RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 GGTLC2Q14390 218 aa11.77□□□□□ -0.53
COPS3-214ENST00000577246 TRADDQ15628 312 aa11.77□□□□□ -0.53
COPS3-214ENST00000577246 DUSP5Q16690 384 aa11.77□□□□□ -0.53
COPS3-214ENST00000577246 C1QTNF12Q5T7M4 302 aa11.77□□□□□ -0.53
COPS3-214ENST00000577246 FAM219BQ5XKK7 198 aa11.77□□□□□ -0.53
COPS3-214ENST00000577246 FBXW9Q5XUX1 488 aa11.77□□□□□ -0.53
COPS3-214ENST00000577246 OR7E24Q6IFN5 339 aa11.77□□□□□ -0.53
COPS3-214ENST00000577246 TRIM46Q7Z4K8 759 aa11.77□□□□□ -0.53
COPS3-214ENST00000577246 ZAR1Q86SH2 424 aa11.77□□□□□ -0.53
COPS3-214ENST00000577246 ZNF433Q8N7K0 673 aaPredicted RBP11.77□□□□□ -0.53
COPS3-214ENST00000577246 TOR1AIP2Q8NFQ8 470 aa11.77□□□□□ -0.53
COPS3-214ENST00000577246 OR52N5Q8NH56 324 aa11.77□□□□□ -0.53
COPS3-214ENST00000577246 FBXO30Q8TB52 745 aa11.77□□□□□ -0.53
COPS3-214ENST00000577246 HTRA1Q92743 480 aa11.77□□□□□ -0.53
COPS3-214ENST00000577246 PPCDCQ96CD2 204 aa11.77□□□□□ -0.53
COPS3-214ENST00000577246 CHMP6Q96FZ7 201 aa11.77□□□□□ -0.53
COPS3-214ENST00000577246 KCNA7Q96RP8 456 aa11.77□□□□□ -0.53
COPS3-214ENST00000577246 STACQ99469 402 aa11.77□□□□□ -0.53
COPS3-214ENST00000577246 TRMOQ9BU70 441 aa11.77□□□□□ -0.53
COPS3-214ENST00000577246 MYOZ1Q9NP98 299 aaPredicted RBP11.77□□□□□ -0.53
COPS3-214ENST00000577246 MID1IP1Q9NPA3 183 aa11.77□□□□□ -0.53
COPS3-214ENST00000577246 DUSP22Q9NRW4 184 aa11.77□□□□□ -0.53
COPS3-214ENST00000577246 ACSS1Q9NUB1 689 aaPredicted RBP11.77□□□□□ -0.53
COPS3-214ENST00000577246 ICAM5Q9UMF0 924 aa11.77□□□□□ -0.53
COPS3-214ENST00000577246 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.76□□□□□ -0.53
COPS3-214ENST00000577246 POC1B-GALNT4F8VUJ3 575 aa11.76□□□□□ -0.53
COPS3-214ENST00000577246 M0R1B8 84 aa11.76□□□□□ -0.53
COPS3-214ENST00000577246 EFNA2O43921 213 aa11.76□□□□□ -0.53
COPS3-214ENST00000577246 RAD51DO75771 328 aa11.76□□□□□ -0.53
COPS3-214ENST00000577246 PRKCAP17252 672 aa11.76□□□□□ -0.53
COPS3-214ENST00000577246 APOBEC3AP31941 199 aaPredicted RBP11.76□□□□□ -0.53
COPS3-214ENST00000577246 CSNK2A1P68400 391 aaPredicted RBP11.76□□□□□ -0.53
COPS3-214ENST00000577246 CHRNEQ04844 493 aa11.76□□□□□ -0.53
COPS3-214ENST00000577246 IL17RELQ6ZVW7 336 aa11.76□□□□□ -0.53
COPS3-214ENST00000577246 ZNF540Q8NDQ6 660 aa11.76□□□□□ -0.53
COPS3-214ENST00000577246 APH1AQ96BI3 265 aa11.76□□□□□ -0.53
COPS3-214ENST00000577246 MSI2Q96DH6 328 aaKnown RBP11.76□□□□□ -0.53
COPS3-214ENST00000577246 CCDC126Q96EE4 140 aa11.76□□□□□ -0.53
COPS3-214ENST00000577246 GIMAP5Q96F15 307 aa11.76□□□□□ -0.53
COPS3-214ENST00000577246 OR5B2Q96R09 309 aa11.76□□□□□ -0.53
COPS3-214ENST00000577246 SERINC1Q9NRX5 453 aa11.76□□□□□ -0.53
COPS3-214ENST00000577246 ZDHHC18Q9NUE0 388 aa11.76□□□□□ -0.53
COPS3-214ENST00000577246 ASB6Q9NWX5 421 aa11.76□□□□□ -0.53
COPS3-214ENST00000577246 GIN1Q9NXP7 522 aa11.76□□□□□ -0.53
COPS3-214ENST00000577246 TAS2R16Q9NYV7 291 aa11.76□□□□□ -0.53
COPS3-214ENST00000577246 ING1Q9UK53 422 aaPredicted RBP11.76□□□□□ -0.53
COPS3-214ENST00000577246 CARD8Q9Y2G2 431 aa11.76□□□□□ -0.53
COPS3-214ENST00000577246 SLC25A15Q9Y619 301 aa11.76□□□□□ -0.53
COPS3-214ENST00000577246 SMAD9O15198 467 aaKnown RBP11.75□□□□□ -0.53
COPS3-214ENST00000577246 TBX19O60806 448 aa11.75□□□□□ -0.53
COPS3-214ENST00000577246 SEC22BO75396 215 aa11.75□□□□□ -0.53
COPS3-214ENST00000577246 GSTA1P08263 222 aa11.75□□□□□ -0.53
COPS3-214ENST00000577246 KRT16P08779 473 aa11.75□□□□□ -0.53
COPS3-214ENST00000577246 NR4A2P43354 598 aa11.75□□□□□ -0.53
COPS3-214ENST00000577246 SRSF2Q01130 221 aaKnown RBP11.75□□□□□ -0.53
COPS3-214ENST00000577246 SPOCK1Q08629 439 aa11.75□□□□□ -0.53
COPS3-214ENST00000577246 CBFBQ13951 182 aa11.75□□□□□ -0.53
COPS3-214ENST00000577246 PDK3Q15120 406 aa11.75□□□□□ -0.53
COPS3-214ENST00000577246 KLHL26Q53HC5 615 aa11.75□□□□□ -0.53
COPS3-214ENST00000577246 SLC25A53Q5H9E4 307 aa11.75□□□□□ -0.53
COPS3-214ENST00000577246 CCNJQ5T5M9 372 aa11.75□□□□□ -0.53
COPS3-214ENST00000577246 CBLN3Q6UW01 205 aa11.75□□□□□ -0.53
COPS3-214ENST00000577246 LRIG3Q6UXM1 1119 aa11.75□□□□□ -0.53
COPS3-214ENST00000577246 CNPY4Q8N129 248 aa11.75□□□□□ -0.53
COPS3-214ENST00000577246 TMCO5AQ8N6Q1 288 aa11.75□□□□□ -0.53
COPS3-214ENST00000577246 OR5W2Q8NH69 310 aa11.75□□□□□ -0.53
COPS3-214ENST00000577246 GPR119Q8TDV5 335 aa11.75□□□□□ -0.53
COPS3-214ENST00000577246 DCAKDQ8WVC6 231 aa11.75□□□□□ -0.53
COPS3-214ENST00000577246 CIDECQ96AQ7 238 aaPredicted RBP11.75□□□□□ -0.53
COPS3-214ENST00000577246 ZHX1-C8orf76Q96EF9 292 aa11.75□□□□□ -0.53
COPS3-214ENST00000577246 ZNF300Q96RE9 604 aaPredicted RBP11.75□□□□□ -0.53
COPS3-214ENST00000577246 CCT7Q99832 543 aa11.75□□□□□ -0.53
COPS3-214ENST00000577246 KLHDC3Q9BQ90 382 aa11.75□□□□□ -0.53
COPS3-214ENST00000577246 KCNF1Q9H3M0 494 aa11.75□□□□□ -0.53
COPS3-214ENST00000577246 CDC42EP4Q9H3Q1 356 aaKnown RBP11.75□□□□□ -0.53
COPS3-214ENST00000577246 PIGUQ9H490 435 aa11.75□□□□□ -0.53
COPS3-214ENST00000577246 REEP4Q9H6H4 257 aa11.75□□□□□ -0.53
COPS3-214ENST00000577246 EML4Q9HC35 981 aaKnown RBP11.75□□□□□ -0.53
COPS3-214ENST00000577246 TMEM216Q9P0N5 145 aa11.75□□□□□ -0.53
COPS3-214ENST00000577246 SH3BP4Q9P0V3 963 aa11.75□□□□□ -0.53
COPS3-214ENST00000577246 NOSIPQ9Y314 301 aaKnown RBP11.75□□□□□ -0.53
COPS3-214ENST00000577246 ATP23Q9Y6H3 246 aa11.75□□□□□ -0.53
COPS3-214ENST00000577246 IGKV3D-15A0A087WSY6 115 aa11.74□□□□□ -0.53
COPS3-214ENST00000577246 A0A1W2PNR3 127 aa11.74□□□□□ -0.53
COPS3-214ENST00000577246 LOC390937A0A1W2PQ73 354 aa11.74□□□□□ -0.53
COPS3-214ENST00000577246 SLC35F4A4IF30 521 aa11.74□□□□□ -0.53
COPS3-214ENST00000577246 VWC2LB2RUY7 222 aa11.74□□□□□ -0.53
COPS3-214ENST00000577246 C9JVG2 144 aa11.74□□□□□ -0.53
COPS3-214ENST00000577246 GPR171O14626 319 aa11.74□□□□□ -0.53
COPS3-214ENST00000577246 EIF4E2O60573 245 aaKnown RBP11.74□□□□□ -0.53
COPS3-214ENST00000577246 TGFAP01135 160 aa11.74□□□□□ -0.53
COPS3-214ENST00000577246 FRKP42685 505 aaPredicted RBP11.74□□□□□ -0.53
COPS3-214ENST00000577246 SNRPD2P62316 118 aaKnown RBP11.74□□□□□ -0.53
COPS3-214ENST00000577246 PHC1P78364 1004 aa11.74□□□□□ -0.53
COPS3-214ENST00000577246 IQCCQ4KMZ1 466 aa11.74□□□□□ -0.53
COPS3-214ENST00000577246 UBAP2Q5T6F2 1119 aaKnown RBP11.74□□□□□ -0.53
COPS3-214ENST00000577246 C8orf74Q6P047 294 aa11.74□□□□□ -0.53
COPS3-214ENST00000577246 C12orf54Q6X4T0 127 aa11.74□□□□□ -0.53
COPS3-214ENST00000577246 B3GLCTQ6Y288 498 aa11.74□□□□□ -0.53
COPS3-214ENST00000577246 MEX3DQ86XN8 651 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms