RNA–Protein interactions for RNA: ENST00000589054.5

NEDD4L-225, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 3 BASIC

Gene NEDD4L, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-225ENST00000589054 PDZK1Q5T2W1 519 aa18.94■□□□□ 0.62
NEDD4L-225ENST00000589054 SFRP5Q5T4F7 317 aa18.94■□□□□ 0.62
NEDD4L-225ENST00000589054 ZC3HAV1Q7Z2W4 902 aaKnown RBP18.94■□□□□ 0.62
NEDD4L-225ENST00000589054 ZNF614Q8N883 585 aa18.94■□□□□ 0.62
NEDD4L-225ENST00000589054 SFXN5Q8TD22 340 aa18.94■□□□□ 0.62
NEDD4L-225ENST00000589054 ZFP90Q8TF47 636 aa18.94■□□□□ 0.62
NEDD4L-225ENST00000589054 ZNF75CPQ92670 426 aaPredicted RBP18.94■□□□□ 0.62
NEDD4L-225ENST00000589054 CPNE4Q96A23 557 aaPredicted RBP18.94■□□□□ 0.62
NEDD4L-225ENST00000589054 MDFIQ99750 246 aa18.94■□□□□ 0.62
NEDD4L-225ENST00000589054 DUSP26Q9BV47 211 aa18.94■□□□□ 0.62
NEDD4L-225ENST00000589054 HOXD1Q9GZZ0 328 aa18.94■□□□□ 0.62
NEDD4L-225ENST00000589054 PRSS50Q9UI38 385 aa18.94■□□□□ 0.62
NEDD4L-225ENST00000589054 FAF1Q9UNN5 650 aaPredicted RBP18.94■□□□□ 0.62
NEDD4L-225ENST00000589054 LAMP3Q9UQV4 416 aa18.94■□□□□ 0.62
NEDD4L-225ENST00000589054 GPC6Q9Y625 555 aaPredicted RBP18.94■□□□□ 0.62
NEDD4L-225ENST00000589054 GTPBP1O00178 669 aaKnown RBP18.93■□□□□ 0.62
NEDD4L-225ENST00000589054 TYROBPO43914 113 aa18.93■□□□□ 0.62
NEDD4L-225ENST00000589054 DNAJA2O60884 412 aa18.93■□□□□ 0.62
NEDD4L-225ENST00000589054 PRKD3O94806 890 aa18.93■□□□□ 0.62
NEDD4L-225ENST00000589054 YES1P07947 543 aa18.93■□□□□ 0.62
NEDD4L-225ENST00000589054 SUMO3P55854 103 aaPredicted RBP18.93■□□□□ 0.62
NEDD4L-225ENST00000589054 PHC1P78364 1004 aa18.93■□□□□ 0.62
NEDD4L-225ENST00000589054 QPRTQ15274 297 aa18.93■□□□□ 0.62
NEDD4L-225ENST00000589054 MAPK14Q16539 360 aa18.93■□□□□ 0.62
NEDD4L-225ENST00000589054 TMEM201Q5SNT2 666 aa18.93■□□□□ 0.62
NEDD4L-225ENST00000589054 NCMAPQ5T1S8 102 aa18.93■□□□□ 0.62
NEDD4L-225ENST00000589054 GTF2IRD2BQ6EKJ0 949 aa18.93■□□□□ 0.62
NEDD4L-225ENST00000589054 OR4F3Q6IEY1 312 aa18.93■□□□□ 0.62
NEDD4L-225ENST00000589054 GTF2IRD2Q86UP8 949 aa18.93■□□□□ 0.62
NEDD4L-225ENST00000589054 STK32CQ86UX6 486 aa18.93■□□□□ 0.62
NEDD4L-225ENST00000589054 OR5W2Q8NH69 310 aa18.93■□□□□ 0.62
NEDD4L-225ENST00000589054 TMEM171Q8WVE6 324 aa18.93■□□□□ 0.62
NEDD4L-225ENST00000589054 PSD2Q9BQI7 771 aa18.93■□□□□ 0.62
NEDD4L-225ENST00000589054 BHLHE41Q9C0J9 482 aaPredicted RBP18.93■□□□□ 0.62
NEDD4L-225ENST00000589054 C20orf27Q9GZN8 174 aa18.93■□□□□ 0.62
NEDD4L-225ENST00000589054 ADAM21Q9UKJ8 722 aa18.93■□□□□ 0.62
NEDD4L-225ENST00000589054 HIVEP2P31629 2446 aa18.93■□□□□ 0.62
NEDD4L-225ENST00000589054 DPRXA6NFQ7 191 aa18.92■□□□□ 0.62
NEDD4L-225ENST00000589054 FAM171A2A8MVW0 826 aa18.92■□□□□ 0.62
NEDD4L-225ENST00000589054 OVOL3O00110 214 aa18.92■□□□□ 0.62
NEDD4L-225ENST00000589054 SMAD9O15198 467 aaKnown RBP18.92■□□□□ 0.62
NEDD4L-225ENST00000589054 SCN2BO60939 215 aa18.92■□□□□ 0.62
NEDD4L-225ENST00000589054 SOX30O94993 753 aa18.92■□□□□ 0.62
NEDD4L-225ENST00000589054 DANCRP0C864 163 aa18.92■□□□□ 0.62
NEDD4L-225ENST00000589054 PRPS1L1P21108 318 aa18.92■□□□□ 0.62
NEDD4L-225ENST00000589054 RPL3P39023 403 aaKnown RBP18.92■□□□□ 0.62
NEDD4L-225ENST00000589054 ATP5J2P56134 94 aa18.92■□□□□ 0.62
NEDD4L-225ENST00000589054 PLAURQ03405 335 aa18.92■□□□□ 0.62
NEDD4L-225ENST00000589054 SKP2Q13309 424 aa18.92■□□□□ 0.62
NEDD4L-225ENST00000589054 TNK1Q13470 666 aa18.92■□□□□ 0.62
NEDD4L-225ENST00000589054 RNPS1Q15287 305 aaKnown RBP18.92■□□□□ 0.62
NEDD4L-225ENST00000589054 LSM12Q3MHD2 195 aaKnown RBP18.92■□□□□ 0.62
NEDD4L-225ENST00000589054 C6orf120Q7Z4R8 191 aa18.92■□□□□ 0.62
NEDD4L-225ENST00000589054 ZNF527Q8NB42 609 aa18.92■□□□□ 0.62
NEDD4L-225ENST00000589054 MAPK1IP1LQ8NDC0 245 aa18.92■□□□□ 0.62
NEDD4L-225ENST00000589054 STEAP2Q8NFT2 490 aa18.92■□□□□ 0.62
NEDD4L-225ENST00000589054 TUBGCP3Q96CW5 907 aa18.92■□□□□ 0.62
NEDD4L-225ENST00000589054 PKNOX2Q96KN3 472 aa18.92■□□□□ 0.62
NEDD4L-225ENST00000589054 MRGPRX4Q96LA9 322 aa18.92■□□□□ 0.62
NEDD4L-225ENST00000589054 ZNF300Q96RE9 604 aaPredicted RBP18.92■□□□□ 0.62
NEDD4L-225ENST00000589054 THUMPD3Q9BV44 507 aaKnown RBP18.92■□□□□ 0.62
NEDD4L-225ENST00000589054 CADP27708 2225 aa18.92■□□□□ 0.62
NEDD4L-225ENST00000589054 SERINC4A6NH21 518 aa18.91■□□□□ 0.62
NEDD4L-225ENST00000589054 CFLARO15519 480 aa18.91■□□□□ 0.62
NEDD4L-225ENST00000589054 ZNF264O43296 627 aa18.91■□□□□ 0.62
NEDD4L-225ENST00000589054 UGT2B17O75795 530 aa18.91■□□□□ 0.62
NEDD4L-225ENST00000589054 PABPC4LP0CB38 370 aaKnown RBP18.91■□□□□ 0.62
NEDD4L-225ENST00000589054 MATN1P21941 496 aa18.91■□□□□ 0.62
NEDD4L-225ENST00000589054 CLDN8P56748 225 aa18.91■□□□□ 0.62
NEDD4L-225ENST00000589054 C21orf58P58505 322 aa18.91■□□□□ 0.62
NEDD4L-225ENST00000589054 GPR68Q15743 365 aa18.91■□□□□ 0.62
NEDD4L-225ENST00000589054 ZNF141Q15928 474 aa18.91■□□□□ 0.62
NEDD4L-225ENST00000589054 PGS1Q32NB8 556 aa18.91■□□□□ 0.62
NEDD4L-225ENST00000589054 TIGD2Q4W5G0 525 aa18.91■□□□□ 0.62
NEDD4L-225ENST00000589054 ADAM5Q6NVV9 412 aa18.91■□□□□ 0.62
NEDD4L-225ENST00000589054 RIBC1Q8N443 379 aaPredicted RBP18.91■□□□□ 0.62
NEDD4L-225ENST00000589054 ZG16BQ96DA0 208 aa18.91■□□□□ 0.62
NEDD4L-225ENST00000589054 PPP1R36Q96LQ0 422 aa18.91■□□□□ 0.62
NEDD4L-225ENST00000589054 BCO1Q9HAY6 547 aa18.91■□□□□ 0.62
NEDD4L-225ENST00000589054 TIGARQ9NQ88 270 aa18.91■□□□□ 0.62
NEDD4L-225ENST00000589054 ATAD3AQ9NVI7 634 aa18.91■□□□□ 0.62
NEDD4L-225ENST00000589054 MKLN1Q9UL63 735 aa18.91■□□□□ 0.62
NEDD4L-225ENST00000589054 PRAMEF27A3QJZ7 478 aa18.9■□□□□ 0.62
NEDD4L-225ENST00000589054 CLOCKO15516 846 aa18.9■□□□□ 0.62
NEDD4L-225ENST00000589054 EIF4E2O60573 245 aaKnown RBP18.9■□□□□ 0.62
NEDD4L-225ENST00000589054 UBL4AP11441 157 aa18.9■□□□□ 0.62
NEDD4L-225ENST00000589054 NTF4P34130 210 aa18.9■□□□□ 0.62
NEDD4L-225ENST00000589054 SOAT1P35610 550 aa18.9■□□□□ 0.62
NEDD4L-225ENST00000589054 CCR4P51679 360 aa18.9■□□□□ 0.62
NEDD4L-225ENST00000589054 SESN3P58005 492 aa18.9■□□□□ 0.62
NEDD4L-225ENST00000589054 RAC3P60763 192 aa18.9■□□□□ 0.62
NEDD4L-225ENST00000589054 EMX2Q04743 252 aa18.9■□□□□ 0.62
NEDD4L-225ENST00000589054 HMGN2P46Q86SG4 172 aa18.9■□□□□ 0.62
NEDD4L-225ENST00000589054 TMCO5AQ8N6Q1 288 aa18.9■□□□□ 0.62
NEDD4L-225ENST00000589054 KBTBD8Q8NFY9 601 aa18.9■□□□□ 0.62
NEDD4L-225ENST00000589054 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.9■□□□□ 0.621e-6■■■■■ 58.1
NEDD4L-225ENST00000589054 REXO5Q96IC2 774 aaKnown RBP18.9■□□□□ 0.62
NEDD4L-225ENST00000589054 HDHD5Q9BXW7 423 aa18.9■□□□□ 0.62
NEDD4L-225ENST00000589054 NMUR2Q9GZQ4 415 aa18.9■□□□□ 0.62
NEDD4L-225ENST00000589054 LAT2Q9GZY6 243 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms