RNA–Protein interactions for RNA: ENST00000574109.5

NDE1-209, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 843 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-209ENST00000574109 TRAP1Q12931 704 aaKnown RBP12.31□□□□□ -0.44
NDE1-209ENST00000574109 TRIM25Q14258 630 aaKnown RBP12.31□□□□□ -0.44
NDE1-209ENST00000574109 NRF1Q16656 503 aa12.31□□□□□ -0.44
NDE1-209ENST00000574109 CYBRD1Q53TN4 286 aa12.31□□□□□ -0.44
NDE1-209ENST00000574109 SLC25A53Q5H9E4 307 aa12.31□□□□□ -0.44
NDE1-209ENST00000574109 NHSL2Q5HYW2 709 aa12.31□□□□□ -0.44
NDE1-209ENST00000574109 RNFT1Q5M7Z0 435 aa12.31□□□□□ -0.44
NDE1-209ENST00000574109 SWT1Q5T5J6 900 aaKnown RBP12.31□□□□□ -0.44
NDE1-209ENST00000574109 GLYATQ6IB77 296 aa12.31□□□□□ -0.44
NDE1-209ENST00000574109 LCN8Q6JVE9 175 aa12.31□□□□□ -0.44
NDE1-209ENST00000574109 CBLN3Q6UW01 205 aa12.31□□□□□ -0.44
NDE1-209ENST00000574109 ENPP6Q6UWR7 440 aa12.31□□□□□ -0.44
NDE1-209ENST00000574109 CBLL1Q75N03 491 aa12.31□□□□□ -0.44
NDE1-209ENST00000574109 TRILQ7L0X0 811 aa12.31□□□□□ -0.44
NDE1-209ENST00000574109 GTPBP8Q8N3Z3 284 aaPredicted RBP12.31□□□□□ -0.44
NDE1-209ENST00000574109 ZNF843Q8N446 348 aa12.31□□□□□ -0.44
NDE1-209ENST00000574109 RNF148Q8N7C7 305 aa12.31□□□□□ -0.44
NDE1-209ENST00000574109 ZNF563Q8TA94 476 aa12.31□□□□□ -0.44
NDE1-209ENST00000574109 GPR119Q8TDV5 335 aa12.31□□□□□ -0.44
NDE1-209ENST00000574109 SLC25A43Q8WUT9 341 aaPredicted RBP12.31□□□□□ -0.44
NDE1-209ENST00000574109 GEMIN6Q8WXD5 167 aaKnown RBP12.31□□□□□ -0.44
NDE1-209ENST00000574109 CNOT9Q92600 299 aaKnown RBP12.31□□□□□ -0.44
NDE1-209ENST00000574109 SARAFQ96BY9 339 aa12.31□□□□□ -0.44
NDE1-209ENST00000574109 SFXN2Q96NB2 322 aa12.31□□□□□ -0.44
NDE1-209ENST00000574109 ARHGDIGQ99819 225 aa12.31□□□□□ -0.44
NDE1-209ENST00000574109 EXO5Q9H790 373 aa12.31□□□□□ -0.44
NDE1-209ENST00000574109 EGFL7Q9UHF1 273 aa12.31□□□□□ -0.44
NDE1-209ENST00000574109 NPIPA1Q9UND3 350 aa12.31□□□□□ -0.44
NDE1-209ENST00000574109 USP22Q9UPT9 525 aa12.31□□□□□ -0.44
NDE1-209ENST00000574109 NTNG1Q9Y2I2 539 aa12.31□□□□□ -0.44
NDE1-209ENST00000574109 SPIN1Q9Y657 262 aaPredicted RBP12.31□□□□□ -0.44
NDE1-209ENST00000574109 SMG1Q96Q15 3661 aaKnown RBP12.31□□□□□ -0.44
NDE1-209ENST00000574109 ARHGAP21Q5T5U3 1957 aa12.3□□□□□ -0.44
NDE1-209ENST00000574109 POLEQ07864 2286 aa12.3□□□□□ -0.44
NDE1-209ENST00000574109 ZNF462Q96JM2 2506 aa12.3□□□□□ -0.44
NDE1-209ENST00000574109 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.3□□□□□ -0.44
NDE1-209ENST00000574109 CLDN24A6NM45 220 aa12.3□□□□□ -0.44
NDE1-209ENST00000574109 GJE1A6NN92 205 aa12.3□□□□□ -0.44
NDE1-209ENST00000574109 BCKDKO14874 412 aa12.3□□□□□ -0.44
NDE1-209ENST00000574109 GCM2O75603 506 aaPredicted RBP12.3□□□□□ -0.44
NDE1-209ENST00000574109 SERPINA1P01009 418 aa12.3□□□□□ -0.44
NDE1-209ENST00000574109 FESP07332 822 aa12.3□□□□□ -0.44
NDE1-209ENST00000574109 GP1BBP13224 206 aa12.3□□□□□ -0.44
NDE1-209ENST00000574109 CRYBA2P53672 197 aa12.3□□□□□ -0.44
NDE1-209ENST00000574109 PLAURQ03405 335 aa12.3□□□□□ -0.44
NDE1-209ENST00000574109 KCNC4Q03721 635 aa12.3□□□□□ -0.44
NDE1-209ENST00000574109 C19orf57Q0VDD7 668 aa12.3□□□□□ -0.44
NDE1-209ENST00000574109 SELENBP1Q13228 472 aa12.3□□□□□ -0.44
NDE1-209ENST00000574109 QPRTQ15274 297 aa12.3□□□□□ -0.44
NDE1-209ENST00000574109 NDUFAF6Q330K2 333 aa12.3□□□□□ -0.44
NDE1-209ENST00000574109 WBP2NLQ6ICG8 309 aa12.3□□□□□ -0.44
NDE1-209ENST00000574109 C3orf33Q6P1S2 294 aa12.3□□□□□ -0.44
NDE1-209ENST00000574109 PRICKLE2Q7Z3G6 844 aa12.3□□□□□ -0.44
NDE1-209ENST00000574109 GRINAQ7Z429 371 aa12.3□□□□□ -0.44
NDE1-209ENST00000574109 HMGN2P46Q86SG4 172 aa12.3□□□□□ -0.44
NDE1-209ENST00000574109 ATCAYQ86WG3 371 aa12.3□□□□□ -0.44
NDE1-209ENST00000574109 DHFR2Q86XF0 187 aa12.3□□□□□ -0.44
NDE1-209ENST00000574109 PM20D2Q8IYS1 436 aa12.3□□□□□ -0.44
NDE1-209ENST00000574109 ULK2Q8IYT8 1036 aa12.3□□□□□ -0.44
NDE1-209ENST00000574109 SMYD1Q8NB12 490 aa12.3□□□□□ -0.44
NDE1-209ENST00000574109 CCDC124Q96CT7 223 aaKnown RBP12.3□□□□□ -0.44
NDE1-209ENST00000574109 LRGUKQ96M69 825 aa12.3□□□□□ -0.44
NDE1-209ENST00000574109 ZNF559Q9BR84 538 aa12.3□□□□□ -0.44
NDE1-209ENST00000574109 TRIM2Q9C040 744 aa12.3□□□□□ -0.44
NDE1-209ENST00000574109 PCDHAC1Q9H158 963 aa12.3□□□□□ -0.44
NDE1-209ENST00000574109 C12orf10Q9HB07 376 aa12.3□□□□□ -0.44
NDE1-209ENST00000574109 ACER3Q9NUN7 267 aa12.3□□□□□ -0.44
NDE1-209ENST00000574109 DCAF13Q9NV06 445 aaKnown RBP12.3□□□□□ -0.44
NDE1-209ENST00000574109 VDAC3Q9Y277 283 aa12.3□□□□□ -0.44
NDE1-209ENST00000574109 HRH3Q9Y5N1 445 aa12.3□□□□□ -0.44
NDE1-209ENST00000574109 PHF3Q92576 2039 aaKnown RBP12.29□□□□□ -0.44
NDE1-209ENST00000574109 AP3D1O14617 1153 aa12.29□□□□□ -0.44
NDE1-209ENST00000574109 GSC2O15499 205 aa12.29□□□□□ -0.44
NDE1-209ENST00000574109 C1QL1O75973 258 aa12.29□□□□□ -0.44
NDE1-209ENST00000574109 PDE5AO76074 875 aa12.29□□□□□ -0.44
NDE1-209ENST00000574109 ZNF682O95780 498 aa12.29□□□□□ -0.44
NDE1-209ENST00000574109 PRKCAP17252 672 aa12.29□□□□□ -0.44
NDE1-209ENST00000574109 MST1P26927 711 aa12.29□□□□□ -0.44
NDE1-209ENST00000574109 IFNA8P32881 189 aa12.29□□□□□ -0.44
NDE1-209ENST00000574109 APOBEC1P41238 236 aaKnown RBP12.29□□□□□ -0.44
NDE1-209ENST00000574109 SLC1A3P43003 542 aa12.29□□□□□ -0.44
NDE1-209ENST00000574109 GFRA1P56159 465 aa12.29□□□□□ -0.44
NDE1-209ENST00000574109 SF3B4Q15427 424 aaKnown RBP eCLIP12.29□□□□□ -0.44
NDE1-209ENST00000574109 DUSP7Q16829 419 aa12.29□□□□□ -0.44
NDE1-209ENST00000574109 TMEM44Q2T9K0 475 aa12.29□□□□□ -0.44
NDE1-209ENST00000574109 IFI44LQ53G44 452 aa12.29□□□□□ -0.44
NDE1-209ENST00000574109 PRR30Q53SZ7 412 aaPredicted RBP12.29□□□□□ -0.44
NDE1-209ENST00000574109 PGM2L1Q6PCE3 622 aa12.29□□□□□ -0.44
NDE1-209ENST00000574109 ASRGL1Q7L266 308 aa12.29□□□□□ -0.44
NDE1-209ENST00000574109 CLIP4Q8N3C7 705 aa12.29□□□□□ -0.44
NDE1-209ENST00000574109 LSMEM1Q8N8F7 131 aa12.29□□□□□ -0.44
NDE1-209ENST00000574109 GALNT11Q8NCW6 608 aa12.29□□□□□ -0.44
NDE1-209ENST00000574109 FAM156AQ8NDB6 213 aa12.29□□□□□ -0.44
NDE1-209ENST00000574109 GPR32P1Q8NGA4 272 aa12.29□□□□□ -0.44
NDE1-209ENST00000574109 DNAJA4Q8WW22 397 aaPredicted RBP12.29□□□□□ -0.44
NDE1-209ENST00000574109 SLC6A15Q9H2J7 730 aa12.29□□□□□ -0.44
NDE1-209ENST00000574109 SERINC1Q9NRX5 453 aa12.29□□□□□ -0.44
NDE1-209ENST00000574109 RLIMQ9NVW2 624 aa12.29□□□□□ -0.44
NDE1-209ENST00000574109 SELENONQ9NZV5 590 aa12.29□□□□□ -0.44
NDE1-209ENST00000574109 RPS6KB2Q9UBS0 482 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms