RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 STON2Q8WXE9 905 aa13.32□□□□□ -0.28
SS18-212ENST00000579061 ST8SIA1Q92185 356 aa13.32□□□□□ -0.28
SS18-212ENST00000579061 KLHL15Q96M94 604 aa13.32□□□□□ -0.28
SS18-212ENST00000579061 PRRG4Q9BZD6 226 aa13.32□□□□□ -0.28
SS18-212ENST00000579061 GLRX2Q9NS18 164 aa13.32□□□□□ -0.28
SS18-212ENST00000579061 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.32□□□□□ -0.28
SS18-212ENST00000579061 TMEM45AQ9NWC5 275 aa13.32□□□□□ -0.28
SS18-212ENST00000579061 GALNT8Q9NY28 637 aa13.32□□□□□ -0.28
SS18-212ENST00000579061 ABCA4P78363 2273 aa13.31□□□□□ -0.28
SS18-212ENST00000579061 CENPVL1A0A0U1RR11 272 aa13.31□□□□□ -0.28
SS18-212ENST00000579061 TNFSF11O14788 317 aa13.31□□□□□ -0.28
SS18-212ENST00000579061 EFNA2O43921 213 aa13.31□□□□□ -0.28
SS18-212ENST00000579061 AQP8O94778 261 aa13.31□□□□□ -0.28
SS18-212ENST00000579061 H6PDO95479 791 aa13.31□□□□□ -0.28
SS18-212ENST00000579061 ANP32DO95626 131 aa13.31□□□□□ -0.28
SS18-212ENST00000579061 GSNP06396 782 aa13.31□□□□□ -0.28
SS18-212ENST00000579061 CD8BP10966 210 aa13.31□□□□□ -0.28
SS18-212ENST00000579061 EPXP11678 715 aa13.31□□□□□ -0.28
SS18-212ENST00000579061 PGCP20142 388 aa13.31□□□□□ -0.28
SS18-212ENST00000579061 PGM1P36871 562 aa13.31□□□□□ -0.28
SS18-212ENST00000579061 IDH3AP50213 366 aa13.31□□□□□ -0.28
SS18-212ENST00000579061 RNF144AP50876 292 aaPredicted RBP13.31□□□□□ -0.28
SS18-212ENST00000579061 CCR4P51679 360 aa13.31□□□□□ -0.28
SS18-212ENST00000579061 KCNJ10P78508 379 aa13.31□□□□□ -0.28
SS18-212ENST00000579061 CHRNEQ04844 493 aa13.31□□□□□ -0.28
SS18-212ENST00000579061 SELENBP1Q13228 472 aa13.31□□□□□ -0.28
SS18-212ENST00000579061 QPRTQ15274 297 aa13.31□□□□□ -0.28
SS18-212ENST00000579061 MAPK14Q16539 360 aa13.31□□□□□ -0.28
SS18-212ENST00000579061 GPAT3Q53EU6 434 aa13.31□□□□□ -0.28
SS18-212ENST00000579061 HBMQ6B0K9 141 aa13.31□□□□□ -0.28
SS18-212ENST00000579061 VWA1Q6PCB0 445 aa13.31□□□□□ -0.28
SS18-212ENST00000579061 FAM214BQ7L5A3 538 aa13.31□□□□□ -0.28
SS18-212ENST00000579061 OLIG3Q7RTU3 272 aa13.31□□□□□ -0.28
SS18-212ENST00000579061 BTLAQ7Z6A9 289 aa13.31□□□□□ -0.28
SS18-212ENST00000579061 CMIPQ8IY22 773 aa13.31□□□□□ -0.28
SS18-212ENST00000579061 ZZZ3Q8IYH5 903 aa13.31□□□□□ -0.28
SS18-212ENST00000579061 CNEP1R1Q8N9A8 125 aa13.31□□□□□ -0.28
SS18-212ENST00000579061 OR9I1Q8NGQ6 314 aa13.31□□□□□ -0.28
SS18-212ENST00000579061 RFWD2Q8NHY2 731 aa13.31□□□□□ -0.28
SS18-212ENST00000579061 TMEM234Q8WY98 164 aa13.31□□□□□ -0.28
SS18-212ENST00000579061 GMPPAQ96IJ6 420 aaPredicted RBP13.31□□□□□ -0.28
SS18-212ENST00000579061 MAGEB18Q96M61 343 aa13.31□□□□□ -0.28
SS18-212ENST00000579061 THUMPD3Q9BV44 507 aaKnown RBP13.31□□□□□ -0.28
SS18-212ENST00000579061 SLC38A1Q9H2H9 487 aa13.31□□□□□ -0.28
SS18-212ENST00000579061 TIGARQ9NQ88 270 aa13.31□□□□□ -0.28
SS18-212ENST00000579061 EXOSC3Q9NQT5 275 aaKnown RBP13.31□□□□□ -0.28
SS18-212ENST00000579061 CSMD1Q96PZ7 3565 aa13.31□□□□□ -0.28
SS18-212ENST00000579061 CCDC168Q8NDH2 2452 aa13.3□□□□□ -0.28
SS18-212ENST00000579061 CXCL13O43927 109 aa13.3□□□□□ -0.28
SS18-212ENST00000579061 CTAG2O75638 210 aa13.3□□□□□ -0.28
SS18-212ENST00000579061 CGAP01215 116 aa13.3□□□□□ -0.28
SS18-212ENST00000579061 C1QCP02747 245 aa13.3□□□□□ -0.28
SS18-212ENST00000579061 PABPC4LP0CB38 370 aaKnown RBP13.3□□□□□ -0.28
SS18-212ENST00000579061 NID1P14543 1247 aa13.3□□□□□ -0.28
SS18-212ENST00000579061 IL11P20809 199 aa13.3□□□□□ -0.28
SS18-212ENST00000579061 SFTPDP35247 375 aa13.3□□□□□ -0.28
SS18-212ENST00000579061 MVDP53602 400 aa13.3□□□□□ -0.28
SS18-212ENST00000579061 CARD18P57730 90 aa13.3□□□□□ -0.28
SS18-212ENST00000579061 SNTB1Q13884 538 aaKnown RBP13.3□□□□□ -0.28
SS18-212ENST00000579061 SYPL1Q16563 259 aa13.3□□□□□ -0.28
SS18-212ENST00000579061 TIGD2Q4W5G0 525 aa13.3□□□□□ -0.28
SS18-212ENST00000579061 COX20Q5RI15 118 aa13.3□□□□□ -0.28
SS18-212ENST00000579061 GTF2IRD2BQ6EKJ0 949 aa13.3□□□□□ -0.28
SS18-212ENST00000579061 GTF2IRD2Q86UP8 949 aa13.3□□□□□ -0.28
SS18-212ENST00000579061 TMEM200AQ86VY9 491 aa13.3□□□□□ -0.28
SS18-212ENST00000579061 OSTF1Q92882 214 aa13.3□□□□□ -0.28
SS18-212ENST00000579061 CPNE4Q96A23 557 aaPredicted RBP13.3□□□□□ -0.28
SS18-212ENST00000579061 ZG16BQ96DA0 208 aa13.3□□□□□ -0.28
SS18-212ENST00000579061 EBF4Q9BQW3 602 aa13.3□□□□□ -0.28
SS18-212ENST00000579061 TMEM185BQ9H7F4 350 aa13.3□□□□□ -0.28
SS18-212ENST00000579061 MTHFD2LQ9H903 347 aaPredicted RBP13.3□□□□□ -0.28
SS18-212ENST00000579061 TPT1P8Q9HAU6 139 aa13.3□□□□□ -0.28
SS18-212ENST00000579061 SLC6A13Q9NSD5 602 aa13.3□□□□□ -0.28
SS18-212ENST00000579061 THUMPD1Q9NXG2 353 aaKnown RBP13.3□□□□□ -0.28
SS18-212ENST00000579061 CALML5Q9NZT1 146 aa13.3□□□□□ -0.28
SS18-212ENST00000579061 EMC9Q9Y3B6 208 aa13.3□□□□□ -0.28
SS18-212ENST00000579061 CSMD2Q7Z408 3487 aa13.3□□□□□ -0.28
SS18-212ENST00000579061 AGAP5A6NIR3 686 aa13.29□□□□□ -0.28
SS18-212ENST00000579061 A6NNC1 897 aa13.29□□□□□ -0.28
SS18-212ENST00000579061 SS18L1O75177 396 aaPredicted RBP13.29□□□□□ -0.28
SS18-212ENST00000579061 CYP7B1O75881 506 aa13.29□□□□□ -0.28
SS18-212ENST00000579061 SMNDC1O75940 238 aaKnown RBP eCLIP13.29□□□□□ -0.28
SS18-212ENST00000579061 SASH3O75995 380 aa13.29□□□□□ -0.28
SS18-212ENST00000579061 OPN1LWP04000 364 aa13.29□□□□□ -0.28
SS18-212ENST00000579061 CHRM4P08173 479 aa13.29□□□□□ -0.28
SS18-212ENST00000579061 UBTFL6P0CB48 400 aaPredicted RBP13.29□□□□□ -0.28
SS18-212ENST00000579061 NR2F1P10589 423 aa13.29□□□□□ -0.28
SS18-212ENST00000579061 RPS4Y1P22090 263 aaKnown RBP13.29□□□□□ -0.28
SS18-212ENST00000579061 SHC1P29353 583 aa13.29□□□□□ -0.28
SS18-212ENST00000579061 SLC6A8P48029 635 aa13.29□□□□□ -0.28
SS18-212ENST00000579061 ATP4BP51164 291 aa13.29□□□□□ -0.28
SS18-212ENST00000579061 AQP5P55064 265 aa13.29□□□□□ -0.28
SS18-212ENST00000579061 SIRPAP78324 504 aa13.29□□□□□ -0.28
SS18-212ENST00000579061 TMEM176BQ3YBM2 270 aaPredicted RBP13.29□□□□□ -0.28
SS18-212ENST00000579061 C6orf10Q5SRN2 563 aa13.29□□□□□ -0.28
SS18-212ENST00000579061 C3orf33Q6P1S2 294 aa13.29□□□□□ -0.28
SS18-212ENST00000579061 CDH24Q86UP0 819 aa13.29□□□□□ -0.28
SS18-212ENST00000579061 ANKFN1Q8N957 763 aa13.29□□□□□ -0.28
SS18-212ENST00000579061 OR6K3Q8NGY3 331 aa13.29□□□□□ -0.28
SS18-212ENST00000579061 GTF2H4Q92759 462 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms