RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 TMEFF2Q9UIK5 374 aaPredicted RBP12.33□□□□□ -0.44
VMP1-217ENST00000593168 FBXL4Q9UKA2 621 aa12.33□□□□□ -0.44
VMP1-217ENST00000593168 LRCH1Q9Y2L9 728 aa12.33□□□□□ -0.44
VMP1-217ENST00000593168 YARS2Q9Y2Z4 477 aaKnown RBP12.33□□□□□ -0.44
VMP1-217ENST00000593168 TRBV4-1A0A0J9YWV2 114 aa12.32□□□□□ -0.44
VMP1-217ENST00000593168 SH3PXD2BA1X283 911 aa12.32□□□□□ -0.44
VMP1-217ENST00000593168 CLEC18AA5D8T8 446 aa12.32□□□□□ -0.44
VMP1-217ENST00000593168 TRAPPC13A5PLN9 417 aa12.32□□□□□ -0.44
VMP1-217ENST00000593168 CPSF4LA6NMK7 179 aaKnown RBP12.32□□□□□ -0.44
VMP1-217ENST00000593168 ZNF264O43296 627 aa12.32□□□□□ -0.44
VMP1-217ENST00000593168 OR2J2O76002 312 aa12.32□□□□□ -0.44
VMP1-217ENST00000593168 CELA2AP08217 269 aa12.32□□□□□ -0.44
VMP1-217ENST00000593168 FUT4P22083 530 aa12.32□□□□□ -0.44
VMP1-217ENST00000593168 HTR2AP28223 471 aa12.32□□□□□ -0.44
VMP1-217ENST00000593168 HOXC5Q00444 222 aa12.32□□□□□ -0.44
VMP1-217ENST00000593168 MERTKQ12866 999 aa12.32□□□□□ -0.44
VMP1-217ENST00000593168 LAPTM4AQ15012 233 aa12.32□□□□□ -0.44
VMP1-217ENST00000593168 NTRK2Q16620 822 aa12.32□□□□□ -0.44
VMP1-217ENST00000593168 FGD3Q5JSP0 725 aa12.32□□□□□ -0.44
VMP1-217ENST00000593168 DESI1Q6ICB0 168 aa12.32□□□□□ -0.44
VMP1-217ENST00000593168 ZNF770Q6IQ21 691 aaPredicted RBP12.32□□□□□ -0.44
VMP1-217ENST00000593168 H3F3CQ6NXT2 135 aa12.32□□□□□ -0.44
VMP1-217ENST00000593168 ZNF613Q6PF04 617 aa12.32□□□□□ -0.44
VMP1-217ENST00000593168 BORAQ6PGQ7 559 aa12.32□□□□□ -0.44
VMP1-217ENST00000593168 CLEC18BQ6UXF7 455 aa12.32□□□□□ -0.44
VMP1-217ENST00000593168 GDF7Q7Z4P5 450 aa12.32□□□□□ -0.44
VMP1-217ENST00000593168 MISPQ8IVT2 679 aa12.32□□□□□ -0.44
VMP1-217ENST00000593168 DND1Q8IYX4 353 aaKnown RBP12.32□□□□□ -0.44
VMP1-217ENST00000593168 LSMEM1Q8N8F7 131 aa12.32□□□□□ -0.44
VMP1-217ENST00000593168 ATG16L2Q8NAA4 619 aa12.32□□□□□ -0.44
VMP1-217ENST00000593168 CLEC18CQ8NCF0 446 aa12.32□□□□□ -0.44
VMP1-217ENST00000593168 PHOSPHO1Q8TCT1 267 aa12.32□□□□□ -0.44
VMP1-217ENST00000593168 SLC7A13Q8TCU3 470 aa12.32□□□□□ -0.44
VMP1-217ENST00000593168 RNF138Q8WVD3 245 aa12.32□□□□□ -0.44
VMP1-217ENST00000593168 TFAP2CQ92754 450 aa12.32□□□□□ -0.44
VMP1-217ENST00000593168 SLC38A4Q969I6 547 aa12.32□□□□□ -0.44
VMP1-217ENST00000593168 SLC41A3Q96GZ6 507 aa12.32□□□□□ -0.44
VMP1-217ENST00000593168 RASL10BQ96S79 203 aa12.32□□□□□ -0.44
VMP1-217ENST00000593168 FEVQ99581 238 aa12.32□□□□□ -0.44
VMP1-217ENST00000593168 ADI1Q9BV57 179 aa12.32□□□□□ -0.44
VMP1-217ENST00000593168 TBL1XR1Q9BZK7 514 aa12.32□□□□□ -0.44
VMP1-217ENST00000593168 LAT2Q9GZY6 243 aa12.32□□□□□ -0.44
VMP1-217ENST00000593168 ADNPQ9H2P0 1102 aa12.32□□□□□ -0.44
VMP1-217ENST00000593168 GPN2Q9H9Y4 310 aaPredicted RBP12.32□□□□□ -0.44
VMP1-217ENST00000593168 ORC6Q9Y5N6 252 aa12.32□□□□□ -0.44
VMP1-217ENST00000593168 MRPS18BQ9Y676 258 aaKnown RBP12.32□□□□□ -0.44
VMP1-217ENST00000593168 AP4B1Q9Y6B7 739 aa12.32□□□□□ -0.44
VMP1-217ENST00000593168 LRRK2Q5S007 2527 aa12.31□□□□□ -0.44
VMP1-217ENST00000593168 H0YAE9 185 aa12.31□□□□□ -0.44
VMP1-217ENST00000593168 GTPBP1O00178 669 aaKnown RBP12.31□□□□□ -0.44
VMP1-217ENST00000593168 NDUFB5O43674 189 aa12.31□□□□□ -0.44
VMP1-217ENST00000593168 EIF4E2O60573 245 aaKnown RBP12.31□□□□□ -0.44
VMP1-217ENST00000593168 ITGA10O75578 1167 aa12.31□□□□□ -0.44
VMP1-217ENST00000593168 SNAP29O95721 258 aa12.31□□□□□ -0.44
VMP1-217ENST00000593168 THY1P04216 161 aa12.31□□□□□ -0.44
VMP1-217ENST00000593168 UBTFL6P0CB48 400 aaPredicted RBP12.31□□□□□ -0.44
VMP1-217ENST00000593168 ITGAMP11215 1152 aa12.31□□□□□ -0.44
VMP1-217ENST00000593168 UBL4AP11441 157 aa12.31□□□□□ -0.44
VMP1-217ENST00000593168 CBLP22681 906 aa12.31□□□□□ -0.44
VMP1-217ENST00000593168 IGFBP5P24593 272 aa12.31□□□□□ -0.44
VMP1-217ENST00000593168 EVI2BP34910 448 aa12.31□□□□□ -0.44
VMP1-217ENST00000593168 RNF144AP50876 292 aaPredicted RBP12.31□□□□□ -0.44
VMP1-217ENST00000593168 MLF1P58340 268 aa12.31□□□□□ -0.44
VMP1-217ENST00000593168 FOXK1P85037 733 aa12.31□□□□□ -0.44
VMP1-217ENST00000593168 KCNAB2Q13303 367 aa12.31□□□□□ -0.44
VMP1-217ENST00000593168 SKP2Q13309 424 aa12.31□□□□□ -0.44
VMP1-217ENST00000593168 SEC23BQ15437 767 aa12.31□□□□□ -0.44
VMP1-217ENST00000593168 CD226Q15762 336 aa12.31□□□□□ -0.44
VMP1-217ENST00000593168 ANKRD34AQ69YU3 496 aa12.31□□□□□ -0.44
VMP1-217ENST00000593168 JMJD6Q6NYC1 403 aaPredicted RBP12.31□□□□□ -0.44
VMP1-217ENST00000593168 PODNL1Q6PEZ8 512 aa12.31□□□□□ -0.44
VMP1-217ENST00000593168 OPN5Q6U736 354 aa12.31□□□□□ -0.44
VMP1-217ENST00000593168 DHRSXQ8N5I4 330 aa12.31□□□□□ -0.44
VMP1-217ENST00000593168 SLC5A8Q8N695 610 aa12.31□□□□□ -0.44
VMP1-217ENST00000593168 SPACA9Q96E40 222 aaPredicted RBP12.31□□□□□ -0.44
VMP1-217ENST00000593168 CDCP1Q9H5V8 836 aa12.31□□□□□ -0.44
VMP1-217ENST00000593168 CTPS2Q9NRF8 586 aa12.31□□□□□ -0.44
VMP1-217ENST00000593168 MGAT4BQ9UQ53 548 aa12.31□□□□□ -0.44
VMP1-217ENST00000593168 NTNG1Q9Y2I2 539 aa12.31□□□□□ -0.44
VMP1-217ENST00000593168 A0A087WUU8 490 aa12.3□□□□□ -0.44
VMP1-217ENST00000593168 A0A0B4J2E0 115 aa12.3□□□□□ -0.44
VMP1-217ENST00000593168 A0A1B0GX12 115 aa12.3□□□□□ -0.44
VMP1-217ENST00000593168 ADAM11O75078 769 aa12.3□□□□□ -0.44
VMP1-217ENST00000593168 LYPD3O95274 346 aa12.3□□□□□ -0.44
VMP1-217ENST00000593168 ANGPTL1O95841 491 aa12.3□□□□□ -0.44
VMP1-217ENST00000593168 ADAP00813 363 aa12.3□□□□□ -0.44
VMP1-217ENST00000593168 LINGO3P0C6S8 592 aa12.3□□□□□ -0.44
VMP1-217ENST00000593168 LIFP15018 202 aa12.3□□□□□ -0.44
VMP1-217ENST00000593168 CDH2P19022 906 aaPredicted RBP12.3□□□□□ -0.44
VMP1-217ENST00000593168 IFNGR2P38484 337 aa12.3□□□□□ -0.44
VMP1-217ENST00000593168 SLC6A8P48029 635 aa12.3□□□□□ -0.44
VMP1-217ENST00000593168 FBXW4P57775 412 aa12.3□□□□□ -0.44
VMP1-217ENST00000593168 ADARB1P78563 741 aaKnown RBP12.3□□□□□ -0.44
VMP1-217ENST00000593168 Q0VFX4 171 aa12.3□□□□□ -0.44
VMP1-217ENST00000593168 MED21Q13503 144 aa12.3□□□□□ -0.44
VMP1-217ENST00000593168 ZNF791Q3KP31 576 aaPredicted RBP12.3□□□□□ -0.44
VMP1-217ENST00000593168 SLC36A3Q495N2 470 aa12.3□□□□□ -0.44
VMP1-217ENST00000593168 C6orf52Q5T4I8 152 aa12.3□□□□□ -0.44
VMP1-217ENST00000593168 TTC23Q5W5X9 447 aa12.3□□□□□ -0.44
VMP1-217ENST00000593168 MARCH3Q86UD3 253 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms