RNA–Protein interactions for RNA: ENST00000585333.1

TRIM47-202, Transcript of tripartite motif containing 47, humanhuman

TSL 3

Gene TRIM47, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-202ENST00000585333 GALNT9Q9HCQ5 603 aa11.79□□□□□ -0.52
TRIM47-202ENST00000585333 C8orf4Q9NR00 106 aa11.79□□□□□ -0.52
TRIM47-202ENST00000585333 FLRT3Q9NZU0 649 aa11.79□□□□□ -0.52
TRIM47-202ENST00000585333 NDUFAF4Q9P032 175 aa11.79□□□□□ -0.52
TRIM47-202ENST00000585333 TMCC3Q9ULS5 477 aa11.79□□□□□ -0.52
TRIM47-202ENST00000585333 B3GNT3Q9Y2A9 372 aa11.79□□□□□ -0.52
TRIM47-202ENST00000585333 C15orf41Q9Y2V0 281 aa11.79□□□□□ -0.52
TRIM47-202ENST00000585333 CFAP47Q6ZTR5 3102 aa11.79□□□□□ -0.52
TRIM47-202ENST00000585333 DMXL2Q8TDJ6 3036 aa11.78□□□□□ -0.52
TRIM47-202ENST00000585333 A0A1W2PRQ8 180 aa11.78□□□□□ -0.52
TRIM47-202ENST00000585333 CLDN24A6NM45 220 aa11.78□□□□□ -0.52
TRIM47-202ENST00000585333 GJE1A6NN92 205 aa11.78□□□□□ -0.52
TRIM47-202ENST00000585333 ERVH48-1M5A8F1 160 aa11.78□□□□□ -0.52
TRIM47-202ENST00000585333 CLOCKO15516 846 aa11.78□□□□□ -0.52
TRIM47-202ENST00000585333 CHP2O43745 196 aa11.78□□□□□ -0.52
TRIM47-202ENST00000585333 E2F6O75461 281 aa11.78□□□□□ -0.52
TRIM47-202ENST00000585333 RASAL1O95294 804 aa11.78□□□□□ -0.52
TRIM47-202ENST00000585333 CRYABP02511 175 aaKnown RBP11.78□□□□□ -0.52
TRIM47-202ENST00000585333 H1F0P07305 194 aaKnown RBP11.78□□□□□ -0.52
TRIM47-202ENST00000585333 ELK4P28324 431 aa11.78□□□□□ -0.52
TRIM47-202ENST00000585333 RRM2P31350 389 aa11.78□□□□□ -0.52
TRIM47-202ENST00000585333 RYKP34925 604 aa11.78□□□□□ -0.52
TRIM47-202ENST00000585333 RBM34P42696 430 aaKnown RBP11.78□□□□□ -0.52
TRIM47-202ENST00000585333 ACAA2P42765 397 aaKnown RBP11.78□□□□□ -0.52
TRIM47-202ENST00000585333 OR1E2P47887 323 aa11.78□□□□□ -0.52
TRIM47-202ENST00000585333 POLR2HP52434 150 aaKnown RBP11.78□□□□□ -0.52
TRIM47-202ENST00000585333 ZNF136P52737 540 aa11.78□□□□□ -0.52
TRIM47-202ENST00000585333 DLX5P56178 289 aa11.78□□□□□ -0.52
TRIM47-202ENST00000585333 VLDLRP98155 873 aa11.78□□□□□ -0.52
TRIM47-202ENST00000585333 DGCR6Q14129 220 aa11.78□□□□□ -0.52
TRIM47-202ENST00000585333 TAF11Q15544 211 aa11.78□□□□□ -0.52
TRIM47-202ENST00000585333 OR1Q1Q15612 314 aa11.78□□□□□ -0.52
TRIM47-202ENST00000585333 ATP6AP1Q15904 470 aa11.78□□□□□ -0.52
TRIM47-202ENST00000585333 GLIPR1L2Q4G1C9 344 aa11.78□□□□□ -0.52
TRIM47-202ENST00000585333 ENTPD8Q5MY95 495 aa11.78□□□□□ -0.52
TRIM47-202ENST00000585333 GALNTL5Q7Z4T8 443 aa11.78□□□□□ -0.52
TRIM47-202ENST00000585333 ZNF227Q86WZ6 799 aa11.78□□□□□ -0.52
TRIM47-202ENST00000585333 SULF2Q8IWU5 870 aa11.78□□□□□ -0.52
TRIM47-202ENST00000585333 SVOPLQ8N434 492 aa11.78□□□□□ -0.52
TRIM47-202ENST00000585333 OR2M3Q8NG83 312 aa11.78□□□□□ -0.52
TRIM47-202ENST00000585333 ADAMTS16Q8TE57 1224 aa11.78□□□□□ -0.52
TRIM47-202ENST00000585333 SLC25A43Q8WUT9 341 aaPredicted RBP11.78□□□□□ -0.52
TRIM47-202ENST00000585333 PYDC1Q8WXC3 89 aa11.78□□□□□ -0.52
TRIM47-202ENST00000585333 SLC38A4Q969I6 547 aa11.78□□□□□ -0.52
TRIM47-202ENST00000585333 C1GALT1C1Q96EU7 318 aa11.78□□□□□ -0.52
TRIM47-202ENST00000585333 NRBF2Q96F24 287 aa11.78□□□□□ -0.52
TRIM47-202ENST00000585333 CENPNQ96H22 339 aaPredicted RBP11.78□□□□□ -0.52
TRIM47-202ENST00000585333 EPYCQ99645 322 aa11.78□□□□□ -0.52
TRIM47-202ENST00000585333 PIGQQ9BRB3 760 aa11.78□□□□□ -0.52
TRIM47-202ENST00000585333 SLC19A3Q9BZV2 496 aa11.78□□□□□ -0.52
TRIM47-202ENST00000585333 AMBRA1Q9C0C7 1298 aa11.78□□□□□ -0.52
TRIM47-202ENST00000585333 VCX3BQ9H321 246 aa11.78□□□□□ -0.52
TRIM47-202ENST00000585333 DSN1Q9H410 356 aa11.78□□□□□ -0.52
TRIM47-202ENST00000585333 ACER3Q9NUN7 267 aa11.78□□□□□ -0.52
TRIM47-202ENST00000585333 ACAD8Q9UKU7 415 aa11.78□□□□□ -0.52
TRIM47-202ENST00000585333 ZFHX4Q86UP3 3567 aa11.78□□□□□ -0.52
TRIM47-202ENST00000585333 CHD6Q8TD26 2715 aa11.78□□□□□ -0.52
TRIM47-202ENST00000585333 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.77□□□□□ -0.53
TRIM47-202ENST00000585333 TMEM229AB2RXF0 380 aa11.77□□□□□ -0.53
TRIM47-202ENST00000585333 hCG_2039718K7EN88 272 aa11.77□□□□□ -0.53
TRIM47-202ENST00000585333 ETV2O00321 342 aaPredicted RBP11.77□□□□□ -0.53
TRIM47-202ENST00000585333 GNB5O14775 395 aa11.77□□□□□ -0.53
TRIM47-202ENST00000585333 MGRN1O60291 552 aa11.77□□□□□ -0.53
TRIM47-202ENST00000585333 GADD45GO95257 159 aa11.77□□□□□ -0.53
TRIM47-202ENST00000585333 GKN3PP0CG01 181 aa11.77□□□□□ -0.53
TRIM47-202ENST00000585333 DPP4P27487 766 aa11.77□□□□□ -0.53
TRIM47-202ENST00000585333 GDF1P27539 372 aa11.77□□□□□ -0.53
TRIM47-202ENST00000585333 IDH2P48735 452 aaKnown RBP11.77□□□□□ -0.53
TRIM47-202ENST00000585333 DNASE1L1P49184 302 aa11.77□□□□□ -0.53
TRIM47-202ENST00000585333 CLK1P49759 484 aaKnown RBP11.77□□□□□ -0.53
TRIM47-202ENST00000585333 MEOX1P50221 254 aa11.77□□□□□ -0.53
TRIM47-202ENST00000585333 SPIBQ01892 262 aa11.77□□□□□ -0.53
TRIM47-202ENST00000585333 QPRTQ15274 297 aa11.77□□□□□ -0.53
TRIM47-202ENST00000585333 RCN1Q15293 331 aa11.77□□□□□ -0.53
TRIM47-202ENST00000585333 SLC25A53Q5H9E4 307 aa11.77□□□□□ -0.53
TRIM47-202ENST00000585333 ALG10BQ5I7T1 473 aa11.77□□□□□ -0.53
TRIM47-202ENST00000585333 DESI1Q6ICB0 168 aa11.77□□□□□ -0.53
TRIM47-202ENST00000585333 CBLN3Q6UW01 205 aa11.77□□□□□ -0.53
TRIM47-202ENST00000585333 HMGN2P46Q86SG4 172 aa11.77□□□□□ -0.53
TRIM47-202ENST00000585333 RNF113BQ8IZP6 322 aaKnown RBP11.77□□□□□ -0.53
TRIM47-202ENST00000585333 PQLC1Q8N2U9 271 aa11.77□□□□□ -0.53
TRIM47-202ENST00000585333 CADM2Q8N3J6 435 aa11.77□□□□□ -0.53
TRIM47-202ENST00000585333 FAM109AQ8N4B1 249 aa11.77□□□□□ -0.53
TRIM47-202ENST00000585333 FAM86B1Q8N7N1 296 aa11.77□□□□□ -0.53
TRIM47-202ENST00000585333 WDSUB1Q8N9V3 476 aa11.77□□□□□ -0.53
TRIM47-202ENST00000585333 CATSPER1Q8NEC5 780 aa11.77□□□□□ -0.53
TRIM47-202ENST00000585333 GPR119Q8TDV5 335 aa11.77□□□□□ -0.53
TRIM47-202ENST00000585333 DNAJC9Q8WXX5 260 aa11.77□□□□□ -0.53
TRIM47-202ENST00000585333 PNPLA2Q96AD5 504 aa11.77□□□□□ -0.53
TRIM47-202ENST00000585333 SLC41A3Q96GZ6 507 aa11.77□□□□□ -0.53
TRIM47-202ENST00000585333 KLHL4Q9C0H6 718 aa11.77□□□□□ -0.53
TRIM47-202ENST00000585333 VCXQ9H320 206 aa11.77□□□□□ -0.53
TRIM47-202ENST00000585333 KLHL1Q9NR64 748 aa11.77□□□□□ -0.53
TRIM47-202ENST00000585333 AGPAT4Q9NRZ5 378 aa11.77□□□□□ -0.53
TRIM47-202ENST00000585333 STX18Q9P2W9 335 aaKnown RBP11.77□□□□□ -0.53
TRIM47-202ENST00000585333 RIMS3Q9UJD0 308 aa11.77□□□□□ -0.53
TRIM47-202ENST00000585333 CHST2Q9Y4C5 530 aa11.77□□□□□ -0.53
TRIM47-202ENST00000585333 MED13Q9UHV7 2174 aa11.77□□□□□ -0.53
TRIM47-202ENST00000585333 LAMA5O15230 3695 aa11.76□□□□□ -0.53
TRIM47-202ENST00000585333 A0A0B4J2E0 115 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms