RNA–Protein interactions for RNA: ENST00000577830.5

CUEDC1-206, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUEDC1, Length 3,621 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-206ENST00000577830 OTUB2Q96DC9 234 aa13.68□□□□□ -0.22
CUEDC1-206ENST00000577830 MSANTD3Q96H12 275 aa13.68□□□□□ -0.22
CUEDC1-206ENST00000577830 LINC00615Q96LM1 132 aaPredicted RBP13.68□□□□□ -0.22
CUEDC1-206ENST00000577830 ERMAPQ96PL5 475 aaPredicted RBP13.68□□□□□ -0.22
CUEDC1-206ENST00000577830 TNFRSF13CQ96RJ3 184 aa13.68□□□□□ -0.22
CUEDC1-206ENST00000577830 OR10A4Q9H209 315 aa13.68□□□□□ -0.22
CUEDC1-206ENST00000577830 ARID1AO14497 2285 aa13.67□□□□□ -0.22
CUEDC1-206ENST00000577830 A8MUA0 341 aa13.67□□□□□ -0.22
CUEDC1-206ENST00000577830 ACTR1BP42025 376 aa13.67□□□□□ -0.22
CUEDC1-206ENST00000577830 SOX2P48431 317 aa13.67□□□□□ -0.22
CUEDC1-206ENST00000577830 CCR4P51679 360 aa13.67□□□□□ -0.22
CUEDC1-206ENST00000577830 ACTR1AP61163 376 aa13.67□□□□□ -0.22
CUEDC1-206ENST00000577830 ARHGAP19Q14CB8 494 aa13.67□□□□□ -0.22
CUEDC1-206ENST00000577830 TMIEQ8NEW7 156 aa13.67□□□□□ -0.22
CUEDC1-206ENST00000577830 CEP76Q8TAP6 659 aa13.67□□□□□ -0.22
CUEDC1-206ENST00000577830 BPIFA2Q96DR5 249 aa13.67□□□□□ -0.22
CUEDC1-206ENST00000577830 DPAGT1Q9H3H5 408 aa13.67□□□□□ -0.22
CUEDC1-206ENST00000577830 SRMSQ9H3Y6 488 aa13.67□□□□□ -0.22
CUEDC1-206ENST00000577830 AUNIPQ9H7T9 357 aa13.67□□□□□ -0.22
CUEDC1-206ENST00000577830 OR6C2Q9NZP2 312 aa13.67□□□□□ -0.22
CUEDC1-206ENST00000577830 IMPA2O14732 288 aa13.67□□□□□ -0.22
CUEDC1-206ENST00000577830 SLC19A2O60779 497 aa13.67□□□□□ -0.22
CUEDC1-206ENST00000577830 ZGLP1P0C6A0 271 aa13.67□□□□□ -0.22
CUEDC1-206ENST00000577830 FPR3P25089 353 aa13.67□□□□□ -0.22
CUEDC1-206ENST00000577830 DPTQ07507 201 aa13.67□□□□□ -0.22
CUEDC1-206ENST00000577830 ZNF542PQ5EBM4 170 aa13.67□□□□□ -0.22
CUEDC1-206ENST00000577830 POMZP3Q6PJE2 187 aa13.67□□□□□ -0.22
CUEDC1-206ENST00000577830 FRRS1Q6ZNA5 592 aa13.67□□□□□ -0.22
CUEDC1-206ENST00000577830 SSX6Q7RTT6 188 aa13.67□□□□□ -0.22
CUEDC1-206ENST00000577830 CCDC28AQ8IWP9 274 aa13.67□□□□□ -0.22
CUEDC1-206ENST00000577830 POGLUT1Q8NBL1 392 aa13.67□□□□□ -0.22
CUEDC1-206ENST00000577830 OR4K14Q8NGD5 310 aa13.67□□□□□ -0.22
CUEDC1-206ENST00000577830 SPPL3Q8TCT6 385 aa13.67□□□□□ -0.22
CUEDC1-206ENST00000577830 SMPDL3BQ92485 455 aa13.67□□□□□ -0.22
CUEDC1-206ENST00000577830 MS4A3Q96HJ5 214 aa13.67□□□□□ -0.22
CUEDC1-206ENST00000577830 HS6ST2Q96MM7 605 aa13.67□□□□□ -0.22
CUEDC1-206ENST00000577830 NKX3-1Q99801 234 aaPredicted RBP13.67□□□□□ -0.22
CUEDC1-206ENST00000577830 MED18Q9BUE0 208 aa13.67□□□□□ -0.22
CUEDC1-206ENST00000577830 TMEM106CQ9BVX2 250 aa13.67□□□□□ -0.22
CUEDC1-206ENST00000577830 BCL2L10Q9HD36 194 aa13.67□□□□□ -0.22
CUEDC1-206ENST00000577830 KRCC1Q9NPI7 259 aaPredicted RBP13.67□□□□□ -0.22
CUEDC1-206ENST00000577830 EVA1BQ9NVM1 165 aa13.67□□□□□ -0.22
CUEDC1-206ENST00000577830 KLHL21Q9UJP4 597 aa13.67□□□□□ -0.22
CUEDC1-206ENST00000577830 GTF2A1LQ9UNN4 478 aa13.67□□□□□ -0.22
CUEDC1-206ENST00000577830 LIPT1Q9Y234 373 aa13.67□□□□□ -0.22
CUEDC1-206ENST00000577830 RASGRP1O95267 797 aa13.66□□□□□ -0.22
CUEDC1-206ENST00000577830 EML2O95834 649 aa13.66□□□□□ -0.22
CUEDC1-206ENST00000577830 EN2P19622 333 aaPredicted RBP13.66□□□□□ -0.22
CUEDC1-206ENST00000577830 BMP8BP34820 402 aa13.66□□□□□ -0.22
CUEDC1-206ENST00000577830 CRYZQ08257 329 aaKnown RBP13.66□□□□□ -0.22
CUEDC1-206ENST00000577830 CST6Q15828 149 aa13.66□□□□□ -0.22
CUEDC1-206ENST00000577830 DEFB110Q30KQ9 67 aa13.66□□□□□ -0.22
CUEDC1-206ENST00000577830 NDUFAF6Q330K2 333 aa13.66□□□□□ -0.22
CUEDC1-206ENST00000577830 BMP8AQ7Z5Y6 402 aa13.66□□□□□ -0.22
CUEDC1-206ENST00000577830 CDH24Q86UP0 819 aa13.66□□□□□ -0.22
CUEDC1-206ENST00000577830 ARIH2OSQ8N7S6 290 aa13.66□□□□□ -0.22
CUEDC1-206ENST00000577830 POLMQ9NP87 494 aaPredicted RBP13.66□□□□□ -0.22
CUEDC1-206ENST00000577830 PRUNE2Q8WUY3 3088 aa13.66□□□□□ -0.22
CUEDC1-206ENST00000577830 EYSQ5T1H1 3165 aa13.66□□□□□ -0.22
CUEDC1-206ENST00000577830 ACOD1A6NK06 481 aa13.66□□□□□ -0.22
CUEDC1-206ENST00000577830 SLC43A1O75387 559 aa13.66□□□□□ -0.22
CUEDC1-206ENST00000577830 LINC00271P0C7V0 271 aa13.66□□□□□ -0.22
CUEDC1-206ENST00000577830 CPMP14384 443 aa13.66□□□□□ -0.22
CUEDC1-206ENST00000577830 RAB3BP20337 219 aa13.66□□□□□ -0.22
CUEDC1-206ENST00000577830 DDX6P26196 483 aaKnown RBP eCLIP13.66□□□□□ -0.22
CUEDC1-206ENST00000577830 HSD17B2P37059 387 aa13.66□□□□□ -0.22
CUEDC1-206ENST00000577830 FOXK2Q01167 660 aa13.66□□□□□ -0.22
CUEDC1-206ENST00000577830 OC90Q02509 493 aaPredicted RBP13.66□□□□□ -0.22
CUEDC1-206ENST00000577830 RGS1Q08116 209 aa13.66□□□□□ -0.22
CUEDC1-206ENST00000577830 VASNQ6EMK4 673 aa13.66□□□□□ -0.22
CUEDC1-206ENST00000577830 LAMTOR1Q6IAA8 161 aa13.66□□□□□ -0.22
CUEDC1-206ENST00000577830 MFSD12Q6NUT3 480 aa13.66□□□□□ -0.22
CUEDC1-206ENST00000577830 PRR23CQ6ZRP0 262 aa13.66□□□□□ -0.22
CUEDC1-206ENST00000577830 PARGQ86W56 976 aa13.66□□□□□ -0.22
CUEDC1-206ENST00000577830 PLCZ1Q86YW0 608 aa13.66□□□□□ -0.22
CUEDC1-206ENST00000577830 YAF2Q8IY57 180 aa13.66□□□□□ -0.22
CUEDC1-206ENST00000577830 FAM109AQ8N4B1 249 aa13.66□□□□□ -0.22
CUEDC1-206ENST00000577830 PEX11GQ96HA9 241 aa13.66□□□□□ -0.22
CUEDC1-206ENST00000577830 OR14A2Q96R54 314 aa13.66□□□□□ -0.22
CUEDC1-206ENST00000577830 TEAD3Q99594 435 aa13.66□□□□□ -0.22
CUEDC1-206ENST00000577830 C1QTNF6Q9BXI9 259 aa13.66□□□□□ -0.22
CUEDC1-206ENST00000577830 OR51J1Q9H342 316 aa13.66□□□□□ -0.22
CUEDC1-206ENST00000577830 IL20Q9NYY1 176 aa13.66□□□□□ -0.22
CUEDC1-206ENST00000577830 CALML5Q9NZT1 146 aa13.66□□□□□ -0.22
CUEDC1-206ENST00000577830 ZNF346Q9UL40 294 aaKnown RBP13.66□□□□□ -0.22
CUEDC1-206ENST00000577830 ACSL5Q9ULC5 683 aa13.66□□□□□ -0.22
CUEDC1-206ENST00000577830 GXYLT2A0PJZ3 443 aa13.66□□□□□ -0.22
CUEDC1-206ENST00000577830 IDSB3KWA1 339 aa13.66□□□□□ -0.22
CUEDC1-206ENST00000577830 TPPPO94811 219 aa13.66□□□□□ -0.22
CUEDC1-206ENST00000577830 SLC35G6P0C7Q6 338 aa13.66□□□□□ -0.22
CUEDC1-206ENST00000577830 TRAPPC2P0DI81 140 aa13.66□□□□□ -0.22
CUEDC1-206ENST00000577830 TRAPPC2BP0DI82 140 aa13.66□□□□□ -0.22
CUEDC1-206ENST00000577830 EDNRAP25101 427 aa13.66□□□□□ -0.22
CUEDC1-206ENST00000577830 SNTB2Q13425 540 aaKnown RBP13.66□□□□□ -0.22
CUEDC1-206ENST00000577830 NIPAL3Q6P499 406 aa13.66□□□□□ -0.22
CUEDC1-206ENST00000577830 TCTE3Q8IZS6 198 aa13.66□□□□□ -0.22
CUEDC1-206ENST00000577830 OR5M3Q8NGP4 307 aa13.66□□□□□ -0.22
CUEDC1-206ENST00000577830 FAM83CQ9BQN1 747 aa13.66□□□□□ -0.22
CUEDC1-206ENST00000577830 CLEC4MQ9H2X3 399 aaPredicted RBP13.66□□□□□ -0.22
CUEDC1-206ENST00000577830 KAT7O95251 611 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms