RNA–Protein interactions for RNA: ENST00000582821.5

GGA3-215, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 1,018 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-215ENST00000582821 PDSS1Q5T2R2 415 aa12.55□□□□□ -0.4
GGA3-215ENST00000582821 LRIF1Q5T3J3 769 aa12.55□□□□□ -0.4
GGA3-215ENST00000582821 METTL21CQ5VZV1 264 aa12.55□□□□□ -0.4
GGA3-215ENST00000582821 PLXDC2Q6UX71 529 aa12.55□□□□□ -0.4
GGA3-215ENST00000582821 P4HA3Q7Z4N8 544 aa12.55□□□□□ -0.4
GGA3-215ENST00000582821 CMIPQ8IY22 773 aa12.55□□□□□ -0.4
GGA3-215ENST00000582821 FBXO27Q8NI29 283 aa12.55□□□□□ -0.4
GGA3-215ENST00000582821 ST8SIA1Q92185 356 aa12.55□□□□□ -0.4
GGA3-215ENST00000582821 ZNF524Q96C55 264 aa12.55□□□□□ -0.4
GGA3-215ENST00000582821 SPDL1Q96EA4 605 aa12.55□□□□□ -0.4
GGA3-215ENST00000582821 ZNF845Q96IR2 970 aaPredicted RBP12.55□□□□□ -0.4
GGA3-215ENST00000582821 THUMPD3Q9BV44 507 aaKnown RBP12.55□□□□□ -0.4
GGA3-215ENST00000582821 RAD21L1Q9H4I0 556 aa12.55□□□□□ -0.4
GGA3-215ENST00000582821 EXOSC3Q9NQT5 275 aaKnown RBP12.55□□□□□ -0.4
GGA3-215ENST00000582821 CALML5Q9NZT1 146 aa12.55□□□□□ -0.4
GGA3-215ENST00000582821 CCDC167Q9P0B6 97 aa12.55□□□□□ -0.4
GGA3-215ENST00000582821 PRDM4Q9UKN5 801 aa12.55□□□□□ -0.4
GGA3-215ENST00000582821 POLQO75417 2590 aa12.54□□□□□ -0.4
GGA3-215ENST00000582821 A0A1W2PNV4 684 aa12.54□□□□□ -0.4
GGA3-215ENST00000582821 GJE1A6NN92 205 aa12.54□□□□□ -0.4
GGA3-215ENST00000582821 CLIC1O00299 241 aa12.54□□□□□ -0.4
GGA3-215ENST00000582821 EIF1AYO14602 144 aaKnown RBP12.54□□□□□ -0.4
GGA3-215ENST00000582821 ATP8B1O43520 1251 aa12.54□□□□□ -0.4
GGA3-215ENST00000582821 CHRM4P08173 479 aa12.54□□□□□ -0.4
GGA3-215ENST00000582821 TFPTP0C1Z6 253 aa12.54□□□□□ -0.4
GGA3-215ENST00000582821 NR2F1P10589 423 aa12.54□□□□□ -0.4
GGA3-215ENST00000582821 FCGR2AP12318 317 aa12.54□□□□□ -0.4
GGA3-215ENST00000582821 BMP2P12643 396 aa12.54□□□□□ -0.4
GGA3-215ENST00000582821 PGCP20142 388 aa12.54□□□□□ -0.4
GGA3-215ENST00000582821 IL11P20809 199 aa12.54□□□□□ -0.4
GGA3-215ENST00000582821 AGFG1P52594 562 aaKnown RBP12.54□□□□□ -0.4
GGA3-215ENST00000582821 FADDQ13158 208 aa12.54□□□□□ -0.4
GGA3-215ENST00000582821 QPRTQ15274 297 aa12.54□□□□□ -0.4
GGA3-215ENST00000582821 GUSBP1Q15486 140 aa12.54□□□□□ -0.4
GGA3-215ENST00000582821 RGNQ15493 299 aa12.54□□□□□ -0.4
GGA3-215ENST00000582821 SGCBQ16585 318 aa12.54□□□□□ -0.4
GGA3-215ENST00000582821 GTDC1Q4AE62 458 aa12.54□□□□□ -0.4
GGA3-215ENST00000582821 AGKQ53H12 422 aa12.54□□□□□ -0.4
GGA3-215ENST00000582821 SLC2A7Q6PXP3 512 aa12.54□□□□□ -0.4
GGA3-215ENST00000582821 DNAJC14Q6Y2X3 702 aaPredicted RBP12.54□□□□□ -0.4
GGA3-215ENST00000582821 LILRA2Q8N149 483 aa12.54□□□□□ -0.4
GGA3-215ENST00000582821 OR10D3Q8NH80 312 aa12.54□□□□□ -0.4
GGA3-215ENST00000582821 OR2V1Q8NHB1 315 aa12.54□□□□□ -0.4
GGA3-215ENST00000582821 RFWD2Q8NHY2 731 aa12.54□□□□□ -0.4
GGA3-215ENST00000582821 FNDC9Q8TBE3 224 aa12.54□□□□□ -0.4
GGA3-215ENST00000582821 PNPT1Q8TCS8 783 aaKnown RBP12.54□□□□□ -0.4
GGA3-215ENST00000582821 TMEM234Q8WY98 164 aa12.54□□□□□ -0.4
GGA3-215ENST00000582821 SMPDL3BQ92485 455 aa12.54□□□□□ -0.4
GGA3-215ENST00000582821 KLHL15Q96M94 604 aa12.54□□□□□ -0.4
GGA3-215ENST00000582821 ZNF385DQ9H6B1 395 aa12.54□□□□□ -0.4
GGA3-215ENST00000582821 MED4Q9NPJ6 270 aa12.54□□□□□ -0.4
GGA3-215ENST00000582821 P2RX2Q9UBL9 471 aa12.54□□□□□ -0.4
GGA3-215ENST00000582821 TRIM33Q9UPN9 1127 aa12.54□□□□□ -0.4
GGA3-215ENST00000582821 PDZD2O15018 2839 aa12.54□□□□□ -0.4
GGA3-215ENST00000582821 A0A1W2PP18 115 aa12.53□□□□□ -0.4
GGA3-215ENST00000582821 A8MXE2 369 aa12.53□□□□□ -0.4
GGA3-215ENST00000582821 MSTNO14793 375 aa12.53□□□□□ -0.4
GGA3-215ENST00000582821 DBIP07108 87 aaKnown RBP12.53□□□□□ -0.4
GGA3-215ENST00000582821 UBTFL6P0CB48 400 aaPredicted RBP12.53□□□□□ -0.4
GGA3-215ENST00000582821 ETFAP13804 333 aa12.53□□□□□ -0.4
GGA3-215ENST00000582821 NID1P14543 1247 aa12.53□□□□□ -0.4
GGA3-215ENST00000582821 CAPN3P20807 821 aa12.53□□□□□ -0.4
GGA3-215ENST00000582821 UQCRC1P31930 480 aa12.53□□□□□ -0.4
GGA3-215ENST00000582821 CRATP43155 626 aa12.53□□□□□ -0.4
GGA3-215ENST00000582821 KIR2DL2P43627 348 aaPredicted RBP12.53□□□□□ -0.4
GGA3-215ENST00000582821 EIF1AXP47813 144 aaKnown RBP12.53□□□□□ -0.4
GGA3-215ENST00000582821 SLC6A8P48029 635 aa12.53□□□□□ -0.4
GGA3-215ENST00000582821 SESN3P58005 492 aa12.53□□□□□ -0.4
GGA3-215ENST00000582821 DSTNP60981 165 aa12.53□□□□□ -0.4
GGA3-215ENST00000582821 HSP90B2PQ58FF3 399 aa12.53□□□□□ -0.4
GGA3-215ENST00000582821 KIF18BQ86Y91 864 aa12.53□□□□□ -0.4
GGA3-215ENST00000582821 GCNT2Q8N0V5 402 aa12.53□□□□□ -0.4
GGA3-215ENST00000582821 TMCO5AQ8N6Q1 288 aa12.53□□□□□ -0.4
GGA3-215ENST00000582821 TSPEARQ8WU66 669 aa12.53□□□□□ -0.4
GGA3-215ENST00000582821 SLC38A5Q8WUX1 472 aa12.53□□□□□ -0.4
GGA3-215ENST00000582821 OSTF1Q92882 214 aa12.53□□□□□ -0.4
GGA3-215ENST00000582821 STARD4Q96DR4 205 aa12.53□□□□□ -0.4
GGA3-215ENST00000582821 AURKBQ96GD4 344 aaPredicted RBP12.53□□□□□ -0.4
GGA3-215ENST00000582821 MCCC2Q9HCC0 563 aa12.53□□□□□ -0.4
GGA3-215ENST00000582821 NPHS2Q9NP85 383 aa12.53□□□□□ -0.4
GGA3-215ENST00000582821 ACER3Q9NUN7 267 aa12.53□□□□□ -0.4
GGA3-215ENST00000582821 SLC25A37Q9NYZ2 338 aa12.53□□□□□ -0.4
GGA3-215ENST00000582821 SLAMF8Q9P0V8 285 aa12.53□□□□□ -0.4
GGA3-215ENST00000582821 DCTN4Q9UJW0 460 aa12.53□□□□□ -0.4
GGA3-215ENST00000582821 PACSIN3Q9UKS6 424 aa12.53□□□□□ -0.4
GGA3-215ENST00000582821 MCTS1Q9ULC4 181 aaKnown RBP12.53□□□□□ -0.4
GGA3-215ENST00000582821 DSPPQ9NZW4 1301 aa12.53□□□□□ -0.4
GGA3-215ENST00000582821 AKAP6Q13023 2319 aa12.53□□□□□ -0.4
GGA3-215ENST00000582821 FREM1Q5H8C1 2179 aa12.52□□□□□ -0.4
GGA3-215ENST00000582821 TRBV5-3A0A0A0MS03 114 aa12.52□□□□□ -0.41
GGA3-215ENST00000582821 A0A0G2JPF8 293 aa12.52□□□□□ -0.41
GGA3-215ENST00000582821 HNRNPCL2B2RXH8 293 aa12.52□□□□□ -0.41
GGA3-215ENST00000582821 HNRNPCL3B7ZW38 293 aa12.52□□□□□ -0.41
GGA3-215ENST00000582821 NR5A2O00482 541 aa12.52□□□□□ -0.41
GGA3-215ENST00000582821 FAAHO00519 579 aa12.52□□□□□ -0.41
GGA3-215ENST00000582821 TNFSF11O14788 317 aa12.52□□□□□ -0.41
GGA3-215ENST00000582821 CXCL13O43927 109 aa12.52□□□□□ -0.41
GGA3-215ENST00000582821 HNRNPCL1O60812 293 aaKnown RBP12.52□□□□□ -0.41
GGA3-215ENST00000582821 BCAS1O75363 584 aaPredicted RBP12.52□□□□□ -0.41
GGA3-215ENST00000582821 CYP7B1O75881 506 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms