RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 MAGEA5P43359 124 aa1.86□□□□□ -2.11
SMCHD1-206ENST00000581631 CCR6P51684 374 aa1.86□□□□□ -2.11
SMCHD1-206ENST00000581631 LAGE3Q14657 143 aa1.86□□□□□ -2.11
SMCHD1-206ENST00000581631 C16orf72Q14CZ0 275 aa1.86□□□□□ -2.11
SMCHD1-206ENST00000581631 TIGITQ495A1 244 aa1.86□□□□□ -2.11
SMCHD1-206ENST00000581631 FAM199XQ6PEV8 388 aaPredicted RBP1.86□□□□□ -2.11
SMCHD1-206ENST00000581631 ARSKQ6UWY0 536 aa1.86□□□□□ -2.11
SMCHD1-206ENST00000581631 SNX32Q86XE0 403 aa1.86□□□□□ -2.11
SMCHD1-206ENST00000581631 UCN3Q969E3 161 aa1.86□□□□□ -2.11
SMCHD1-206ENST00000581631 RAB7BQ96AH8 199 aa1.86□□□□□ -2.11
SMCHD1-206ENST00000581631 CITED1Q99966 193 aa1.86□□□□□ -2.11
SMCHD1-206ENST00000581631 PLA2G2FQ9BZM2 168 aa1.86□□□□□ -2.11
SMCHD1-206ENST00000581631 MRPL39Q9NYK5 338 aaKnown RBP1.86□□□□□ -2.11
SMCHD1-206ENST00000581631 WRAP73Q9P2S5 460 aaPredicted RBP1.86□□□□□ -2.11
SMCHD1-206ENST00000581631 SPASTQ9UBP0 616 aa1.86□□□□□ -2.11
SMCHD1-206ENST00000581631 MTRF1LQ9UGC7 380 aaKnown RBP1.86□□□□□ -2.11
SMCHD1-206ENST00000581631 CRCT1Q9UGL9 99 aa1.86□□□□□ -2.11
SMCHD1-206ENST00000581631 IL19Q9UHD0 177 aa1.86□□□□□ -2.11
SMCHD1-206ENST00000581631 ATP6V1HQ9UI12 483 aa1.86□□□□□ -2.11
SMCHD1-206ENST00000581631 ANAPC7Q9UJX3 599 aa1.86□□□□□ -2.11
SMCHD1-206ENST00000581631 FOXJ3Q9UPW0 622 aa1.86□□□□□ -2.11
SMCHD1-206ENST00000581631 ARHGAP21Q5T5U3 1957 aa1.86□□□□□ -2.11
SMCHD1-206ENST00000581631 A0A1B0GWB2 263 aa1.85□□□□□ -2.11
SMCHD1-206ENST00000581631 LRCOL1A6NCL2 159 aa1.85□□□□□ -2.11
SMCHD1-206ENST00000581631 PP2D1A8MPX8 630 aa1.85□□□□□ -2.11
SMCHD1-206ENST00000581631 RIPK2O43353 540 aa1.85□□□□□ -2.11
SMCHD1-206ENST00000581631 OR10H3O60404 316 aa1.85□□□□□ -2.11
SMCHD1-206ENST00000581631 SLITRK3O94933 977 aa1.85□□□□□ -2.11
SMCHD1-206ENST00000581631 MT-ATP6P00846 226 aa1.85□□□□□ -2.11
SMCHD1-206ENST00000581631 CSF2P04141 144 aa1.85□□□□□ -2.11
SMCHD1-206ENST00000581631 ALPPP05187 535 aa1.85□□□□□ -2.11
SMCHD1-206ENST00000581631 MAGP20916 626 aa1.85□□□□□ -2.11
SMCHD1-206ENST00000581631 CSNK1DP48730 415 aa1.85□□□□□ -2.11
SMCHD1-206ENST00000581631 SUCLG1P53597 346 aaKnown RBP1.85□□□□□ -2.11
SMCHD1-206ENST00000581631 MTTPP55157 894 aa1.85□□□□□ -2.11
SMCHD1-206ENST00000581631 HERVK_113P61574 105 aa1.85□□□□□ -2.11
SMCHD1-206ENST00000581631 MADCAM1Q13477 382 aa1.85□□□□□ -2.11
SMCHD1-206ENST00000581631 EIF4EBP1Q13541 118 aaPredicted RBP1.85□□□□□ -2.11
SMCHD1-206ENST00000581631 CUL1Q13616 776 aa1.85□□□□□ -2.11
SMCHD1-206ENST00000581631 PDK1Q15118 436 aa1.85□□□□□ -2.11
SMCHD1-206ENST00000581631 SHHQ15465 462 aa1.85□□□□□ -2.11
SMCHD1-206ENST00000581631 ADPRMQ3LIE5 342 aa1.85□□□□□ -2.11
SMCHD1-206ENST00000581631 TOR1AIP1Q5JTV8 583 aa1.85□□□□□ -2.11
SMCHD1-206ENST00000581631 RABGAP1LQ5R372 815 aa1.85□□□□□ -2.11
SMCHD1-206ENST00000581631 TSPO2Q5TGU0 170 aa1.85□□□□□ -2.11
SMCHD1-206ENST00000581631 ACSM5Q6NUN0 579 aa1.85□□□□□ -2.11
SMCHD1-206ENST00000581631 ANKRD37Q7Z713 158 aa1.85□□□□□ -2.11
SMCHD1-206ENST00000581631 LINC01551Q86U37 167 aa1.85□□□□□ -2.11
SMCHD1-206ENST00000581631 FAM71CQ8NEG0 241 aa1.85□□□□□ -2.11
SMCHD1-206ENST00000581631 PAQR8Q8TEZ7 354 aa1.85□□□□□ -2.11
SMCHD1-206ENST00000581631 GIPC3Q8TF64 312 aa1.85□□□□□ -2.11
SMCHD1-206ENST00000581631 PIGCQ92535 297 aa1.85□□□□□ -2.11
SMCHD1-206ENST00000581631 RNF185Q96GF1 192 aa1.85□□□□□ -2.11
SMCHD1-206ENST00000581631 HPDLQ96IR7 371 aa1.85□□□□□ -2.11
SMCHD1-206ENST00000581631 SLC30A2Q9BRI3 323 aa1.85□□□□□ -2.11
SMCHD1-206ENST00000581631 RHOJQ9H4E5 214 aa1.85□□□□□ -2.11
SMCHD1-206ENST00000581631 ACTR8Q9H981 624 aa1.85□□□□□ -2.11
SMCHD1-206ENST00000581631 AIG1Q9NVV5 245 aa1.85□□□□□ -2.11
SMCHD1-206ENST00000581631 NECAP2Q9NVZ3 263 aa1.85□□□□□ -2.11
SMCHD1-206ENST00000581631 B3GNT2Q9NY97 397 aa1.85□□□□□ -2.11
SMCHD1-206ENST00000581631 RDH8Q9NYR8 311 aa1.85□□□□□ -2.11
SMCHD1-206ENST00000581631 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP1.85□□□□□ -2.11
SMCHD1-206ENST00000581631 ZNF282Q9UDV7 671 aaPredicted RBP1.85□□□□□ -2.11
SMCHD1-206ENST00000581631 TP53TG5Q9Y2B4 290 aa1.85□□□□□ -2.11
SMCHD1-206ENST00000581631 NEUROG3Q9Y4Z2 214 aa1.85□□□□□ -2.11
SMCHD1-206ENST00000581631 PTCH1Q13635 1447 aa1.84□□□□□ -2.11
SMCHD1-206ENST00000581631 IGLV4-69A0A075B6H9 119 aa1.84□□□□□ -2.11
SMCHD1-206ENST00000581631 A0A0G2JRQ6 117 aa1.84□□□□□ -2.11
SMCHD1-206ENST00000581631 FAM230AA0A1W2PPH8 454 aa1.84□□□□□ -2.11
SMCHD1-206ENST00000581631 NKX2-6A6NCS4 301 aa1.84□□□□□ -2.11
SMCHD1-206ENST00000581631 ANKRD30BLA7E2S9 258 aa1.84□□□□□ -2.11
SMCHD1-206ENST00000581631 GFYI3L273 518 aa1.84□□□□□ -2.11
SMCHD1-206ENST00000581631 KIF2AO00139 706 aaPredicted RBP1.84□□□□□ -2.11
SMCHD1-206ENST00000581631 DLGAP1O14490 977 aa1.84□□□□□ -2.11
SMCHD1-206ENST00000581631 STX7O15400 261 aaKnown RBP1.84□□□□□ -2.11
SMCHD1-206ENST00000581631 SSX5O60225 188 aa1.84□□□□□ -2.11
SMCHD1-206ENST00000581631 FAM189A1O60320 539 aa1.84□□□□□ -2.11
SMCHD1-206ENST00000581631 F10P00742 488 aa1.84□□□□□ -2.11
SMCHD1-206ENST00000581631 CLUP10909 449 aa1.84□□□□□ -2.11
SMCHD1-206ENST00000581631 NMT1P30419 496 aaKnown RBP1.84□□□□□ -2.11
SMCHD1-206ENST00000581631 PMELP40967 661 aa1.84□□□□□ -2.11
SMCHD1-206ENST00000581631 ATXN3P54252 364 aaPredicted RBP1.84□□□□□ -2.11
SMCHD1-206ENST00000581631 CCDC173Q0VFZ6 552 aa1.84□□□□□ -2.11
SMCHD1-206ENST00000581631 GGTLC2Q14390 218 aa1.84□□□□□ -2.11
SMCHD1-206ENST00000581631 ATXN7L3Q14CW9 347 aaPredicted RBP1.84□□□□□ -2.11
SMCHD1-206ENST00000581631 C1orf146Q5VVC0 180 aa1.84□□□□□ -2.11
SMCHD1-206ENST00000581631 LRRC31Q6UY01 552 aa1.84□□□□□ -2.11
SMCHD1-206ENST00000581631 ACP7Q6ZNF0 438 aa1.84□□□□□ -2.11
SMCHD1-206ENST00000581631 APTXQ7Z2E3 356 aaKnown RBP1.84□□□□□ -2.11
SMCHD1-206ENST00000581631 ERASQ7Z444 233 aa1.84□□□□□ -2.11
SMCHD1-206ENST00000581631 ZNF713Q8N859 430 aaPredicted RBP1.84□□□□□ -2.11
SMCHD1-206ENST00000581631 OR51G1Q8NGK1 321 aa1.84□□□□□ -2.11
SMCHD1-206ENST00000581631 TMEM158Q8WZ71 300 aa1.84□□□□□ -2.11
SMCHD1-206ENST00000581631 PINX1Q96BK5 328 aaKnown RBP1.84□□□□□ -2.11
SMCHD1-206ENST00000581631 PGLYRP4Q96LB8 373 aa1.84□□□□□ -2.11
SMCHD1-206ENST00000581631 OR2M2Q96R28 347 aa1.84□□□□□ -2.11
SMCHD1-206ENST00000581631 RASL11BQ9BPW5 248 aa1.84□□□□□ -2.11
SMCHD1-206ENST00000581631 KLHDC3Q9BQ90 382 aa1.84□□□□□ -2.11
SMCHD1-206ENST00000581631 DUSP16Q9BY84 665 aa1.84□□□□□ -2.11
SMCHD1-206ENST00000581631 STOX2Q9P2F5 926 aaPredicted RBP1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms