RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 CYSRT1A8MQ03 144 aa11.36□□□□□ -0.59
SNORD55-201ENST00000581525 SHISA8B8ZZ34 492 aa11.36□□□□□ -0.59
SNORD55-201ENST00000581525 H0Y3Z8 333 aa11.36□□□□□ -0.59
SNORD55-201ENST00000581525 H0YC42 278 aa11.36□□□□□ -0.59
SNORD55-201ENST00000581525 C19orf84I3L1E1 186 aa11.36□□□□□ -0.59
SNORD55-201ENST00000581525 SYT5O00445 386 aa11.36□□□□□ -0.59
SNORD55-201ENST00000581525 NR5A2O00482 541 aa11.36□□□□□ -0.59
SNORD55-201ENST00000581525 DYNC1I1O14576 645 aa11.36□□□□□ -0.59
SNORD55-201ENST00000581525 ADAM11O75078 769 aa11.36□□□□□ -0.59
SNORD55-201ENST00000581525 BCAS1O75363 584 aaPredicted RBP11.36□□□□□ -0.59
SNORD55-201ENST00000581525 TGM6O95932 706 aa11.36□□□□□ -0.59
SNORD55-201ENST00000581525 DBIP07108 87 aaKnown RBP11.36□□□□□ -0.59
SNORD55-201ENST00000581525 THBS1P07996 1170 aa11.36□□□□□ -0.59
SNORD55-201ENST00000581525 ARAFP10398 606 aa11.36□□□□□ -0.59
SNORD55-201ENST00000581525 NR2F1P10589 423 aa11.36□□□□□ -0.59
SNORD55-201ENST00000581525 PGCP20142 388 aa11.36□□□□□ -0.59
SNORD55-201ENST00000581525 CRISP3P54108 245 aa11.36□□□□□ -0.59
SNORD55-201ENST00000581525 TPD52P55327 224 aaPredicted RBP11.36□□□□□ -0.59
SNORD55-201ENST00000581525 CBFBQ13951 182 aa11.36□□□□□ -0.59
SNORD55-201ENST00000581525 ADRM1Q16186 407 aa11.36□□□□□ -0.59
SNORD55-201ENST00000581525 HIST2H2BCQ6DN03 193 aa11.36□□□□□ -0.59
SNORD55-201ENST00000581525 C10orf111Q8N326 155 aa11.36□□□□□ -0.59
SNORD55-201ENST00000581525 OR5M1Q8NGP8 315 aa11.36□□□□□ -0.59
SNORD55-201ENST00000581525 FBXO27Q8NI29 283 aa11.36□□□□□ -0.59
SNORD55-201ENST00000581525 C10orf82Q8WW14 230 aa11.36□□□□□ -0.59
SNORD55-201ENST00000581525 SLC35B4Q969S0 331 aa11.36□□□□□ -0.59
SNORD55-201ENST00000581525 RNF145Q96MT1 663 aa11.36□□□□□ -0.59
SNORD55-201ENST00000581525 ANKRD27Q96NW4 1050 aa11.36□□□□□ -0.59
SNORD55-201ENST00000581525 THUMPD3Q9BV44 507 aaKnown RBP11.36□□□□□ -0.59
SNORD55-201ENST00000581525 RSPO3Q9BXY4 272 aaPredicted RBP11.36□□□□□ -0.59
SNORD55-201ENST00000581525 UCK2Q9BZX2 261 aa11.36□□□□□ -0.59
SNORD55-201ENST00000581525 IKZF5Q9H5V7 419 aa11.36□□□□□ -0.59
SNORD55-201ENST00000581525 CORO2BQ9UQ03 480 aa11.36□□□□□ -0.59
SNORD55-201ENST00000581525 CHST2Q9Y4C5 530 aa11.36□□□□□ -0.59
SNORD55-201ENST00000581525 FBN2P35556 2912 aa11.35□□□□□ -0.59
SNORD55-201ENST00000581525 A0A0J9YW62 118 aa11.35□□□□□ -0.59
SNORD55-201ENST00000581525 CDHR4A6H8M9 788 aa11.35□□□□□ -0.59
SNORD55-201ENST00000581525 H3BML4 177 aa11.35□□□□□ -0.59
SNORD55-201ENST00000581525 FBP2O00757 339 aa11.35□□□□□ -0.59
SNORD55-201ENST00000581525 DVL2O14641 736 aa11.35□□□□□ -0.59
SNORD55-201ENST00000581525 HNRNPRO43390 633 aaKnown RBP11.35□□□□□ -0.59
SNORD55-201ENST00000581525 NUDT7P0C024 238 aa11.35□□□□□ -0.59
SNORD55-201ENST00000581525 ETS2P15036 469 aa11.35□□□□□ -0.59
SNORD55-201ENST00000581525 FKBP2P26885 142 aaKnown RBP11.35□□□□□ -0.59
SNORD55-201ENST00000581525 OPRM1P35372 400 aa11.35□□□□□ -0.59
SNORD55-201ENST00000581525 SLC6A8P48029 635 aa11.35□□□□□ -0.59
SNORD55-201ENST00000581525 SESN3P58005 492 aa11.35□□□□□ -0.59
SNORD55-201ENST00000581525 RPS3AP61247 264 aaKnown RBP11.35□□□□□ -0.59
SNORD55-201ENST00000581525 SRYQ05066 204 aa11.35□□□□□ -0.59
SNORD55-201ENST00000581525 KLF10Q13118 480 aa11.35□□□□□ -0.59
SNORD55-201ENST00000581525 QPRTQ15274 297 aa11.35□□□□□ -0.59
SNORD55-201ENST00000581525 NDUFAF6Q330K2 333 aa11.35□□□□□ -0.59
SNORD55-201ENST00000581525 RNF220Q5VTB9 566 aa11.35□□□□□ -0.59
SNORD55-201ENST00000581525 DNAJC14Q6Y2X3 702 aaPredicted RBP11.35□□□□□ -0.59
SNORD55-201ENST00000581525 NET1Q7Z628 596 aaPredicted RBP11.35□□□□□ -0.59
SNORD55-201ENST00000581525 RELL2Q8NC24 303 aaPredicted RBP11.35□□□□□ -0.59
SNORD55-201ENST00000581525 CNOT9Q92600 299 aaKnown RBP11.35□□□□□ -0.59
SNORD55-201ENST00000581525 TMEM19Q96HH6 336 aa11.35□□□□□ -0.59
SNORD55-201ENST00000581525 CGREF1Q99674 301 aa11.35□□□□□ -0.59
SNORD55-201ENST00000581525 CPPED1Q9BRF8 314 aaPredicted RBP11.35□□□□□ -0.59
SNORD55-201ENST00000581525 CCDC106Q9BWC9 280 aa11.35□□□□□ -0.59
SNORD55-201ENST00000581525 SFXN3Q9BWM7 321 aa11.35□□□□□ -0.59
SNORD55-201ENST00000581525 QRSL1Q9H0R6 528 aaKnown RBP11.35□□□□□ -0.59
SNORD55-201ENST00000581525 RNF122Q9H9V4 155 aa11.35□□□□□ -0.59
SNORD55-201ENST00000581525 NPDC1Q9NQX5 325 aaPredicted RBP11.35□□□□□ -0.59
SNORD55-201ENST00000581525 DNAJB12Q9NXW2 375 aaKnown RBP11.35□□□□□ -0.59
SNORD55-201ENST00000581525 IFT52Q9Y366 437 aa11.35□□□□□ -0.59
SNORD55-201ENST00000581525 CLDN24A6NM45 220 aa11.34□□□□□ -0.59
SNORD55-201ENST00000581525 EVPLLA8MZ36 301 aa11.34□□□□□ -0.59
SNORD55-201ENST00000581525 TNFSF13O75888 250 aa11.34□□□□□ -0.59
SNORD55-201ENST00000581525 PGM3O95394 542 aa11.34□□□□□ -0.59
SNORD55-201ENST00000581525 BCHEP06276 602 aa11.34□□□□□ -0.59
SNORD55-201ENST00000581525 UBTFL6P0CB48 400 aaPredicted RBP11.34□□□□□ -0.59
SNORD55-201ENST00000581525 IL11P20809 199 aa11.34□□□□□ -0.59
SNORD55-201ENST00000581525 APOBEC1P41238 236 aaKnown RBP11.34□□□□□ -0.59
SNORD55-201ENST00000581525 ACAA2P42765 397 aaKnown RBP11.34□□□□□ -0.59
SNORD55-201ENST00000581525 GZMMP51124 257 aa11.34□□□□□ -0.59
SNORD55-201ENST00000581525 MAP2K6P52564 334 aa11.34□□□□□ -0.59
SNORD55-201ENST00000581525 HPCAP84074 193 aa11.34□□□□□ -0.59
SNORD55-201ENST00000581525 RBBP4Q09028 425 aa11.34□□□□□ -0.59
SNORD55-201ENST00000581525 FOXF1Q12946 379 aa11.34□□□□□ -0.59
SNORD55-201ENST00000581525 ZNF787Q6DD87 383 aa11.34□□□□□ -0.59
SNORD55-201ENST00000581525 OR2A2Q6IF42 318 aa11.34□□□□□ -0.59
SNORD55-201ENST00000581525 DMRTC2Q8IXT2 367 aaPredicted RBP11.34□□□□□ -0.59
SNORD55-201ENST00000581525 PEX5LQ8IYB4 626 aa11.34□□□□□ -0.59
SNORD55-201ENST00000581525 ZNF440Q8IYI8 595 aa11.34□□□□□ -0.59
SNORD55-201ENST00000581525 LILRA2Q8N149 483 aa11.34□□□□□ -0.59
SNORD55-201ENST00000581525 ZNF614Q8N883 585 aa11.34□□□□□ -0.59
SNORD55-201ENST00000581525 OR52P1PQ8NH57 321 aa11.34□□□□□ -0.59
SNORD55-201ENST00000581525 BBS10Q8TAM1 723 aa11.34□□□□□ -0.59
SNORD55-201ENST00000581525 WDR60Q8WVS4 1066 aa11.34□□□□□ -0.59
SNORD55-201ENST00000581525 TMEM234Q8WY98 164 aa11.34□□□□□ -0.59
SNORD55-201ENST00000581525 FIG4Q92562 907 aa11.34□□□□□ -0.59
SNORD55-201ENST00000581525 KLHL15Q96M94 604 aa11.34□□□□□ -0.59
SNORD55-201ENST00000581525 SPATA9Q9BWV2 254 aa11.34□□□□□ -0.59
SNORD55-201ENST00000581525 ADAM19Q9H013 955 aa11.34□□□□□ -0.59
SNORD55-201ENST00000581525 KAT8Q9H7Z6 458 aaKnown RBP11.34□□□□□ -0.59
SNORD55-201ENST00000581525 FOXD3Q9UJU5 478 aaPredicted RBP11.34□□□□□ -0.59
SNORD55-201ENST00000581525 HEATR5AQ86XA9 2040 aa11.34□□□□□ -0.59
SNORD55-201ENST00000581525 KIAA1549Q9HCM3 1950 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms