RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 AGAP6Q5VW22 663 aa3.53□□□□□ -1.84
NF1-220ENST00000581113 C6orf89Q6UWU4 347 aa3.53□□□□□ -1.84
NF1-220ENST00000581113 DLEU7Q6UYE1 221 aa3.53□□□□□ -1.84
NF1-220ENST00000581113 CARM1Q86X55 608 aa3.53□□□□□ -1.84
NF1-220ENST00000581113 ITPRIPQ8IWB1 547 aa3.53□□□□□ -1.84
NF1-220ENST00000581113 SYCE1Q8N0S2 351 aa3.53□□□□□ -1.84
NF1-220ENST00000581113 ARFGAP2Q8N6H7 521 aa3.53□□□□□ -1.84
NF1-220ENST00000581113 GPR148Q8TDV2 347 aa3.53□□□□□ -1.84
NF1-220ENST00000581113 TOMM40LQ969M1 308 aa3.53□□□□□ -1.84
NF1-220ENST00000581113 ISG20Q96AZ6 181 aaKnown RBP3.53□□□□□ -1.84
NF1-220ENST00000581113 ANKRD27Q96NW4 1050 aa3.53□□□□□ -1.84
NF1-220ENST00000581113 TAAR6Q96RI8 345 aa3.53□□□□□ -1.84
NF1-220ENST00000581113 TNFRSF13CQ96RJ3 184 aa3.53□□□□□ -1.84
NF1-220ENST00000581113 C11orf70Q9BRQ4 267 aa3.53□□□□□ -1.84
NF1-220ENST00000581113 CCM2Q9BSQ5 444 aa3.53□□□□□ -1.84
NF1-220ENST00000581113 CRNKL1Q9BZJ0 848 aaKnown RBP3.53□□□□□ -1.84
NF1-220ENST00000581113 MOB1AQ9H8S9 216 aa3.53□□□□□ -1.84
NF1-220ENST00000581113 VIPAS39Q9H9C1 493 aa3.53□□□□□ -1.84
NF1-220ENST00000581113 CALHM2Q9HA72 323 aa3.53□□□□□ -1.84
NF1-220ENST00000581113 LY9Q9HBG7 655 aa3.53□□□□□ -1.84
NF1-220ENST00000581113 S100A14Q9HCY8 104 aa3.53□□□□□ -1.84
NF1-220ENST00000581113 MRPL47Q9HD33 250 aaKnown RBP3.53□□□□□ -1.84
NF1-220ENST00000581113 PACSIN2Q9UNF0 486 aaPredicted RBP3.53□□□□□ -1.84
NF1-220ENST00000581113 MGAT4BQ9UQ53 548 aa3.53□□□□□ -1.84
NF1-220ENST00000581113 ENTPD4Q9Y227 616 aa3.53□□□□□ -1.84
NF1-220ENST00000581113 STYXL1Q9Y6J8 313 aa3.53□□□□□ -1.84
NF1-220ENST00000581113 PCNX3Q9H6A9 2034 aa3.52□□□□□ -1.85
NF1-220ENST00000581113 OTOFQ9HC10 1997 aa3.52□□□□□ -1.85
NF1-220ENST00000581113 A0A087X0K7 114 aa3.52□□□□□ -1.85
NF1-220ENST00000581113 SERINC4A6NH21 518 aa3.52□□□□□ -1.85
NF1-220ENST00000581113 FOXE1O00358 373 aaPredicted RBP3.52□□□□□ -1.85
NF1-220ENST00000581113 ALOX15BO15296 676 aa3.52□□□□□ -1.85
NF1-220ENST00000581113 YKT6O15498 198 aa3.52□□□□□ -1.85
NF1-220ENST00000581113 ZNF208O43345 1280 aa3.52□□□□□ -1.85
NF1-220ENST00000581113 ATP6V1G1O75348 118 aa3.52□□□□□ -1.85
NF1-220ENST00000581113 VPS26AO75436 327 aa3.52□□□□□ -1.85
NF1-220ENST00000581113 CSDE1O75534 798 aaKnown RBP3.52□□□□□ -1.85
NF1-220ENST00000581113 FGF19O95750 216 aa3.52□□□□□ -1.85
NF1-220ENST00000581113 IVLP07476 585 aa3.52□□□□□ -1.85
NF1-220ENST00000581113 LYNP07948 512 aa3.52□□□□□ -1.85
NF1-220ENST00000581113 EZRP15311 586 aaKnown RBP3.52□□□□□ -1.85
NF1-220ENST00000581113 U2AF2P26368 475 aaKnown RBP eCLIP3.52□□□□□ -1.852e-7■■■■□ 22.2
NF1-220ENST00000581113 OTX2P32243 289 aa3.52□□□□□ -1.85
NF1-220ENST00000581113 RPL9P32969 192 aaKnown RBP3.52□□□□□ -1.85
NF1-220ENST00000581113 SYKP43405 635 aa3.52□□□□□ -1.85
NF1-220ENST00000581113 FNTAP49354 379 aa3.52□□□□□ -1.85
NF1-220ENST00000581113 RIDAP52758 137 aaKnown RBP3.52□□□□□ -1.85
NF1-220ENST00000581113 CRYBB1P53674 252 aaPredicted RBP3.52□□□□□ -1.85
NF1-220ENST00000581113 OTUD4Q01804 1114 aaKnown RBP3.52□□□□□ -1.85
NF1-220ENST00000581113 ZFP36L1Q07352 338 aaKnown RBP3.52□□□□□ -1.85
NF1-220ENST00000581113 ARHGAP1Q07960 439 aa3.52□□□□□ -1.85
NF1-220ENST00000581113 MPPE1Q53F39 396 aa3.52□□□□□ -1.85
NF1-220ENST00000581113 ZNF774Q6NX45 483 aa3.52□□□□□ -1.85
NF1-220ENST00000581113 TTC23LQ6PF05 361 aa3.52□□□□□ -1.85
NF1-220ENST00000581113 KDM7AQ6ZMT4 941 aa3.52□□□□□ -1.85
NF1-220ENST00000581113 ZNF600Q6ZNG1 722 aa3.52□□□□□ -1.85
NF1-220ENST00000581113 ASPGQ86U10 573 aa3.52□□□□□ -1.85
NF1-220ENST00000581113 BIVMQ86UB2 503 aa3.52□□□□□ -1.85
NF1-220ENST00000581113 CDC20BQ86Y33 519 aa3.52□□□□□ -1.85
NF1-220ENST00000581113 SIAH3Q8IW03 269 aa3.52□□□□□ -1.85
NF1-220ENST00000581113 EFCAB13Q8IY85 973 aa3.52□□□□□ -1.85
NF1-220ENST00000581113 KLHDC8AQ8IYD2 350 aa3.52□□□□□ -1.85
NF1-220ENST00000581113 KATNAL2Q8IYT4 538 aa3.52□□□□□ -1.85
NF1-220ENST00000581113 UBQLNLQ8IYU4 475 aa3.52□□□□□ -1.85
NF1-220ENST00000581113 ZNF444Q8N0Y2 327 aaPredicted RBP3.52□□□□□ -1.85
NF1-220ENST00000581113 RNF148Q8N7C7 305 aa3.52□□□□□ -1.85
NF1-220ENST00000581113 ZNF565Q8N9K5 539 aa3.52□□□□□ -1.85
NF1-220ENST00000581113 MINDY2Q8NBR6 621 aa3.52□□□□□ -1.85
NF1-220ENST00000581113 STKLD1Q8NE28 680 aa3.52□□□□□ -1.85
NF1-220ENST00000581113 RAB3IL1Q8TBN0 382 aa3.52□□□□□ -1.85
NF1-220ENST00000581113 PIBF1Q8WXW3 757 aa3.52□□□□□ -1.85
NF1-220ENST00000581113 LRRC45Q96CN5 670 aa3.52□□□□□ -1.85
NF1-220ENST00000581113 MSANTD3Q96H12 275 aa3.52□□□□□ -1.85
NF1-220ENST00000581113 FOXN4Q96NZ1 517 aa3.52□□□□□ -1.85
NF1-220ENST00000581113 CCDC28BQ9BUN5 200 aa3.52□□□□□ -1.85
NF1-220ENST00000581113 NUP58Q9BVL2 599 aa3.52□□□□□ -1.85
NF1-220ENST00000581113 SLC26A1Q9H2B4 701 aa3.52□□□□□ -1.85
NF1-220ENST00000581113 TMEM231Q9H6L2 316 aa3.52□□□□□ -1.85
NF1-220ENST00000581113 ZNF665Q9H7R5 613 aa3.52□□□□□ -1.85
NF1-220ENST00000581113 VAT1LQ9HCJ6 419 aa3.52□□□□□ -1.85
NF1-220ENST00000581113 FAM120CQ9NX05 1096 aaKnown RBP3.52□□□□□ -1.85
NF1-220ENST00000581113 PDP1Q9P0J1 537 aaPredicted RBP3.52□□□□□ -1.85
NF1-220ENST00000581113 ZNF319Q9P2F9 582 aa3.52□□□□□ -1.85
NF1-220ENST00000581113 ONECUT1Q9UBC0 465 aa3.52□□□□□ -1.85
NF1-220ENST00000581113 RNF24Q9Y225 148 aa3.52□□□□□ -1.85
NF1-220ENST00000581113 MRPS7Q9Y2R9 242 aaKnown RBP3.52□□□□□ -1.85
NF1-220ENST00000581113 LAMB1P07942 1786 aa3.51□□□□□ -1.85
NF1-220ENST00000581113 ZBED9Q6R2W3 1325 aa3.51□□□□□ -1.85
NF1-220ENST00000581113 SLC15A5A6NIM6 579 aa3.51□□□□□ -1.85
NF1-220ENST00000581113 TEX46H3BTG2 121 aa3.51□□□□□ -1.85
NF1-220ENST00000581113 ABCD4O14678 606 aa3.51□□□□□ -1.85
NF1-220ENST00000581113 GALR3O60755 368 aaPredicted RBP3.51□□□□□ -1.85
NF1-220ENST00000581113 CSO75390 466 aaKnown RBP3.51□□□□□ -1.85
NF1-220ENST00000581113 RHOBTB1O94844 696 aa3.51□□□□□ -1.85
NF1-220ENST00000581113 KLHL2O95198 593 aa3.51□□□□□ -1.85
NF1-220ENST00000581113 TGM6O95932 706 aa3.51□□□□□ -1.85
NF1-220ENST00000581113 AGTP01019 485 aa3.51□□□□□ -1.85
NF1-220ENST00000581113 B4GALT1P15291 398 aa3.51□□□□□ -1.85
NF1-220ENST00000581113 RGS4P49798 205 aa3.51□□□□□ -1.85
NF1-220ENST00000581113 CCR4P51679 360 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms