RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-231	ENST00000584063	RNASET2	O00584	256 aa	Known RBP	10.81	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	GMDS	O60547	372 aa		10.81	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	VAMP5	O95183	116 aa		10.81	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	GSTP1	P09211	210 aa	Known RBP	10.81	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	PSMA1	P25786	263 aa	Known RBP	10.81	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	APEX1	P27695	318 aa	Known RBP	10.81	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	CRYBB2	P43320	205 aa		10.81	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	MECP2	P51608	486 aa	Known RBP	10.81	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	DCDC1	P59894	354 aa		10.81	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	ACER2	Q5QJU3	275 aa		10.81	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	KIAA1161	Q6NSJ0	714 aa		10.81	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	CASP12	Q6UXS9	341 aa		10.81	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	LRRC56	Q8IYG6	542 aa	Predicted RBP	10.81	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	CADM2	Q8N3J6	435 aa		10.81	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	YIPF5	Q969M3	257 aa		10.81	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	DCLRE1C	Q96SD1	692 aa	Known RBP	10.81	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	GPA33	Q99795	319 aa		10.81	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	ZDHHC5	Q9C0B5	715 aa		10.81	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	EGLN3	Q9H6Z9	239 aa		10.81	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	GSN-AS1	Q9NRJ2	163 aa		10.81	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	CCDC59	Q9P031	241 aa	Known RBP	10.81	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	MKLN1	Q9UL63	735 aa		10.81	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	DYRK1B	Q9Y463	629 aa		10.81	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	ZAR1L	A6NP61	321 aa		10.8	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	ANHX	E9PGG2	379 aa		10.8	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	HYAL3	O43820	417 aa	Predicted RBP	10.8	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	UGDH	O60701	494 aa		10.8	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	LGI1	O95970	557 aa		10.8	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	TSPAN19	P0C672	248 aa		10.8	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	HOXA1	P49639	335 aa	Predicted RBP	10.8	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	SPIN4	Q56A73	249 aa		10.8	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	FAM71E1	Q6IPT2	247 aa		10.8	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	ACSM5	Q6NUN0	579 aa		10.8	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	TCTN3	Q6NUS6	607 aa		10.8	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	ZNF367	Q7RTV3	350 aa		10.8	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	FAM46D	Q8NEK8	389 aa		10.8	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	SLC7A13	Q8TCU3	470 aa		10.8	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	ELSPBP1	Q96BH3	223 aa		10.8	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	COQ10A	Q96MF6	247 aa		10.8	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	PAPOLG	Q9BWT3	736 aa	Known RBP	10.8	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	SLC22A4	Q9H015	551 aa		10.8	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	BRF2	Q9HAW0	419 aa		10.8	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	LRRK1	Q38SD2	2015 aa		10.8	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063		A0A0B4J293	547 aa		10.8	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	FABP12	A6NFH5	140 aa		10.8	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	MYL12B	O14950	172 aa		10.8	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	KLK3	P07288	261 aa	Predicted RBP	10.8	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	C8orf89	P0DMQ9	161 aa		10.8	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	OR12D1	P0DN82	309 aa		10.8	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	DRD3	P35462	400 aa		10.8	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	OR3A3	P47888	321 aa		10.8	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	RPS25	P62851	125 aa	Known RBP	10.8	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	ETFDH	Q16134	617 aa		10.8	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	BEX5	Q5H9J7	111 aa		10.8	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	DCST1	Q5T197	706 aa		10.8	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	FAM46C	Q5VWP2	391 aa		10.8	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	ZNF544	Q6NX49	715 aa		10.8	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	LINC00299	Q6ZSB3	139 aa		10.8	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	ADCK2	Q7Z695	626 aa		10.8	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	S100A7A	Q86SG5	101 aa		10.8	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	ATP6V1C2	Q8NEY4	427 aa		10.8	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	RNF31	Q96EP0	1072 aa		10.8	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	LRR1	Q96L50	414 aa		10.8	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	UCK2	Q9BZX2	261 aa		10.8	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	TBC1D17	Q9HA65	648 aa		10.8	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	KLK4	Q9Y5K2	254 aa		10.8	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	ARID1B	Q8NFD5	2236 aa	Predicted RBP	10.79	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	CXorf51A	A0A1B0GTR3	108 aa		10.79	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063		E9PQ18	207 aa		10.79	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063		K7EQS6	105 aa		10.79	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	PLPP1	O14494	284 aa		10.79	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	SLC28A2	O43868	658 aa		10.79	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	EIF1B	O60739	113 aa	Known RBP	10.79	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	NSA2	O95478	260 aa	Known RBP	10.79	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	EGF	P01133	1207 aa		10.79	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	PTAFR	P25105	342 aa		10.79	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	EIF2S3	P41091	472 aa	Known RBP	10.79	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	EIF1	P41567	113 aa	Known RBP	10.79	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	RORC	P51449	518 aa		10.79	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	PNLIPRP1	P54315	467 aa		10.79	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	GPR50	Q13585	617 aa		10.79	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	P2RY14	Q15391	338 aa		10.79	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	RD3	Q7Z3Z2	195 aa		10.79	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	IQCH	Q86VS3	1027 aa		10.79	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	LAS2	Q8IYD9	372 aa		10.79	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	GHDC	Q8N2G8	530 aa		10.79	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	OR5H6	Q8NGV6	325 aa		10.79	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	C1orf216	Q8TAB5	229 aa		10.79	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	PRAP1	Q96NZ9	151 aa		10.79	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	HDHD5	Q9BXW7	423 aa		10.79	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	NLN	Q9BYT8	704 aa		10.79	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	PLA2G12A	Q9BZM1	189 aa		10.79	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	MBNL1	Q9NR56	388 aa	Known RBP	10.79	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	TEX10	Q9NXF1	929 aa	Predicted RBP	10.79	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	ANGPT4	Q9Y264	503 aa		10.79	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	ATP23	Q9Y6H3	246 aa		10.79	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	C2orf92	A0A1B0GVN3	265 aa		10.79	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	MARCH11	A6NNE9	402 aa		10.79	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	WRB	O00258	174 aa		10.79	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	MED6	O75586	246 aa		10.79	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms