RNA–Protein interactions for RNA: ENST00000578985.5

IFT20-208, Transcript of intraflagellar transport 20, humanhuman

TSL 3 BASIC

Gene IFT20, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-208ENST00000578985 QPRTQ15274 297 aa13.91□□□□□ -0.18
IFT20-208ENST00000578985 TOMM34Q15785 309 aaPredicted RBP13.91□□□□□ -0.18
IFT20-208ENST00000578985 BCL2A1Q16548 175 aa13.91□□□□□ -0.18
IFT20-208ENST00000578985 VMACQ2NL98 169 aa13.91□□□□□ -0.18
IFT20-208ENST00000578985 C1orf185Q5T7R7 199 aa13.91□□□□□ -0.18
IFT20-208ENST00000578985 RNF220Q5VTB9 566 aa13.91□□□□□ -0.18
IFT20-208ENST00000578985 CLEC18BQ6UXF7 455 aa13.91□□□□□ -0.18
IFT20-208ENST00000578985 ZNF440Q8IYI8 595 aa13.91□□□□□ -0.18
IFT20-208ENST00000578985 CLIP4Q8N3C7 705 aa13.91□□□□□ -0.18
IFT20-208ENST00000578985 CLEC18CQ8NCF0 446 aa13.91□□□□□ -0.18
IFT20-208ENST00000578985 POC1BQ8TC44 478 aa13.91□□□□□ -0.18
IFT20-208ENST00000578985 REXO5Q96IC2 774 aaKnown RBP13.91□□□□□ -0.18
IFT20-208ENST00000578985 RNF145Q96MT1 663 aa13.91□□□□□ -0.18
IFT20-208ENST00000578985 ZNF583Q96ND8 569 aa13.91□□□□□ -0.18
IFT20-208ENST00000578985 NPAS1Q99742 590 aa13.91□□□□□ -0.18
IFT20-208ENST00000578985 VKORC1Q9BQB6 163 aa13.91□□□□□ -0.18
IFT20-208ENST00000578985 ARMC7Q9H6L4 198 aa13.91□□□□□ -0.18
IFT20-208ENST00000578985 RLIMQ9NVW2 624 aa13.91□□□□□ -0.18
IFT20-208ENST00000578985 CMTM6Q9NX76 183 aa13.91□□□□□ -0.18
IFT20-208ENST00000578985 DNAJB12Q9NXW2 375 aaKnown RBP13.91□□□□□ -0.18
IFT20-208ENST00000578985 MEMO1Q9Y316 297 aa13.91□□□□□ -0.18
IFT20-208ENST00000578985 GPC6Q9Y625 555 aaPredicted RBP13.91□□□□□ -0.18
IFT20-208ENST00000578985 MYO18BQ8IUG5 2567 aa13.9□□□□□ -0.18
IFT20-208ENST00000578985 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.9□□□□□ -0.18
IFT20-208ENST00000578985 CDHR4A6H8M9 788 aa13.9□□□□□ -0.18
IFT20-208ENST00000578985 CCT8L1PA6NM43 557 aa13.9□□□□□ -0.18
IFT20-208ENST00000578985 AHRRA9YTQ3 701 aa13.9□□□□□ -0.18
IFT20-208ENST00000578985 H3BML4 177 aa13.9□□□□□ -0.18
IFT20-208ENST00000578985 SERPINB7O75635 380 aa13.9□□□□□ -0.18
IFT20-208ENST00000578985 PRKCAP17252 672 aa13.9□□□□□ -0.18
IFT20-208ENST00000578985 PSMA4P25789 261 aaKnown RBP13.9□□□□□ -0.18
IFT20-208ENST00000578985 PTGER4P35408 488 aa13.9□□□□□ -0.18
IFT20-208ENST00000578985 PCBP3P57721 371 aaKnown RBP13.9□□□□□ -0.18
IFT20-208ENST00000578985 PSME3P61289 254 aa13.9□□□□□ -0.18
IFT20-208ENST00000578985 FOXF1Q12946 379 aa13.9□□□□□ -0.18
IFT20-208ENST00000578985 TMEM211Q6ICI0 200 aa13.9□□□□□ -0.18
IFT20-208ENST00000578985 C8orf82Q6P1X6 216 aaPredicted RBP13.9□□□□□ -0.18
IFT20-208ENST00000578985 MTFR2Q6P444 385 aa13.9□□□□□ -0.18
IFT20-208ENST00000578985 ERICH5Q6P6B1 374 aa13.9□□□□□ -0.18
IFT20-208ENST00000578985 SLC15A3Q8IY34 581 aa13.9□□□□□ -0.18
IFT20-208ENST00000578985 ULK2Q8IYT8 1036 aa13.9□□□□□ -0.18
IFT20-208ENST00000578985 FITM2Q8N6M3 262 aa13.9□□□□□ -0.18
IFT20-208ENST00000578985 FBXO27Q8NI29 283 aa13.9□□□□□ -0.18
IFT20-208ENST00000578985 TMEM234Q8WY98 164 aa13.9□□□□□ -0.18
IFT20-208ENST00000578985 ST8SIA1Q92185 356 aa13.9□□□□□ -0.18
IFT20-208ENST00000578985 ZNF524Q96C55 264 aa13.9□□□□□ -0.18
IFT20-208ENST00000578985 MRGPRX4Q96LA9 322 aa13.9□□□□□ -0.18
IFT20-208ENST00000578985 DMRTA2Q96SC8 542 aa13.9□□□□□ -0.18
IFT20-208ENST00000578985 ACER3Q9NUN7 267 aa13.9□□□□□ -0.18
IFT20-208ENST00000578985 STOML1Q9UBI4 398 aa13.9□□□□□ -0.18
IFT20-208ENST00000578985 CHST2Q9Y4C5 530 aa13.9□□□□□ -0.18
IFT20-208ENST00000578985 AP4B1Q9Y6B7 739 aa13.9□□□□□ -0.18
IFT20-208ENST00000578985 COL12A1Q99715 3063 aa13.9□□□□□ -0.18
IFT20-208ENST00000578985 PRORSD1PA6NEY8 169 aa13.89□□□□□ -0.19
IFT20-208ENST00000578985 CFAP73A6NFT4 308 aa13.89□□□□□ -0.19
IFT20-208ENST00000578985 FAM220BPB1ANY3 271 aa13.89□□□□□ -0.19
IFT20-208ENST00000578985 H0Y3Z8 333 aa13.89□□□□□ -0.19
IFT20-208ENST00000578985 M0QX08 132 aa13.89□□□□□ -0.19
IFT20-208ENST00000578985 AP3D1O14617 1153 aa13.89□□□□□ -0.19
IFT20-208ENST00000578985 GCM2O75603 506 aaPredicted RBP13.89□□□□□ -0.19
IFT20-208ENST00000578985 NTN1O95631 604 aa13.89□□□□□ -0.19
IFT20-208ENST00000578985 ZNF708P17019 499 aa13.89□□□□□ -0.19
IFT20-208ENST00000578985 ADH6P28332 368 aa13.89□□□□□ -0.19
IFT20-208ENST00000578985 PRKAR1BP31321 381 aa13.89□□□□□ -0.19
IFT20-208ENST00000578985 SLC7A2P52569 658 aa13.89□□□□□ -0.19
IFT20-208ENST00000578985 CLDN18P56856 261 aa13.89□□□□□ -0.19
IFT20-208ENST00000578985 SESN3P58005 492 aa13.89□□□□□ -0.19
IFT20-208ENST00000578985 SF3B4Q15427 424 aaKnown RBP eCLIP13.89□□□□□ -0.19
IFT20-208ENST00000578985 SLC25A53Q5H9E4 307 aa13.89□□□□□ -0.19
IFT20-208ENST00000578985 INTS11Q5TA45 600 aaKnown RBP13.89□□□□□ -0.19
IFT20-208ENST00000578985 RTL6Q6ICC9 239 aa13.89□□□□□ -0.19
IFT20-208ENST00000578985 DHRS4L2Q6PKH6 230 aa13.89□□□□□ -0.19
IFT20-208ENST00000578985 PATL1Q86TB9 770 aaKnown RBP13.89□□□□□ -0.19
IFT20-208ENST00000578985 ARMC8Q8IUR7 673 aa13.89□□□□□ -0.19
IFT20-208ENST00000578985 GRAMD2AQ8IUY3 354 aa13.89□□□□□ -0.19
IFT20-208ENST00000578985 UBQLNLQ8IYU4 475 aa13.89□□□□□ -0.19
IFT20-208ENST00000578985 MEIOBQ8N635 442 aa13.89□□□□□ -0.19
IFT20-208ENST00000578985 ZNF563Q8TA94 476 aa13.89□□□□□ -0.19
IFT20-208ENST00000578985 PHF10Q8WUB8 498 aaKnown RBP13.89□□□□□ -0.19
IFT20-208ENST00000578985 SMPDL3BQ92485 455 aa13.89□□□□□ -0.19
IFT20-208ENST00000578985 USP22Q9UPT9 525 aa13.89□□□□□ -0.19
IFT20-208ENST00000578985 FAM215AQ9Y5M1 114 aa13.89□□□□□ -0.19
IFT20-208ENST00000578985 NCOA6Q14686 2063 aaPredicted RBP13.89□□□□□ -0.19
IFT20-208ENST00000578985 SPENQ96T58 3664 aaKnown RBP13.88□□□□□ -0.19
IFT20-208ENST00000578985 CYSRT1A8MQ03 144 aa13.88□□□□□ -0.19
IFT20-208ENST00000578985 ETV2O00321 342 aaPredicted RBP13.88□□□□□ -0.19
IFT20-208ENST00000578985 NME4O00746 187 aa13.88□□□□□ -0.19
IFT20-208ENST00000578985 ADAM11O75078 769 aa13.88□□□□□ -0.19
IFT20-208ENST00000578985 MFN2O95140 757 aa13.88□□□□□ -0.19
IFT20-208ENST00000578985 GKN3PP0CG01 181 aa13.88□□□□□ -0.19
IFT20-208ENST00000578985 GP1BBP13224 206 aa13.88□□□□□ -0.19
IFT20-208ENST00000578985 UQCRBP14927 111 aa13.88□□□□□ -0.19
IFT20-208ENST00000578985 IDH2P48735 452 aaKnown RBP13.88□□□□□ -0.19
IFT20-208ENST00000578985 CLDN20P56880 219 aa13.88□□□□□ -0.19
IFT20-208ENST00000578985 RAC1P63000 192 aa13.88□□□□□ -0.19
IFT20-208ENST00000578985 LIPEQ05469 1076 aa13.88□□□□□ -0.19
IFT20-208ENST00000578985 MERTKQ12866 999 aa13.88□□□□□ -0.19
IFT20-208ENST00000578985 EPS8Q12929 822 aa13.88□□□□□ -0.19
IFT20-208ENST00000578985 ACSF3Q4G176 576 aaPredicted RBP13.88□□□□□ -0.19
IFT20-208ENST00000578985 RPTNQ6XPR3 784 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms