□□□ -0.19
VRK3-207ENST00000594092 RNF138Q8WVD3 245 aa13.89□□□□□ -0.19
VRK3-207ENST00000594092 ACOT11Q8WXI4 607 aaPredicted RBP13.89□□□□□ -0.19
VRK3-207ENST00000594092 HDAC2Q92769 488 aaKnown RBP13.89□□□□□ -0.19
VRK3-207ENST00000594092 SPACA9Q96E40 222 aaPredicted RBP13.89□□□□□ -0.19
VRK3-207ENST00000594092 CDCP1Q9H5V8 836 aa13.89□□□□□ -0.19
VRK3-207ENST00000594092 DCDC2BA2VCK2 349 aa13.88□□□□□ -0.19
VRK3-207ENST00000594092 SERPINA7P05543 415 aa13.88□□□□□ -0.19
VRK3-207ENST00000594092 LINGO3P0C6S8 592 aa13.88□□□□□ -0.19
VRK3-207ENST00000594092 LIPCP11150 499 aa13.88□□□□□ -0.19
VRK3-207ENST00000594092 ENDOUP21128 410 aaKnown RBP13.88□□□□□ -0.19
VRK3-207ENST00000594092 SOX3P41225 446 aa13.88□□□□□ -0.19
VRK3-207ENST00000594092 MLF1P58340 268 aa13.88□□□□□ -0.19
VRK3-207ENST00000594092 ESRRGP62508 458 aa13.88□□□□□ -0.19
VRK3-207ENST00000594092 CHAF1BQ13112 559 aa13.88□□□□□ -0.19
VRK3-207ENST00000594092 TOP3AQ13472 1001 aaPredicted RBP13.88□□□□□ -0.19
VRK3-207ENST00000594092 RTP5Q14D33 572 aa13.88□□□□□ -0.19
VRK3-207ENST00000594092 NTRK2Q16620 822 aa13.88□□□□□ -0.19
VRK3-207ENST00000594092 MEP1AQ16819 746 aa13.88□□□□□ -0.19
VRK3-207ENST00000594092 ZNF791Q3KP31 576 aaPredicted RBP13.88□□□□□ -0.19
VRK3-207ENST00000594092 ZNF730Q6ZMV8 503 aa13.88□□□□□ -0.19
VRK3-207ENST00000594092 ZER1Q7Z7L7 766 aa13.88□□□□□ -0.19
VRK3-207ENST00000594092 RPS19BP1Q86WX3 136 aaKnown RBP13.88□□□□□ -0.19
VRK3-207ENST00000594092 CADM2Q8N3J6 435 aa13.88□□□□□ -0.19
VRK3-207ENST00000594092 TMCO5AQ8N6Q1 288 aa13.88□□□□□ -0.19
VRK3-207ENST00000594092 SH3YL1Q96HL8 342 aaPredicted RBP13.88□□□□□ -0.19
VRK3-207ENST00000594092 ADNPQ9H2P0 1102 aa13.88□□□□□ -0.19
VRK3-207ENST00000594092 YARS2Q9Y2Z4 477 aaKnown RBP13.88□□□□□ -0.19
VRK3-207ENST00000594092 A0A087WXM4 84 aa13.87□□□□□ -0.19
VRK3-207ENST00000594092 HCRTR2O43614 444 aa13.87□□□□□ -0.19
VRK3-207ENST00000594092 EIF4E2O60573 245 aaKnown RBP13.87□□□□□ -0.19
VRK3-207ENST00000594092 OR6B1O95007 311 aa13.87□□□□□ -0.19
VRK3-207ENST00000594092 OSMP13725 252 aa13.87□□□□□ -0.19
VRK3-207ENST00000594092 GGT2P36268 569 aa13.87□□□□□ -0.19
VRK3-207ENST00000594092 CCR4P51679 360 aa13.87□□□□□ -0.19
VRK3-207ENST00000594092 CTU2Q2VPK5 515 aaKnown RBP13.87□□□□□ -0.19
VRK3-207ENST00000594092 C6orf141Q5SZD1 244 aa13.87□□□□□ -0.19
VRK3-207ENST00000594092 C1orf94Q6P1W5 598 aa13.87□□□□□ -0.19
VRK3-207ENST00000594092 LSRQ86X29 649 aaPredicted RBP13.87□□□□□ -0.19
VRK3-207ENST00000594092 OR10G3Q8NGC4 313 aa13.87□□□□□ -0.19
VRK3-207ENST00000594092 RNF217Q8TC41 542 aa13.87□□□□□ -0.19
VRK3-207ENST00000594092 FBLIM1Q8WUP2 373 aa13.87□□□□□ -0.19
VRK3-207ENST00000594092 KIAA1143Q96AT1 154 aaPredicted RBP13.87□□□□□ -0.19
VRK3-207ENST00000594092 KLHDC3Q9BQ90 382 aa13.87□□□□□ -0.19
VRK3-207ENST00000594092 TUBA8Q9NY65 449 aaPredicted RBP13.87□□□□□ -0.19
VRK3-207ENST00000594092 BLOC1S6Q9UL45 172 aa13.87□□□□□ -0.19
VRK3-207ENST00000594092 TRIM64A6NGJ6 449 aa13.87□□□□□ -0.19
VRK3-207ENST00000594092 CHP2O43745 196 aa13.87□□□□□ -0.19
VRK3-207ENST00000594092 LIFP15018 202 aa13.87□□□□□ -0.19
VRK3-207ENST00000594092 ST13P50502 369 aaKnown RBP13.87□□□□□ -0.19
VRK3-207ENST00000594092 CRISP1P54107 249 aa13.87□□□□□ -0.19
VRK3-207ENST00000594092 GAS1P54826 345 aa13.87□□□□□ -0.19
VRK3-207ENST00000594092 COPZ1P61923 177 aa13.87□□□□□ -0.19
VRK3-207ENST00000594092 TUBA4AP68366 448 aa13.87□□□□□ -0.19
VRK3-207ENST00000594092 COX10Q12887 443 aa13.87□□□□□ -0.19
VRK3-207ENST00000594092 ALG10BQ5I7T1 473 aa13.87□□□□□ -0.19
VRK3-207ENST00000594092 H3F3CQ6NXT2 135 aa13.87□□□□□ -0.19
VRK3-207ENST00000594092 OPN5Q6U736 354 aa13.87□□□□□ -0.19
VRK3-207ENST00000594092 MBOAT2Q6ZWT7 520 aa13.87□□□□□ -0.19
VRK3-207ENST00000594092 PRICKLE2Q7Z3G6 844 aa13.87□□□□□ -0.19
VRK3-207ENST00000594092 MISPQ8IVT2 679 aa13.87□□□□□ -0.19
VRK3-207ENST00000594092 GNPDA2Q8TDQ7 276 aa13.87□□□□□ -0.19
VRK3-207ENST00000594092 IP6K3Q96PC2 410 aa13.87□□□□□ -0.19
VRK3-207ENST00000594092 GPA33Q99795 319 aa13.87□□□□□ -0.19
VRK3-207ENST00000594092 KRCC1Q9NPI7 259 aaPredicted RBP13.87□□□□□ -0.19
VRK3-207ENST00000594092 RPS6KB2Q9UBS0 482 aa13.87□□□□□ -0.19
VRK3-207ENST00000594092 ICAM5Q9UMF0 924 aa13.87□□□□□ -0.19
VRK3-207ENST00000594092 FREM2Q5SZK8 3169 aa13.87□□□□□ -0.19
VRK3-207ENST00000594092 PTNP21246 168 aa13.86□□□□□ -0.19
VRK3-207ENST00000594092 GSTM3P21266 225 aa13.86□□□□□ -0.19
VRK3-207ENST00000594092 CHMP24386 653 aa13.86□□□□□ -0.19
VRK3-207ENST00000594092 RPL5P46777 297 aaKnown RBP13.86□□□□□ -0.19
VRK3-207ENST00000594092 OMPP47874 163 aa13.86□□□□□ -0.19
VRK3-207ENST00000594092 SLC6A8P48029 635 aa13.86□□□□□ -0.19
VRK3-207ENST00000594092 GSSP48637 474 aa13.86□□□□□ -0.19
VRK3-207ENST00000594092 IDH2P48735 452 aaKnown RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms