RNA–Protein interactions for RNA: ENST00000577636.5

SS18-207, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-207ENST00000577636 RFX3P48380 749 aa9.32□□□□□ -0.92
SS18-207ENST00000577636 GTF2A1P52655 376 aaPredicted RBP9.32□□□□□ -0.92
SS18-207ENST00000577636 HMGA2P52926 109 aa9.32□□□□□ -0.92
SS18-207ENST00000577636 TAS2R41P59536 307 aa9.32□□□□□ -0.92
SS18-207ENST00000577636 DCAF7P61962 342 aa9.32□□□□□ -0.92
SS18-207ENST00000577636 FUT7Q11130 342 aa9.32□□□□□ -0.92
SS18-207ENST00000577636 INAQ16352 499 aa9.32□□□□□ -0.92
SS18-207ENST00000577636 DECR1Q16698 335 aa9.32□□□□□ -0.92
SS18-207ENST00000577636 EXOC3L2Q2M3D2 409 aa9.32□□□□□ -0.92
SS18-207ENST00000577636 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.32□□□□□ -0.92
SS18-207ENST00000577636 ABHD17BQ5VST6 288 aa9.32□□□□□ -0.92
SS18-207ENST00000577636 KDM4DQ6B0I6 523 aa9.32□□□□□ -0.92
SS18-207ENST00000577636 TYW3Q6IPR3 259 aaKnown RBP9.32□□□□□ -0.92
SS18-207ENST00000577636 FRRS1Q6ZNA5 592 aa9.32□□□□□ -0.92
SS18-207ENST00000577636 RRM2BQ7LG56 351 aa9.32□□□□□ -0.92
SS18-207ENST00000577636 TMEM179BQ7Z7N9 219 aa9.32□□□□□ -0.92
SS18-207ENST00000577636 OFCC1Q8IZS5 231 aa9.32□□□□□ -0.92
SS18-207ENST00000577636 HS3ST5Q8IZT8 346 aa9.32□□□□□ -0.92
SS18-207ENST00000577636 ZNF786Q8N393 782 aa9.32□□□□□ -0.92
SS18-207ENST00000577636 GPR32P1Q8NGA4 272 aa9.32□□□□□ -0.92
SS18-207ENST00000577636 DOK4Q8TEW6 326 aa9.32□□□□□ -0.92
SS18-207ENST00000577636 PIK3R3Q92569 461 aa9.32□□□□□ -0.92
SS18-207ENST00000577636 SENP5Q96HI0 755 aaPredicted RBP9.32□□□□□ -0.92
SS18-207ENST00000577636 FBXL20Q96IG2 436 aa9.32□□□□□ -0.92
SS18-207ENST00000577636 PRRC1Q96M27 445 aa9.32□□□□□ -0.92
SS18-207ENST00000577636 YTHDF1Q9BYJ9 559 aaKnown RBP9.32□□□□□ -0.92
SS18-207ENST00000577636 POLR2J2Q9GZM3 115 aaKnown RBP9.32□□□□□ -0.92
SS18-207ENST00000577636 TGIF2Q9GZN2 237 aa9.32□□□□□ -0.92
SS18-207ENST00000577636 ZNF350Q9GZX5 532 aa9.32□□□□□ -0.92
SS18-207ENST00000577636 HOXD1Q9GZZ0 328 aa9.32□□□□□ -0.92
SS18-207ENST00000577636 POLR2J3Q9H1A7 115 aaKnown RBP9.32□□□□□ -0.92
SS18-207ENST00000577636 TSPAN10Q9H1Z9 355 aaPredicted RBP9.32□□□□□ -0.92
SS18-207ENST00000577636 NMNAT1Q9HAN9 279 aaPredicted RBP9.32□□□□□ -0.92
SS18-207ENST00000577636 PAPOLBQ9NRJ5 636 aaKnown RBP9.32□□□□□ -0.92
SS18-207ENST00000577636 FAM118AQ9NWS6 357 aa9.32□□□□□ -0.92
SS18-207ENST00000577636 VNN3Q9NY84 501 aa9.32□□□□□ -0.92
SS18-207ENST00000577636 C19orf25Q9UFG5 118 aaPredicted RBP9.32□□□□□ -0.92
SS18-207ENST00000577636 MAGED1Q9Y5V3 778 aaPredicted RBP9.32□□□□□ -0.92
SS18-207ENST00000577636 ADGRG4Q8IZF6 3080 aa9.32□□□□□ -0.92
SS18-207ENST00000577636 MED13LQ71F56 2210 aa9.31□□□□□ -0.92
SS18-207ENST00000577636 PDZD2O15018 2839 aa9.31□□□□□ -0.92
SS18-207ENST00000577636 IGKV3D-11A0A0A0MRZ8 115 aa9.31□□□□□ -0.92
SS18-207ENST00000577636 LOC100130705A0A1B0GUX0 176 aa9.31□□□□□ -0.92
SS18-207ENST00000577636 TCRBV16S1A1N1A0A5B0 115 aa9.31□□□□□ -0.92
SS18-207ENST00000577636 OR6C76A6NM76 312 aa9.31□□□□□ -0.92
SS18-207ENST00000577636 A8MUA0 341 aa9.31□□□□□ -0.92
SS18-207ENST00000577636 IDSB3KWA1 339 aa9.31□□□□□ -0.92
SS18-207ENST00000577636 TGFBR3LH3BV60 316 aa9.31□□□□□ -0.92
SS18-207ENST00000577636 M0R3H8 397 aa9.31□□□□□ -0.92
SS18-207ENST00000577636 BCKDKO14874 412 aa9.31□□□□□ -0.92
SS18-207ENST00000577636 KIAA0513O60268 411 aa9.31□□□□□ -0.92
SS18-207ENST00000577636 FCMRO60667 390 aa9.31□□□□□ -0.92
SS18-207ENST00000577636 SEC24DO94855 1032 aaPredicted RBP9.31□□□□□ -0.92
SS18-207ENST00000577636 CYC1P08574 325 aa9.31□□□□□ -0.92
SS18-207ENST00000577636 NID1P14543 1247 aa9.31□□□□□ -0.92
SS18-207ENST00000577636 HPGDP15428 266 aa9.31□□□□□ -0.92
SS18-207ENST00000577636 S1PR1P21453 382 aa9.31□□□□□ -0.92
SS18-207ENST00000577636 SSTR4P31391 388 aa9.31□□□□□ -0.92
SS18-207ENST00000577636 EMDP50402 254 aa9.31□□□□□ -0.92
SS18-207ENST00000577636 UGT2B15P54855 530 aa9.31□□□□□ -0.92
SS18-207ENST00000577636 ADARB1P78563 741 aaKnown RBP9.31□□□□□ -0.92
SS18-207ENST00000577636 RHAGQ02094 409 aa9.31□□□□□ -0.92
SS18-207ENST00000577636 ST3GAL3Q11203 375 aa9.31□□□□□ -0.92
SS18-207ENST00000577636 KEAP1Q14145 624 aa9.31□□□□□ -0.92
SS18-207ENST00000577636 LAPTM4AQ15012 233 aa9.31□□□□□ -0.92
SS18-207ENST00000577636 TESK1Q15569 626 aa9.31□□□□□ -0.92
SS18-207ENST00000577636 IQCCQ4KMZ1 466 aa9.31□□□□□ -0.92
SS18-207ENST00000577636 EXOSC6Q5RKV6 272 aaKnown RBP9.31□□□□□ -0.92
SS18-207ENST00000577636 CCNJQ5T5M9 372 aa9.31□□□□□ -0.92
SS18-207ENST00000577636 FAHD1Q6P587 224 aa9.31□□□□□ -0.92
SS18-207ENST00000577636 FIGNL1Q6PIW4 674 aa9.31□□□□□ -0.92
SS18-207ENST00000577636 DGAT2L6Q6ZPD8 337 aa9.31□□□□□ -0.92
SS18-207ENST00000577636 PLEKHM3Q6ZWE6 761 aa9.31□□□□□ -0.92
SS18-207ENST00000577636 SLC29A4Q7RTT9 530 aa9.31□□□□□ -0.92
SS18-207ENST00000577636 THAP5Q7Z6K1 395 aa9.31□□□□□ -0.92
SS18-207ENST00000577636 GALNT5Q7Z7M9 940 aa9.31□□□□□ -0.92
SS18-207ENST00000577636 VRK2Q86Y07 508 aa9.31□□□□□ -0.92
SS18-207ENST00000577636 ZNF527Q8NB42 609 aa9.31□□□□□ -0.92
SS18-207ENST00000577636 MORN4Q8NDC4 146 aa9.31□□□□□ -0.92
SS18-207ENST00000577636 TOR1AIP2Q8NFQ8 470 aa9.31□□□□□ -0.92
SS18-207ENST00000577636 OIT3Q8WWZ8 545 aa9.31□□□□□ -0.92
SS18-207ENST00000577636 SLC38A4Q969I6 547 aa9.31□□□□□ -0.92
SS18-207ENST00000577636 VSTM2LQ96N03 204 aa9.31□□□□□ -0.92
SS18-207ENST00000577636 ARHGDIGQ99819 225 aa9.31□□□□□ -0.92
SS18-207ENST00000577636 PSD2Q9BQI7 771 aa9.31□□□□□ -0.92
SS18-207ENST00000577636 OR8D2Q9GZM6 311 aa9.31□□□□□ -0.92
SS18-207ENST00000577636 SAP130Q9H0E3 1048 aa9.31□□□□□ -0.92
SS18-207ENST00000577636 QRSL1Q9H0R6 528 aaKnown RBP9.31□□□□□ -0.92
SS18-207ENST00000577636 ANKRD19PQ9H560 264 aa9.31□□□□□ -0.92
SS18-207ENST00000577636 ZNF696Q9H7X3 374 aa9.31□□□□□ -0.92
SS18-207ENST00000577636 KLHL1Q9NR64 748 aa9.31□□□□□ -0.92
SS18-207ENST00000577636 ACER3Q9NUN7 267 aa9.31□□□□□ -0.92
SS18-207ENST00000577636 UBAP1Q9NZ09 502 aa9.31□□□□□ -0.92
SS18-207ENST00000577636 BLOC1S6Q9UL45 172 aa9.31□□□□□ -0.92
SS18-207ENST00000577636 MGAT4BQ9UQ53 548 aa9.31□□□□□ -0.92
SS18-207ENST00000577636 GMPPBQ9Y5P6 360 aa9.31□□□□□ -0.92
SS18-207ENST00000577636 SNRNP200O75643 2136 aaKnown RBP9.31□□□□□ -0.92
SS18-207ENST00000577636 IGHV1-45A0A0A0MS14 117 aa9.3□□□□□ -0.92
SS18-207ENST00000577636 A0A1W2PRQ8 180 aa9.3□□□□□ -0.92
SS18-207ENST00000577636 OR5H15A6NDH6 313 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms