RNA–Protein interactions for RNA: ENST00000592839.6

SF3A2-207, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-207ENST00000592839 STON2Q8WXE9 905 aa13.29□□□□□ -0.28
SF3A2-207ENST00000592839 PPP1R36Q96LQ0 422 aa13.29□□□□□ -0.28
SF3A2-207ENST00000592839 TACO1Q9BSH4 297 aaKnown RBP13.29□□□□□ -0.28
SF3A2-207ENST00000592839 BCO1Q9HAY6 547 aa13.29□□□□□ -0.28
SF3A2-207ENST00000592839 ZIM2Q9NZV7 527 aa13.29□□□□□ -0.28
SF3A2-207ENST00000592839 PROCRQ9UNN8 238 aa13.29□□□□□ -0.28
SF3A2-207ENST00000592839 EMC9Q9Y3B6 208 aa13.29□□□□□ -0.28
SF3A2-207ENST00000592839 FREM1Q5H8C1 2179 aa13.29□□□□□ -0.28
SF3A2-207ENST00000592839 NPIPA5A0A0B4J1W7 369 aa13.28□□□□□ -0.28
SF3A2-207ENST00000592839 CENPVL1A0A0U1RR11 272 aa13.28□□□□□ -0.28
SF3A2-207ENST00000592839 NPIPA7E9PJI5 369 aa13.28□□□□□ -0.28
SF3A2-207ENST00000592839 HMGN4O00479 90 aa13.28□□□□□ -0.28
SF3A2-207ENST00000592839 FAAHO00519 579 aa13.28□□□□□ -0.28
SF3A2-207ENST00000592839 SIAH2O43255 324 aa13.28□□□□□ -0.28
SF3A2-207ENST00000592839 CXCL13O43927 109 aa13.28□□□□□ -0.28
SF3A2-207ENST00000592839 ATE1O95260 518 aa13.28□□□□□ -0.28
SF3A2-207ENST00000592839 IL6P05231 212 aa13.28□□□□□ -0.28
SF3A2-207ENST00000592839 NPIPA8P0DM63 369 aa13.28□□□□□ -0.28
SF3A2-207ENST00000592839 PSMB1P20618 241 aaKnown RBP13.28□□□□□ -0.28
SF3A2-207ENST00000592839 FKBP2P26885 142 aaKnown RBP13.28□□□□□ -0.28
SF3A2-207ENST00000592839 LOXP28300 417 aaPredicted RBP13.28□□□□□ -0.28
SF3A2-207ENST00000592839 EPHA3P29320 983 aa13.28□□□□□ -0.28
SF3A2-207ENST00000592839 SHC1P29353 583 aa13.28□□□□□ -0.28
SF3A2-207ENST00000592839 AGTR1P30556 359 aa13.28□□□□□ -0.28
SF3A2-207ENST00000592839 S100A3P33764 101 aa13.28□□□□□ -0.28
SF3A2-207ENST00000592839 KHKP50053 298 aa13.28□□□□□ -0.28
SF3A2-207ENST00000592839 ART1P52961 327 aa13.28□□□□□ -0.28
SF3A2-207ENST00000592839 MVDP53602 400 aa13.28□□□□□ -0.28
SF3A2-207ENST00000592839 RAC3P60763 192 aa13.28□□□□□ -0.28
SF3A2-207ENST00000592839 UFM1P61960 85 aa13.28□□□□□ -0.28
SF3A2-207ENST00000592839 FAM27E3Q08E93 113 aa13.28□□□□□ -0.28
SF3A2-207ENST00000592839 TOMM34Q15785 309 aaPredicted RBP13.28□□□□□ -0.28
SF3A2-207ENST00000592839 SGCBQ16585 318 aa13.28□□□□□ -0.28
SF3A2-207ENST00000592839 HBMQ6B0K9 141 aa13.28□□□□□ -0.28
SF3A2-207ENST00000592839 GTF2IRD2BQ6EKJ0 949 aa13.28□□□□□ -0.28
SF3A2-207ENST00000592839 C3orf33Q6P1S2 294 aa13.28□□□□□ -0.28
SF3A2-207ENST00000592839 EIF3MQ7L2H7 374 aaKnown RBP13.28□□□□□ -0.28
SF3A2-207ENST00000592839 GTF2IRD2Q86UP8 949 aa13.28□□□□□ -0.28
SF3A2-207ENST00000592839 ANKRD46Q86W74 232 aa13.28□□□□□ -0.28
SF3A2-207ENST00000592839 ZNF619Q8N2I2 560 aa13.28□□□□□ -0.28
SF3A2-207ENST00000592839 SLC43A2Q8N370 569 aa13.28□□□□□ -0.28
SF3A2-207ENST00000592839 TRIML2Q8N7C3 387 aa13.28□□□□□ -0.28
SF3A2-207ENST00000592839 CNEP1R1Q8N9A8 125 aa13.28□□□□□ -0.28
SF3A2-207ENST00000592839 ANKRD42Q8N9B4 389 aa13.28□□□□□ -0.28
SF3A2-207ENST00000592839 FBXO27Q8NI29 283 aa13.28□□□□□ -0.28
SF3A2-207ENST00000592839 SLC25A43Q8WUT9 341 aaPredicted RBP13.28□□□□□ -0.28
SF3A2-207ENST00000592839 NRGNQ92686 78 aa13.28□□□□□ -0.28
SF3A2-207ENST00000592839 ROPN1LQ96C74 230 aa13.28□□□□□ -0.28
SF3A2-207ENST00000592839 C7orf26Q96N11 449 aa13.28□□□□□ -0.28
SF3A2-207ENST00000592839 TRNT1Q96Q11 434 aaKnown RBP13.28□□□□□ -0.28
SF3A2-207ENST00000592839 SLC35A5Q9BS91 424 aa13.28□□□□□ -0.28
SF3A2-207ENST00000592839 OPN3Q9H1Y3 402 aaPredicted RBP13.28□□□□□ -0.28
SF3A2-207ENST00000592839 MANSC1Q9H8J5 431 aa13.28□□□□□ -0.28
SF3A2-207ENST00000592839 TIGARQ9NQ88 270 aa13.28□□□□□ -0.28
SF3A2-207ENST00000592839 KLHL13Q9P2N7 655 aa13.28□□□□□ -0.28
SF3A2-207ENST00000592839 WDR45Q9Y484 360 aa13.28□□□□□ -0.28
SF3A2-207ENST00000592839 GMEB1Q9Y692 573 aa13.28□□□□□ -0.28
SF3A2-207ENST00000592839 DSPPQ9NZW4 1301 aa13.28□□□□□ -0.28
SF3A2-207ENST00000592839 FLNAP21333 2647 aaKnown RBP13.27□□□□□ -0.28
SF3A2-207ENST00000592839 C16orf97H3BN30 126 aa13.27□□□□□ -0.29
SF3A2-207ENST00000592839 TNFSF11O14788 317 aa13.27□□□□□ -0.29
SF3A2-207ENST00000592839 DNPH1O43598 174 aa13.27□□□□□ -0.29
SF3A2-207ENST00000592839 SYNGR4O95473 234 aa13.27□□□□□ -0.29
SF3A2-207ENST00000592839 RAF1P04049 648 aa13.27□□□□□ -0.29
SF3A2-207ENST00000592839 POU2F1P14859 743 aa13.27□□□□□ -0.29
SF3A2-207ENST00000592839 ANXA11P50995 505 aaKnown RBP13.27□□□□□ -0.29
SF3A2-207ENST00000592839 QPRTQ15274 297 aa13.27□□□□□ -0.29
SF3A2-207ENST00000592839 MAPK14Q16539 360 aa13.27□□□□□ -0.29
SF3A2-207ENST00000592839 ATAD3BQ5T9A4 648 aa13.27□□□□□ -0.29
SF3A2-207ENST00000592839 LRRC74BQ6ZQY2 392 aa13.27□□□□□ -0.29
SF3A2-207ENST00000592839 C16orf62Q7Z3J2 963 aa13.27□□□□□ -0.29
SF3A2-207ENST00000592839 CLEC4FQ8N1N0 589 aa13.27□□□□□ -0.29
SF3A2-207ENST00000592839 ZNF610Q8N9Z0 462 aa13.27□□□□□ -0.29
SF3A2-207ENST00000592839 OSTF1Q92882 214 aa13.27□□□□□ -0.29
SF3A2-207ENST00000592839 CHMP6Q96FZ7 201 aa13.27□□□□□ -0.29
SF3A2-207ENST00000592839 WFIKKN1Q96NZ8 548 aa13.27□□□□□ -0.29
SF3A2-207ENST00000592839 TMUB1Q9BVT8 246 aa13.27□□□□□ -0.29
SF3A2-207ENST00000592839 SLC38A1Q9H2H9 487 aa13.27□□□□□ -0.29
SF3A2-207ENST00000592839 WDR55Q9H6Y2 383 aaPredicted RBP13.27□□□□□ -0.29
SF3A2-207ENST00000592839 ACER3Q9NUN7 267 aa13.27□□□□□ -0.29
SF3A2-207ENST00000592839 TMEM45AQ9NWC5 275 aa13.27□□□□□ -0.29
SF3A2-207ENST00000592839 NKIRAS1Q9NYS0 192 aa13.27□□□□□ -0.29
SF3A2-207ENST00000592839 ZNF226Q9NYT6 803 aa13.27□□□□□ -0.29
SF3A2-207ENST00000592839 MARCOQ9UEW3 520 aaPredicted RBP13.27□□□□□ -0.29
SF3A2-207ENST00000592839 ING1Q9UK53 422 aaPredicted RBP13.27□□□□□ -0.29
SF3A2-207ENST00000592839 AGAP5A6NIR3 686 aa13.26□□□□□ -0.29
SF3A2-207ENST00000592839 SMNDC1O75940 238 aaKnown RBP eCLIP13.26□□□□□ -0.29
SF3A2-207ENST00000592839 TGDSO95455 350 aa13.26□□□□□ -0.29
SF3A2-207ENST00000592839 CSTAP01040 98 aa13.26□□□□□ -0.29
SF3A2-207ENST00000592839 ROS1P08922 2347 aa13.26□□□□□ -0.29
SF3A2-207ENST00000592839 OR12D1P0DN82 309 aa13.26□□□□□ -0.29
SF3A2-207ENST00000592839 HOXB9P17482 250 aaPredicted RBP13.26□□□□□ -0.29
SF3A2-207ENST00000592839 CPOXP36551 454 aa13.26□□□□□ -0.29
SF3A2-207ENST00000592839 CLK1P49759 484 aaKnown RBP13.26□□□□□ -0.29
SF3A2-207ENST00000592839 MAP2K6P52564 334 aa13.26□□□□□ -0.29
SF3A2-207ENST00000592839 CARD18P57730 90 aa13.26□□□□□ -0.29
SF3A2-207ENST00000592839 IRX1P78414 480 aaPredicted RBP13.26□□□□□ -0.29
SF3A2-207ENST00000592839 PDK3Q15120 406 aa13.26□□□□□ -0.29
SF3A2-207ENST00000592839 KRTAP21-3Q3LHN1 58 aa13.26□□□□□ -0.29
SF3A2-207ENST00000592839 STAC2Q6ZMT1 411 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms