RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 C7orf72A4D263 438 aa9.07□□□□□ -0.96
BRCA1-227ENST00000591849 HNRNPCL2B2RXH8 293 aa9.07□□□□□ -0.96
BRCA1-227ENST00000591849 HNRNPCL3B7ZW38 293 aa9.07□□□□□ -0.96
BRCA1-227ENST00000591849 TNFSF11O14788 317 aa9.07□□□□□ -0.96
BRCA1-227ENST00000591849 CXCL13O43927 109 aa9.07□□□□□ -0.96
BRCA1-227ENST00000591849 HNRNPCL1O60812 293 aaKnown RBP9.07□□□□□ -0.96
BRCA1-227ENST00000591849 SMNDC1O75940 238 aaKnown RBP eCLIP9.07□□□□□ -0.96
BRCA1-227ENST00000591849 TGM6O95932 706 aa9.07□□□□□ -0.96
BRCA1-227ENST00000591849 CHRM4P08173 479 aa9.07□□□□□ -0.96
BRCA1-227ENST00000591849 HNRNPCL4P0DMR1 293 aa9.07□□□□□ -0.96
BRCA1-227ENST00000591849 TFPIP10646 304 aa9.07□□□□□ -0.96
BRCA1-227ENST00000591849 FCGR2AP12318 317 aa9.07□□□□□ -0.96
BRCA1-227ENST00000591849 UQCRBP14927 111 aa9.07□□□□□ -0.96
BRCA1-227ENST00000591849 CAPN3P20807 821 aa9.07□□□□□ -0.96
BRCA1-227ENST00000591849 SLC6A8P48029 635 aa9.07□□□□□ -0.96
BRCA1-227ENST00000591849 ASCL1P50553 236 aa9.07□□□□□ -0.96
BRCA1-227ENST00000591849 ZNF136P52737 540 aa9.07□□□□□ -0.96
BRCA1-227ENST00000591849 SIRPAP78324 504 aa9.07□□□□□ -0.96
BRCA1-227ENST00000591849 MERTKQ12866 999 aa9.07□□□□□ -0.96
BRCA1-227ENST00000591849 FADDQ13158 208 aa9.07□□□□□ -0.96
BRCA1-227ENST00000591849 MYBPHQ13203 477 aa9.07□□□□□ -0.96
BRCA1-227ENST00000591849 SKP2Q13309 424 aa9.07□□□□□ -0.96
BRCA1-227ENST00000591849 NFYCQ13952 458 aa9.07□□□□□ -0.96
BRCA1-227ENST00000591849 PON3Q15166 354 aa9.07□□□□□ -0.96
BRCA1-227ENST00000591849 TOMM34Q15785 309 aaPredicted RBP9.07□□□□□ -0.96
BRCA1-227ENST00000591849 MAPK14Q16539 360 aa9.07□□□□□ -0.96
BRCA1-227ENST00000591849 TMEM44Q2T9K0 475 aa9.07□□□□□ -0.96
BRCA1-227ENST00000591849 TMEM176BQ3YBM2 270 aaPredicted RBP9.07□□□□□ -0.96
BRCA1-227ENST00000591849 MMEL1Q495T6 779 aa9.07□□□□□ -0.96
BRCA1-227ENST00000591849 LIN52Q52LA3 116 aa9.07□□□□□ -0.96
BRCA1-227ENST00000591849 PAGE3Q5JUK9 113 aa9.07□□□□□ -0.96
BRCA1-227ENST00000591849 GCNT6Q5T4J0 391 aa9.07□□□□□ -0.96
BRCA1-227ENST00000591849 GTF2IRD2BQ6EKJ0 949 aa9.07□□□□□ -0.96
BRCA1-227ENST00000591849 PLXDC2Q6UX71 529 aa9.07□□□□□ -0.96
BRCA1-227ENST00000591849 ESPNLQ6ZVH7 1005 aa9.07□□□□□ -0.96
BRCA1-227ENST00000591849 GTF2IRD2Q86UP8 949 aa9.07□□□□□ -0.96
BRCA1-227ENST00000591849 CMIPQ8IY22 773 aa9.07□□□□□ -0.96
BRCA1-227ENST00000591849 GCNT2Q8N0V5 402 aa9.07□□□□□ -0.96
BRCA1-227ENST00000591849 NAXEQ8NCW5 288 aa9.07□□□□□ -0.96
BRCA1-227ENST00000591849 OR52P1PQ8NH57 321 aa9.07□□□□□ -0.96
BRCA1-227ENST00000591849 OR10D3Q8NH80 312 aa9.07□□□□□ -0.96
BRCA1-227ENST00000591849 POC1BQ8TC44 478 aa9.07□□□□□ -0.96
BRCA1-227ENST00000591849 FIG4Q92562 907 aa9.07□□□□□ -0.96
BRCA1-227ENST00000591849 OSTF1Q92882 214 aa9.07□□□□□ -0.96
BRCA1-227ENST00000591849 ZG16BQ96DA0 208 aa9.07□□□□□ -0.96
BRCA1-227ENST00000591849 ARSGQ96EG1 525 aa9.07□□□□□ -0.96
BRCA1-227ENST00000591849 ZNF845Q96IR2 970 aaPredicted RBP9.07□□□□□ -0.96
BRCA1-227ENST00000591849 MRGPRX4Q96LA9 322 aa9.07□□□□□ -0.96
BRCA1-227ENST00000591849 KLHL15Q96M94 604 aa9.07□□□□□ -0.96
BRCA1-227ENST00000591849 UCN2Q96RP3 112 aa9.07□□□□□ -0.96
BRCA1-227ENST00000591849 SPOCK3Q9BQ16 436 aa9.07□□□□□ -0.96
BRCA1-227ENST00000591849 SFXN3Q9BWM7 321 aa9.07□□□□□ -0.96
BRCA1-227ENST00000591849 QRSL1Q9H0R6 528 aaKnown RBP9.07□□□□□ -0.96
BRCA1-227ENST00000591849 SLC38A1Q9H2H9 487 aa9.07□□□□□ -0.96
BRCA1-227ENST00000591849 CLCF1Q9UBD9 225 aa9.07□□□□□ -0.96
BRCA1-227ENST00000591849 ZNF175Q9Y473 711 aa9.07□□□□□ -0.96
BRCA1-227ENST00000591849 A0A0J9YW62 118 aa9.06□□□□□ -0.96
BRCA1-227ENST00000591849 CENPVL1A0A0U1RR11 272 aa9.06□□□□□ -0.96
BRCA1-227ENST00000591849 PRAMEF27A3QJZ7 478 aa9.06□□□□□ -0.96
BRCA1-227ENST00000591849 AGAP5A6NIR3 686 aa9.06□□□□□ -0.96
BRCA1-227ENST00000591849 IL18BPO95998 194 aa9.06□□□□□ -0.96
BRCA1-227ENST00000591849 CRHP06850 196 aa9.06□□□□□ -0.96
BRCA1-227ENST00000591849 TFPTP0C1Z6 253 aa9.06□□□□□ -0.96
BRCA1-227ENST00000591849 PABPC4LP0CB38 370 aaKnown RBP9.06□□□□□ -0.96
BRCA1-227ENST00000591849 PRKCAP17252 672 aa9.06□□□□□ -0.96
BRCA1-227ENST00000591849 ELK4P28324 431 aa9.06□□□□□ -0.96
BRCA1-227ENST00000591849 PGM1P36871 562 aa9.06□□□□□ -0.96
BRCA1-227ENST00000591849 IDH2P48735 452 aaKnown RBP9.06□□□□□ -0.96
BRCA1-227ENST00000591849 CTBP2P56545 445 aa9.06□□□□□ -0.96
BRCA1-227ENST00000591849 SESN3P58005 492 aa9.06□□□□□ -0.96
BRCA1-227ENST00000591849 COPZ1P61923 177 aa9.06□□□□□ -0.96
BRCA1-227ENST00000591849 FUT5Q11128 374 aa9.06□□□□□ -0.96
BRCA1-227ENST00000591849 FOXF2Q12947 444 aa9.06□□□□□ -0.96
BRCA1-227ENST00000591849 SELENBP1Q13228 472 aa9.06□□□□□ -0.96
BRCA1-227ENST00000591849 MAPRE2Q15555 327 aa9.06□□□□□ -0.96
BRCA1-227ENST00000591849 LRIF1Q5T3J3 769 aa9.06□□□□□ -0.96
BRCA1-227ENST00000591849 GDF7Q7Z4P5 450 aa9.06□□□□□ -0.96
BRCA1-227ENST00000591849 ADGRE4PQ86SQ3 457 aa9.06□□□□□ -0.96
BRCA1-227ENST00000591849 DHDDSQ86SQ9 333 aa9.06□□□□□ -0.96
BRCA1-227ENST00000591849 LUZP2Q86TE4 346 aa9.06□□□□□ -0.96
BRCA1-227ENST00000591849 KRT73Q86Y46 540 aa9.06□□□□□ -0.96
BRCA1-227ENST00000591849 KIF18BQ86Y91 864 aa9.06□□□□□ -0.96
BRCA1-227ENST00000591849 ZNF440Q8IYI8 595 aa9.06□□□□□ -0.96
BRCA1-227ENST00000591849 METTL25Q8N6Q8 603 aa9.06□□□□□ -0.96
BRCA1-227ENST00000591849 FNDC9Q8TBE3 224 aa9.06□□□□□ -0.96
BRCA1-227ENST00000591849 TSPEARQ8WU66 669 aa9.06□□□□□ -0.96
BRCA1-227ENST00000591849 SLC38A5Q8WUX1 472 aa9.06□□□□□ -0.96
BRCA1-227ENST00000591849 ST8SIA1Q92185 356 aa9.06□□□□□ -0.96
BRCA1-227ENST00000591849 CNOT9Q92600 299 aaKnown RBP9.06□□□□□ -0.96
BRCA1-227ENST00000591849 RNASE6Q93091 150 aaKnown RBP9.06□□□□□ -0.96
BRCA1-227ENST00000591849 TMEM19Q96HH6 336 aa9.06□□□□□ -0.96
BRCA1-227ENST00000591849 OR5B2Q96R09 309 aa9.06□□□□□ -0.96
BRCA1-227ENST00000591849 NPAS1Q99742 590 aa9.06□□□□□ -0.96
BRCA1-227ENST00000591849 KLHDC3Q9BQ90 382 aa9.06□□□□□ -0.96
BRCA1-227ENST00000591849 RBM24Q9BX46 236 aaKnown RBP9.06□□□□□ -0.96
BRCA1-227ENST00000591849 PIGMQ9H3S5 423 aa9.06□□□□□ -0.96
BRCA1-227ENST00000591849 ACER3Q9NUN7 267 aa9.06□□□□□ -0.96
BRCA1-227ENST00000591849 FOXD3Q9UJU5 478 aaPredicted RBP9.06□□□□□ -0.96
BRCA1-227ENST00000591849 SLC13A4Q9UKG4 626 aa9.06□□□□□ -0.96
BRCA1-227ENST00000591849 IFT52Q9Y366 437 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms