RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 REM1O75628 298 aa12.14□□□□□ -0.47
VRK3-205ENST00000593919 GASTP01350 101 aa12.14□□□□□ -0.47
VRK3-205ENST00000593919 H1F0P07305 194 aaKnown RBP12.14□□□□□ -0.47
VRK3-205ENST00000593919 GKN3PP0CG01 181 aa12.14□□□□□ -0.47
VRK3-205ENST00000593919 IL12BP29460 328 aa12.14□□□□□ -0.47
VRK3-205ENST00000593919 STAT5AP42229 794 aa12.14□□□□□ -0.47
VRK3-205ENST00000593919 ZNF136P52737 540 aa12.14□□□□□ -0.47
VRK3-205ENST00000593919 TAGLNQ01995 201 aaKnown RBP12.14□□□□□ -0.47
VRK3-205ENST00000593919 FGFBP1Q14512 234 aa12.14□□□□□ -0.47
VRK3-205ENST00000593919 BTBD16Q32M84 506 aa12.14□□□□□ -0.47
VRK3-205ENST00000593919 TMEM236Q5W0B7 351 aa12.14□□□□□ -0.47
VRK3-205ENST00000593919 DESI1Q6ICB0 168 aa12.14□□□□□ -0.47
VRK3-205ENST00000593919 KLHL17Q6TDP4 642 aa12.14□□□□□ -0.47
VRK3-205ENST00000593919 PRSS48Q7RTY5 328 aa12.14□□□□□ -0.47
VRK3-205ENST00000593919 SLC34A3Q8N130 599 aa12.14□□□□□ -0.47
VRK3-205ENST00000593919 OR11G2Q8NGC1 345 aa12.14□□□□□ -0.47
VRK3-205ENST00000593919 TP53INP1Q96A56 240 aa12.14□□□□□ -0.47
VRK3-205ENST00000593919 OMA1Q96E52 524 aa12.14□□□□□ -0.47
VRK3-205ENST00000593919 PSD2Q9BQI7 771 aa12.14□□□□□ -0.47
VRK3-205ENST00000593919 COPS4Q9BT78 406 aa12.14□□□□□ -0.47
VRK3-205ENST00000593919 ZNF700Q9H0M5 742 aa12.14□□□□□ -0.47
VRK3-205ENST00000593919 ARMC7Q9H6L4 198 aa12.14□□□□□ -0.47
VRK3-205ENST00000593919 AMBNQ9NP70 447 aa12.14□□□□□ -0.47
VRK3-205ENST00000593919 ACOT13Q9NPJ3 140 aa12.14□□□□□ -0.47
VRK3-205ENST00000593919 IMPAD1Q9NX62 359 aa12.14□□□□□ -0.47
VRK3-205ENST00000593919 ZNF226Q9NYT6 803 aa12.14□□□□□ -0.47
VRK3-205ENST00000593919 TMCC3Q9ULS5 477 aa12.14□□□□□ -0.47
VRK3-205ENST00000593919 NTNG1Q9Y2I2 539 aa12.14□□□□□ -0.47
VRK3-205ENST00000593919 ZFHX4Q86UP3 3567 aa12.14□□□□□ -0.47
VRK3-205ENST00000593919 CNTRLQ7Z7A1 2325 aa12.14□□□□□ -0.47
VRK3-205ENST00000593919 MPDZO75970 2070 aa12.14□□□□□ -0.47
VRK3-205ENST00000593919 TMEM200CA6NKL6 621 aa12.14□□□□□ -0.47
VRK3-205ENST00000593919 STMND1H3BQB6 276 aa12.14□□□□□ -0.47
VRK3-205ENST00000593919 TSPAN2O60636 221 aa12.14□□□□□ -0.47
VRK3-205ENST00000593919 ICOSLGO75144 302 aa12.14□□□□□ -0.47
VRK3-205ENST00000593919 PRG2P13727 222 aa12.14□□□□□ -0.47
VRK3-205ENST00000593919 ELAVL4P26378 380 aaKnown RBP12.14□□□□□ -0.47
VRK3-205ENST00000593919 POU1F1P28069 291 aa12.14□□□□□ -0.47
VRK3-205ENST00000593919 TAS2R41P59536 307 aa12.14□□□□□ -0.47
VRK3-205ENST00000593919 RPS15P62841 145 aaKnown RBP12.14□□□□□ -0.47
VRK3-205ENST00000593919 ENTPD8Q5MY95 495 aa12.14□□□□□ -0.47
VRK3-205ENST00000593919 OR8K3Q8NH51 312 aa12.14□□□□□ -0.47
VRK3-205ENST00000593919 RHOXF1Q8NHV9 184 aa12.14□□□□□ -0.47
VRK3-205ENST00000593919 CNOT9Q92600 299 aaKnown RBP12.14□□□□□ -0.47
VRK3-205ENST00000593919 ARSGQ96EG1 525 aa12.14□□□□□ -0.47
VRK3-205ENST00000593919 MCHR1Q99705 422 aa12.14□□□□□ -0.47
VRK3-205ENST00000593919 FNDC11Q9BVV2 318 aa12.14□□□□□ -0.47
VRK3-205ENST00000593919 B3GNT4Q9C0J1 378 aa12.14□□□□□ -0.47
VRK3-205ENST00000593919 PLGRKTQ9HBL7 147 aa12.14□□□□□ -0.47
VRK3-205ENST00000593919 UBQLN4Q9NRR5 601 aa12.14□□□□□ -0.47
VRK3-205ENST00000593919 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.14□□□□□ -0.47
VRK3-205ENST00000593919 MAN2C1Q9NTJ4 1040 aa12.14□□□□□ -0.47
VRK3-205ENST00000593919 DNAJB12Q9NXW2 375 aaKnown RBP12.14□□□□□ -0.47
VRK3-205ENST00000593919 SELENONQ9NZV5 590 aa12.14□□□□□ -0.47
VRK3-205ENST00000593919 EML6Q6ZMW3 1958 aa12.13□□□□□ -0.47
VRK3-205ENST00000593919 AP3D1O14617 1153 aa12.13□□□□□ -0.47
VRK3-205ENST00000593919 RAD1O60671 282 aa12.13□□□□□ -0.47
VRK3-205ENST00000593919 ZNF354AO60765 605 aaPredicted RBP12.13□□□□□ -0.47
VRK3-205ENST00000593919 UTS2O95399 124 aa12.13□□□□□ -0.47
VRK3-205ENST00000593919 OXSR1O95747 527 aaPredicted RBP12.13□□□□□ -0.47
VRK3-205ENST00000593919 IGHEP01854 428 aa12.13□□□□□ -0.47
VRK3-205ENST00000593919 LCKP06239 509 aa12.13□□□□□ -0.47
VRK3-205ENST00000593919 CELA2AP08217 269 aa12.13□□□□□ -0.47
VRK3-205ENST00000593919 F8A1P23610 371 aa12.13□□□□□ -0.47
VRK3-205ENST00000593919 OTX2P32243 289 aa12.13□□□□□ -0.47
VRK3-205ENST00000593919 DLSTP36957 453 aa12.13□□□□□ -0.47
VRK3-205ENST00000593919 NRG3P56975 720 aa12.13□□□□□ -0.47
VRK3-205ENST00000593919 LSM3P62310 102 aaKnown RBP12.13□□□□□ -0.47
VRK3-205ENST00000593919 CSNK2BP67870 215 aa12.13□□□□□ -0.47
VRK3-205ENST00000593919 DNASE1L3Q13609 305 aa12.13□□□□□ -0.47
VRK3-205ENST00000593919 SEC23BQ15437 767 aa12.13□□□□□ -0.47
VRK3-205ENST00000593919 CTF1Q16619 201 aa12.13□□□□□ -0.47
VRK3-205ENST00000593919 C4orf46Q504U0 113 aa12.13□□□□□ -0.47
VRK3-205ENST00000593919 KLHL26Q53HC5 615 aa12.13□□□□□ -0.47
VRK3-205ENST00000593919 RANBP3LQ86VV4 465 aaPredicted RBP12.13□□□□□ -0.47
VRK3-205ENST00000593919 GRAMD2AQ8IUY3 354 aa12.13□□□□□ -0.47
VRK3-205ENST00000593919 DEPDC4Q8N2C3 294 aa12.13□□□□□ -0.47
VRK3-205ENST00000593919 ZNF527Q8NB42 609 aa12.13□□□□□ -0.47
VRK3-205ENST00000593919 SLC7A13Q8TCU3 470 aa12.13□□□□□ -0.47
VRK3-205ENST00000593919 ELP5Q8TE02 316 aa12.13□□□□□ -0.47
VRK3-205ENST00000593919 YIPF6Q96EC8 236 aa12.13□□□□□ -0.47
VRK3-205ENST00000593919 IMMP1LQ96LU5 166 aa12.13□□□□□ -0.47
VRK3-205ENST00000593919 TMUB1Q9BVT8 246 aa12.13□□□□□ -0.47
VRK3-205ENST00000593919 PSORS1C1Q9UIG5 152 aa12.13□□□□□ -0.47
VRK3-205ENST00000593919 PCSK5Q92824 1860 aa12.13□□□□□ -0.47
VRK3-205ENST00000593919 A0A1W2PQ72 361 aa12.12□□□□□ -0.47
VRK3-205ENST00000593919 A0A1W2PRQ8 180 aa12.12□□□□□ -0.47
VRK3-205ENST00000593919 ARRDC5A6NEK1 342 aa12.12□□□□□ -0.47
VRK3-205ENST00000593919 SERINC4A6NH21 518 aa12.12□□□□□ -0.47
VRK3-205ENST00000593919 C21orf140B9A014 251 aa12.12□□□□□ -0.47
VRK3-205ENST00000593919 WWP2O00308 870 aa12.12□□□□□ -0.47
VRK3-205ENST00000593919 DLL1O00548 723 aa12.12□□□□□ -0.47
VRK3-205ENST00000593919 TERTO14746 1132 aaKnown RBP12.12□□□□□ -0.47
VRK3-205ENST00000593919 MRPS14O60783 128 aaKnown RBP12.12□□□□□ -0.47
VRK3-205ENST00000593919 ADAM11O75078 769 aa12.12□□□□□ -0.47
VRK3-205ENST00000593919 ZFAND5O76080 213 aa12.12□□□□□ -0.47
VRK3-205ENST00000593919 HPGDP15428 266 aa12.12□□□□□ -0.47
VRK3-205ENST00000593919 MVKQ03426 396 aa12.12□□□□□ -0.47
VRK3-205ENST00000593919 SSPNQ14714 243 aa12.12□□□□□ -0.47
VRK3-205ENST00000593919 PTGES3Q15185 160 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms