RNA–Protein interactions for RNA: ENST00000582230.5

TOP3A-213, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-213ENST00000582230 FAM57AQ8TBR7 257 aa18.15■□□□□ 0.5
TOP3A-213ENST00000582230 MRGPRX4Q96LA9 322 aa18.15■□□□□ 0.5
TOP3A-213ENST00000582230 TIMP4Q99727 224 aa18.15■□□□□ 0.5
TOP3A-213ENST00000582230 KLHDC3Q9BQ90 382 aa18.15■□□□□ 0.5
TOP3A-213ENST00000582230 UGT2B28Q9BY64 529 aa18.15■□□□□ 0.5
TOP3A-213ENST00000582230 TAS2R1Q9NYW7 299 aa18.15■□□□□ 0.5
TOP3A-213ENST00000582230 STOML1Q9UBI4 398 aa18.15■□□□□ 0.5
TOP3A-213ENST00000582230 CFAP46Q8IYW2 2715 aa18.14■□□□□ 0.49
TOP3A-213ENST00000582230 TNFSF12-TNFSF13A0A0A6YY99 330 aa18.14■□□□□ 0.49
TOP3A-213ENST00000582230 OR2M5A3KFT3 312 aa18.14■□□□□ 0.49
TOP3A-213ENST00000582230 J3QKU1 62 aa18.14■□□□□ 0.49
TOP3A-213ENST00000582230 CXCR6O00574 342 aa18.14■□□□□ 0.49
TOP3A-213ENST00000582230 TPST1O60507 370 aa18.14■□□□□ 0.49
TOP3A-213ENST00000582230 GMNNO75496 209 aa18.14■□□□□ 0.49
TOP3A-213ENST00000582230 OPN1SWP03999 348 aa18.14■□□□□ 0.49
TOP3A-213ENST00000582230 KCNJ5P48544 419 aa18.14■□□□□ 0.49
TOP3A-213ENST00000582230 BNIP1Q12981 228 aa18.14■□□□□ 0.49
TOP3A-213ENST00000582230 TOMM34Q15785 309 aaPredicted RBP18.14■□□□□ 0.49
TOP3A-213ENST00000582230 BCL2A1Q16548 175 aa18.14■□□□□ 0.49
TOP3A-213ENST00000582230 C6orf89Q6UWU4 347 aa18.14■□□□□ 0.49
TOP3A-213ENST00000582230 PM20D2Q8IYS1 436 aa18.14■□□□□ 0.49
TOP3A-213ENST00000582230 SMYD1Q8NB12 490 aa18.14■□□□□ 0.49
TOP3A-213ENST00000582230 FIG4Q92562 907 aa18.14■□□□□ 0.49
TOP3A-213ENST00000582230 TAMM41Q96BW9 452 aa18.14■□□□□ 0.49
TOP3A-213ENST00000582230 RSPO3Q9BXY4 272 aaPredicted RBP18.14■□□□□ 0.49
TOP3A-213ENST00000582230 ACER3Q9NUN7 267 aa18.14■□□□□ 0.49
TOP3A-213ENST00000582230 GMPR2Q9P2T1 348 aaKnown RBP18.14■□□□□ 0.49
TOP3A-213ENST00000582230 CD300AQ9UGN4 299 aa18.14■□□□□ 0.49
TOP3A-213ENST00000582230 OSGIN2Q9Y236 505 aa18.14■□□□□ 0.49
TOP3A-213ENST00000582230 AP4B1Q9Y6B7 739 aa18.14■□□□□ 0.49
TOP3A-213ENST00000582230 ADAM11O75078 769 aa18.13■□□□□ 0.49
TOP3A-213ENST00000582230 ATP5HO75947 161 aa18.13■□□□□ 0.49
TOP3A-213ENST00000582230 NTN1O95631 604 aa18.13■□□□□ 0.49
TOP3A-213ENST00000582230 TPOP07202 933 aa18.13■□□□□ 0.49
TOP3A-213ENST00000582230 STSP08842 583 aa18.13■□□□□ 0.49
TOP3A-213ENST00000582230 GKN3PP0CG01 181 aa18.13■□□□□ 0.49
TOP3A-213ENST00000582230 GP1BBP13224 206 aa18.13■□□□□ 0.49
TOP3A-213ENST00000582230 CPN1P15169 458 aa18.13■□□□□ 0.49
TOP3A-213ENST00000582230 PSMA4P25789 261 aaKnown RBP18.13■□□□□ 0.49
TOP3A-213ENST00000582230 ELK4P28324 431 aa18.13■□□□□ 0.49
TOP3A-213ENST00000582230 ACAA2P42765 397 aaKnown RBP18.13■□□□□ 0.49
TOP3A-213ENST00000582230 IDH2P48735 452 aaKnown RBP18.13■□□□□ 0.49
TOP3A-213ENST00000582230 DLX5P56178 289 aa18.13■□□□□ 0.49
TOP3A-213ENST00000582230 SESN3P58005 492 aa18.13■□□□□ 0.49
TOP3A-213ENST00000582230 COPZ1P61923 177 aa18.13■□□□□ 0.49
TOP3A-213ENST00000582230 DUSP7Q16829 419 aa18.13■□□□□ 0.49
TOP3A-213ENST00000582230 GXYLT1Q4G148 440 aa18.13■□□□□ 0.49
TOP3A-213ENST00000582230 RNF148Q8N7C7 305 aa18.13■□□□□ 0.49
TOP3A-213ENST00000582230 RNF145Q96MT1 663 aa18.13■□□□□ 0.49
TOP3A-213ENST00000582230 BAG5Q9UL15 447 aa18.13■□□□□ 0.49
TOP3A-213ENST00000582230 PRPF19Q9UMS4 504 aaKnown RBP18.13■□□□□ 0.49
TOP3A-213ENST00000582230 ZNF337Q9Y3M9 751 aa18.13■□□□□ 0.49
TOP3A-213ENST00000582230 SMG1Q96Q15 3661 aaKnown RBP18.12■□□□□ 0.49
TOP3A-213ENST00000582230 AP3D1O14617 1153 aa18.12■□□□□ 0.49
TOP3A-213ENST00000582230 ZNHIT1O43257 154 aa18.12■□□□□ 0.49
TOP3A-213ENST00000582230 EPPINO95925 133 aa18.12■□□□□ 0.49
TOP3A-213ENST00000582230 LGI1O95970 557 aa18.12■□□□□ 0.49
TOP3A-213ENST00000582230 PEPDP12955 493 aa18.12■□□□□ 0.49
TOP3A-213ENST00000582230 GGT1P19440 569 aa18.12■□□□□ 0.49
TOP3A-213ENST00000582230 CD247P20963 164 aa18.12■□□□□ 0.49
TOP3A-213ENST00000582230 HTR3AP46098 478 aa18.12■□□□□ 0.49
TOP3A-213ENST00000582230 UQCRFS1P47985 274 aa18.12■□□□□ 0.49
TOP3A-213ENST00000582230 RASSF2P50749 326 aa18.12■□□□□ 0.49
TOP3A-213ENST00000582230 CRYBA2P53672 197 aa18.12■□□□□ 0.49
TOP3A-213ENST00000582230 FOXF1Q12946 379 aa18.12■□□□□ 0.49
TOP3A-213ENST00000582230 FXNQ16595 210 aa18.12■□□□□ 0.49
TOP3A-213ENST00000582230 EIF2S3LQ2VIR3 472 aaKnown RBP18.12■□□□□ 0.49
TOP3A-213ENST00000582230 GLIPR1L2Q4G1C9 344 aa18.12■□□□□ 0.49
TOP3A-213ENST00000582230 LRRC23Q53EV4 343 aaPredicted RBP18.12■□□□□ 0.49
TOP3A-213ENST00000582230 GRINAQ7Z429 371 aa18.12■□□□□ 0.49
TOP3A-213ENST00000582230 OR5M1Q8NGP8 315 aa18.12■□□□□ 0.49
TOP3A-213ENST00000582230 POC1BQ8TC44 478 aa18.12■□□□□ 0.49
TOP3A-213ENST00000582230 PROX1Q92786 737 aa18.12■□□□□ 0.49
TOP3A-213ENST00000582230 PRDM14Q9GZV8 571 aa18.12■□□□□ 0.49
TOP3A-213ENST00000582230 ADPRHL2Q9NX46 363 aa18.12■□□□□ 0.49
TOP3A-213ENST00000582230 TNFRSF10DQ9UBN6 386 aa18.12■□□□□ 0.49
TOP3A-213ENST00000582230 SHANK1Q9Y566 2161 aa18.12■□□□□ 0.49
TOP3A-213ENST00000582230 BAHCC1Q9P281 2608 aa18.12■□□□□ 0.49
TOP3A-213ENST00000582230 FIGNL2A6NMB9 653 aa18.11■□□□□ 0.49
TOP3A-213ENST00000582230 SHISA8B8ZZ34 492 aa18.11■□□□□ 0.49
TOP3A-213ENST00000582230 GYG2O15488 501 aa18.11■□□□□ 0.49
TOP3A-213ENST00000582230 FESP07332 822 aa18.11■□□□□ 0.49
TOP3A-213ENST00000582230 HOXD4P09016 255 aaPredicted RBP18.11■□□□□ 0.49
TOP3A-213ENST00000582230 PRG2P13727 222 aa18.11■□□□□ 0.49
TOP3A-213ENST00000582230 TCN1P20061 433 aaPredicted RBP18.11■□□□□ 0.49
TOP3A-213ENST00000582230 POU3F2P20265 443 aaPredicted RBP18.11■□□□□ 0.49
TOP3A-213ENST00000582230 ME2P23368 584 aa18.11■□□□□ 0.49
TOP3A-213ENST00000582230 APOBEC1P41238 236 aaKnown RBP18.11■□□□□ 0.49
TOP3A-213ENST00000582230 SLC1A3P43003 542 aa18.11■□□□□ 0.49
TOP3A-213ENST00000582230 CA7P43166 264 aa18.11■□□□□ 0.49
TOP3A-213ENST00000582230 LHX2P50458 406 aa18.11■□□□□ 0.49
TOP3A-213ENST00000582230 RAC1P63000 192 aa18.11■□□□□ 0.49
TOP3A-213ENST00000582230 CEACAM7Q14002 265 aa18.11■□□□□ 0.49
TOP3A-213ENST00000582230 SF3B4Q15427 424 aaKnown RBP eCLIP18.11■□□□□ 0.49
TOP3A-213ENST00000582230 DNAL1Q4LDG9 190 aa18.11■□□□□ 0.49
TOP3A-213ENST00000582230 CYBRD1Q53TN4 286 aa18.11■□□□□ 0.49
TOP3A-213ENST00000582230 GLYATQ6IB77 296 aa18.11■□□□□ 0.49
TOP3A-213ENST00000582230 WBP2NLQ6ICG8 309 aa18.11■□□□□ 0.49
TOP3A-213ENST00000582230 CD163Q86VB7 1156 aa18.11■□□□□ 0.49
TOP3A-213ENST00000582230 COMTD1Q86VU5 262 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms