RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 STAG3L4Q8TBR4 150 aa7.02□□□□□ -1.29
ATG4D-210ENST00000588972 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.02□□□□□ -1.29
ATG4D-210ENST00000588972 SLC5A11Q8WWX8 675 aa7.02□□□□□ -1.29
ATG4D-210ENST00000588972 ATL1Q8WXF7 558 aa7.02□□□□□ -1.29
ATG4D-210ENST00000588972 OR2A5Q96R48 311 aa7.02□□□□□ -1.29
ATG4D-210ENST00000588972 ABHD6Q9BV23 337 aa7.02□□□□□ -1.29
ATG4D-210ENST00000588972 POLDIP3Q9BY77 421 aaKnown RBP7.02□□□□□ -1.29
ATG4D-210ENST00000588972 ILKAPQ9H0C8 392 aaPredicted RBP7.02□□□□□ -1.29
ATG4D-210ENST00000588972 PCBD2Q9H0N5 130 aa7.02□□□□□ -1.29
ATG4D-210ENST00000588972 NOL11Q9H8H0 719 aaKnown RBP7.02□□□□□ -1.29
ATG4D-210ENST00000588972 MMP25Q9NPA2 562 aa7.02□□□□□ -1.29
ATG4D-210ENST00000588972 TMEM184CQ9NVA4 438 aa7.02□□□□□ -1.29
ATG4D-210ENST00000588972 ASF1BQ9NVP2 202 aa7.02□□□□□ -1.29
ATG4D-210ENST00000588972 COQ3Q9NZJ6 369 aa7.02□□□□□ -1.29
ATG4D-210ENST00000588972 NUDT4Q9NZJ9 180 aa7.02□□□□□ -1.29
ATG4D-210ENST00000588972 FARSAQ9Y285 508 aaKnown RBP7.02□□□□□ -1.29
ATG4D-210ENST00000588972 CCDC88CQ9P219 2028 aa7.01□□□□□ -1.29
ATG4D-210ENST00000588972 PCSK5Q92824 1860 aa7.01□□□□□ -1.29
ATG4D-210ENST00000588972 IQANK1A0A1B0GTG1 560 aa7.01□□□□□ -1.29
ATG4D-210ENST00000588972 A0A1W2PPM1 405 aa7.01□□□□□ -1.29
ATG4D-210ENST00000588972 PLPP2O43688 288 aa7.01□□□□□ -1.29
ATG4D-210ENST00000588972 FMO6PO60774 539 aa7.01□□□□□ -1.29
ATG4D-210ENST00000588972 IGLV2-14P01704 120 aa7.01□□□□□ -1.29
ATG4D-210ENST00000588972 CAPN1P07384 714 aa7.01□□□□□ -1.29
ATG4D-210ENST00000588972 RAB40ALP0C0E4 278 aa7.01□□□□□ -1.29
ATG4D-210ENST00000588972 DDX5P17844 614 aaKnown RBP7.01□□□□□ -1.29
ATG4D-210ENST00000588972 EPORP19235 508 aa7.01□□□□□ -1.29
ATG4D-210ENST00000588972 SLC26A3P40879 764 aa7.01□□□□□ -1.29
ATG4D-210ENST00000588972 CCR8P51685 355 aa7.01□□□□□ -1.29
ATG4D-210ENST00000588972 BMXP51813 675 aa7.01□□□□□ -1.29
ATG4D-210ENST00000588972 CAPZA1P52907 286 aa7.01□□□□□ -1.29
ATG4D-210ENST00000588972 SCN1BQ07699 218 aa7.01□□□□□ -1.29
ATG4D-210ENST00000588972 TCTE1Q5JU00 501 aa7.01□□□□□ -1.29
ATG4D-210ENST00000588972 SULT1C3Q6IMI6 304 aa7.01□□□□□ -1.29
ATG4D-210ENST00000588972 RHBDD2Q6NTF9 364 aa7.01□□□□□ -1.29
ATG4D-210ENST00000588972 KLC3Q6P597 504 aa7.01□□□□□ -1.29
ATG4D-210ENST00000588972 EMBQ6PCB8 327 aa7.01□□□□□ -1.29
ATG4D-210ENST00000588972 CCDC190Q86UF4 302 aa7.01□□□□□ -1.29
ATG4D-210ENST00000588972 ZNF595Q8IYB9 648 aa7.01□□□□□ -1.29
ATG4D-210ENST00000588972 KLHDC8AQ8IYD2 350 aa7.01□□□□□ -1.29
ATG4D-210ENST00000588972 CSNK1A1LQ8N752 337 aa7.01□□□□□ -1.29
ATG4D-210ENST00000588972 SNX31Q8N9S9 440 aa7.01□□□□□ -1.29
ATG4D-210ENST00000588972 TTC29Q8NA56 475 aaPredicted RBP7.01□□□□□ -1.29
ATG4D-210ENST00000588972 ST6GALNAC3Q8NDV1 305 aa7.01□□□□□ -1.29
ATG4D-210ENST00000588972 RHEBL1Q8TAI7 183 aa7.01□□□□□ -1.29
ATG4D-210ENST00000588972 UBTD2Q8WUN7 234 aa7.01□□□□□ -1.29
ATG4D-210ENST00000588972 RERGQ96A58 199 aaPredicted RBP7.01□□□□□ -1.29
ATG4D-210ENST00000588972 MTBPQ96DY7 904 aa7.01□□□□□ -1.29
ATG4D-210ENST00000588972 SPACA9Q96E40 222 aaPredicted RBP7.01□□□□□ -1.29
ATG4D-210ENST00000588972 CABS1Q96KC9 395 aa7.01□□□□□ -1.29
ATG4D-210ENST00000588972 C10orf90Q96M02 699 aa7.01□□□□□ -1.29
ATG4D-210ENST00000588972 LRFN5Q96NI6 719 aa7.01□□□□□ -1.29
ATG4D-210ENST00000588972 ZNF285Q96NJ3 590 aa7.01□□□□□ -1.29
ATG4D-210ENST00000588972 SH3GL2Q99962 352 aa7.01□□□□□ -1.29
ATG4D-210ENST00000588972 CCDC77Q9BR77 488 aa7.01□□□□□ -1.29
ATG4D-210ENST00000588972 HAUS8Q9BT25 410 aa7.01□□□□□ -1.29
ATG4D-210ENST00000588972 NLNQ9BYT8 704 aa7.01□□□□□ -1.29
ATG4D-210ENST00000588972 SEBOXQ9HB31 216 aaPredicted RBP7.01□□□□□ -1.29
ATG4D-210ENST00000588972 CUTCQ9NTM9 273 aa7.01□□□□□ -1.29
ATG4D-210ENST00000588972 TXLNGQ9NUQ3 528 aa7.01□□□□□ -1.29
ATG4D-210ENST00000588972 DNAJC11Q9NVH1 559 aa7.01□□□□□ -1.29
ATG4D-210ENST00000588972 FETUBQ9UGM5 382 aa7.01□□□□□ -1.29
ATG4D-210ENST00000588972 PTBP2Q9UKA9 531 aaKnown RBP7.01□□□□□ -1.29
ATG4D-210ENST00000588972 MRPS2Q9Y399 296 aaKnown RBP7.01□□□□□ -1.29
ATG4D-210ENST00000588972 DNHD1Q96M86 4753 aa7□□□□□ -1.29
ATG4D-210ENST00000588972 SVILO95425 2214 aa7□□□□□ -1.29
ATG4D-210ENST00000588972 UQCRHLA0A096LP55 91 aa7□□□□□ -1.29
ATG4D-210ENST00000588972 A0A0B4J293 547 aa7□□□□□ -1.29
ATG4D-210ENST00000588972 HYKKA2RU49 373 aa7□□□□□ -1.29
ATG4D-210ENST00000588972 SYCE1LA8MT33 242 aa7□□□□□ -1.29
ATG4D-210ENST00000588972 DYNC1I1O14576 645 aa7□□□□□ -1.29
ATG4D-210ENST00000588972 NDUFS4O43181 175 aa7□□□□□ -1.29
ATG4D-210ENST00000588972 OR1F1O43749 312 aa7□□□□□ -1.29
ATG4D-210ENST00000588972 KLHL41O60662 606 aa7□□□□□ -1.29
ATG4D-210ENST00000588972 SRPX2O60687 465 aaPredicted RBP7□□□□□ -1.29
ATG4D-210ENST00000588972 CNOT3O75175 753 aaKnown RBP7□□□□□ -1.29
ATG4D-210ENST00000588972 STK16O75716 305 aa7□□□□□ -1.29
ATG4D-210ENST00000588972 SIX3O95343 332 aaPredicted RBP7□□□□□ -1.29
ATG4D-210ENST00000588972 SERPIND1P05546 499 aa7□□□□□ -1.29
ATG4D-210ENST00000588972 KLK3P07288 261 aaPredicted RBP7□□□□□ -1.29
ATG4D-210ENST00000588972 UQCRHP07919 91 aa7□□□□□ -1.29
ATG4D-210ENST00000588972 HBQ1P09105 142 aa7□□□□□ -1.29
ATG4D-210ENST00000588972 NUDT17P0C025 328 aa7□□□□□ -1.29
ATG4D-210ENST00000588972 LINGO3P0C6S8 592 aa7□□□□□ -1.29
ATG4D-210ENST00000588972 GFAPP14136 432 aa7□□□□□ -1.29
ATG4D-210ENST00000588972 HRH2P25021 359 aa7□□□□□ -1.29
ATG4D-210ENST00000588972 OR1D4P47884 311 aa7□□□□□ -1.29
ATG4D-210ENST00000588972 RPS15AP62244 130 aaKnown RBP7□□□□□ -1.29
ATG4D-210ENST00000588972 REEP5Q00765 189 aa7□□□□□ -1.29
ATG4D-210ENST00000588972 ID2Q02363 134 aa7□□□□□ -1.29
ATG4D-210ENST00000588972 ZNF91Q05481 1191 aa7□□□□□ -1.29
ATG4D-210ENST00000588972 FOXF2Q12947 444 aa7□□□□□ -1.29
ATG4D-210ENST00000588972 RAPSNQ13702 412 aa7□□□□□ -1.29
ATG4D-210ENST00000588972 PDK4Q16654 411 aa7□□□□□ -1.29
ATG4D-210ENST00000588972 PRTGQ2VWP7 1150 aa7□□□□□ -1.29
ATG4D-210ENST00000588972 CEP78Q5JTW2 689 aa7□□□□□ -1.29
ATG4D-210ENST00000588972 LGSNQ5TDP6 509 aa7□□□□□ -1.29
ATG4D-210ENST00000588972 FAM219BQ5XKK7 198 aa7□□□□□ -1.29
ATG4D-210ENST00000588972 ADNP2Q6IQ32 1131 aa7□□□□□ -1.29
ATG4D-210ENST00000588972 IGFL3Q6UXB1 125 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms