RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 MRPL2Q5T653 305 aaKnown RBP17.66■□□□□ 0.42
SCARF1-206ENST00000573852 SYT9Q86SS6 491 aa17.66■□□□□ 0.42
SCARF1-206ENST00000573852 SIAH3Q8IW03 269 aa17.66■□□□□ 0.42
SCARF1-206ENST00000573852 C12orf76Q8N812 135 aaPredicted RBP17.66■□□□□ 0.42
SCARF1-206ENST00000573852 OR4D9Q8NGE8 314 aa17.66■□□□□ 0.42
SCARF1-206ENST00000573852 SUN5Q8TC36 379 aa17.66■□□□□ 0.42
SCARF1-206ENST00000573852 OR51J1Q9H342 316 aa17.66■□□□□ 0.42
SCARF1-206ENST00000573852 INPP5EQ9NRR6 644 aa17.66■□□□□ 0.42
SCARF1-206ENST00000573852 ELF5Q9UKW6 265 aaPredicted RBP17.66■□□□□ 0.42
SCARF1-206ENST00000573852 SIGLEC7Q9Y286 467 aa17.66■□□□□ 0.42
SCARF1-206ENST00000573852 TRAV27A0A087WT01 109 aa17.66■□□□□ 0.42
SCARF1-206ENST00000573852 LOC105369274A0A096LPK9 316 aa17.66■□□□□ 0.42
SCARF1-206ENST00000573852 A0A1W2PPK0 400 aa17.66■□□□□ 0.42
SCARF1-206ENST00000573852 SYNDIG1LA6NDD5 238 aa17.66■□□□□ 0.42
SCARF1-206ENST00000573852 PEX12O00623 359 aa17.66■□□□□ 0.42
SCARF1-206ENST00000573852 GYPBP06028 91 aa17.66■□□□□ 0.42
SCARF1-206ENST00000573852 NDUFS1P28331 727 aa17.66■□□□□ 0.42
SCARF1-206ENST00000573852 SOX9P48436 509 aa17.66■□□□□ 0.42
SCARF1-206ENST00000573852 DGCR2P98153 550 aa17.66■□□□□ 0.42
SCARF1-206ENST00000573852 SSX6Q7RTT6 188 aa17.66■□□□□ 0.42
SCARF1-206ENST00000573852 ADGRD2Q7Z7M1 963 aa17.66■□□□□ 0.42
SCARF1-206ENST00000573852 GPALPP1Q8IXQ4 340 aa17.66■□□□□ 0.42
SCARF1-206ENST00000573852 RNF113BQ8IZP6 322 aaKnown RBP17.66■□□□□ 0.42
SCARF1-206ENST00000573852 OR4N4Q8N0Y3 316 aa17.66■□□□□ 0.42
SCARF1-206ENST00000573852 BPIFA2Q96DR5 249 aa17.66■□□□□ 0.42
SCARF1-206ENST00000573852 MS4A3Q96HJ5 214 aa17.66■□□□□ 0.42
SCARF1-206ENST00000573852 TMEM74BQ9NUR3 256 aa17.66■□□□□ 0.42
SCARF1-206ENST00000573852 KCMF1Q9P0J7 381 aa17.66■□□□□ 0.42
SCARF1-206ENST00000573852 THAP10Q9P2Z0 257 aaPredicted RBP17.66■□□□□ 0.42
SCARF1-206ENST00000573852 NUBP2Q9Y5Y2 271 aa17.66■□□□□ 0.42
SCARF1-206ENST00000573852 RCBTB2O95199 551 aa17.65■□□□□ 0.42
SCARF1-206ENST00000573852 THBS1P07996 1170 aa17.65■□□□□ 0.42
SCARF1-206ENST00000573852 TNFRSF17Q02223 184 aa17.65■□□□□ 0.42
SCARF1-206ENST00000573852 TRAM1Q15629 374 aa17.65■□□□□ 0.42
SCARF1-206ENST00000573852 GARNL3Q5VVW2 1013 aa17.65■□□□□ 0.42
SCARF1-206ENST00000573852 DMKNQ6E0U4 476 aaPredicted RBP17.65■□□□□ 0.42
SCARF1-206ENST00000573852 CCDC28AQ8IWP9 274 aa17.65■□□□□ 0.42
SCARF1-206ENST00000573852 SHISA5Q8N114 240 aa17.65■□□□□ 0.42
SCARF1-206ENST00000573852 TOMM5Q8N4H5 51 aa17.65■□□□□ 0.42
SCARF1-206ENST00000573852 C7orf57Q8NEG2 295 aa17.65■□□□□ 0.42
SCARF1-206ENST00000573852 OR4E2Q8NGC2 313 aa17.65■□□□□ 0.42
SCARF1-206ENST00000573852 SMPDL3BQ92485 455 aa17.65■□□□□ 0.42
SCARF1-206ENST00000573852 GHSRQ92847 366 aa17.65■□□□□ 0.42
SCARF1-206ENST00000573852 GAL3ST3Q96A11 431 aa17.65■□□□□ 0.42
SCARF1-206ENST00000573852 PEX11GQ96HA9 241 aa17.65■□□□□ 0.42
SCARF1-206ENST00000573852 ZFP3Q96NJ6 502 aa17.65■□□□□ 0.42
SCARF1-206ENST00000573852 TTTY10Q9BZA0 68 aa17.65■□□□□ 0.42
SCARF1-206ENST00000573852 RANBP3Q9H6Z4 567 aaPredicted RBP17.65■□□□□ 0.42
SCARF1-206ENST00000573852 MRPL39Q9NYK5 338 aaKnown RBP17.65■□□□□ 0.42
SCARF1-206ENST00000573852 MRPS7Q9Y2R9 242 aaKnown RBP17.65■□□□□ 0.42
SCARF1-206ENST00000573852 BTN3A3O00478 584 aa17.65■□□□□ 0.42
SCARF1-206ENST00000573852 SNRPBP14678 240 aaKnown RBP17.65■□□□□ 0.42
SCARF1-206ENST00000573852 RAB3BP20337 219 aa17.65■□□□□ 0.42
SCARF1-206ENST00000573852 SLC2A5P22732 501 aa17.65■□□□□ 0.42
SCARF1-206ENST00000573852 PYCR1P32322 319 aa17.65■□□□□ 0.42
SCARF1-206ENST00000573852 CCR6P51684 374 aa17.65■□□□□ 0.42
SCARF1-206ENST00000573852 ID2Q02363 134 aa17.65■□□□□ 0.42
SCARF1-206ENST00000573852 CRMP1Q14194 572 aa17.65■□□□□ 0.42
SCARF1-206ENST00000573852 TCEA2Q15560 299 aa17.65■□□□□ 0.42
SCARF1-206ENST00000573852 CST6Q15828 149 aa17.65■□□□□ 0.42
SCARF1-206ENST00000573852 TEX261Q6UWH6 196 aa17.65■□□□□ 0.42
SCARF1-206ENST00000573852 HDDC3Q8N4P3 179 aa17.65■□□□□ 0.42
SCARF1-206ENST00000573852 RFLNBQ8N5W9 214 aa17.65■□□□□ 0.42
SCARF1-206ENST00000573852 OR4K14Q8NGD5 310 aa17.65■□□□□ 0.42
SCARF1-206ENST00000573852 OR51A7Q8NH64 312 aa17.65■□□□□ 0.42
SCARF1-206ENST00000573852 ZNF350Q9GZX5 532 aa17.65■□□□□ 0.42
SCARF1-206ENST00000573852 U3KQ87 197 aa17.65■□□□□ 0.42
SCARF1-206ENST00000573852 A0A1W2PP55 124 aa17.65■□□□□ 0.42
SCARF1-206ENST00000573852 A0A1W2PRG6 482 aa17.65■□□□□ 0.42
SCARF1-206ENST00000573852 SAGP10523 405 aaPredicted RBP17.65■□□□□ 0.42
SCARF1-206ENST00000573852 HACD4Q5VWC8 232 aa17.65■□□□□ 0.42
SCARF1-206ENST00000573852 CD276Q5ZPR3 534 aa17.65■□□□□ 0.42
SCARF1-206ENST00000573852 ESPNLQ6ZVH7 1005 aa17.65■□□□□ 0.42
SCARF1-206ENST00000573852 TMPRSS11FQ6ZWK6 438 aa17.65■□□□□ 0.42
SCARF1-206ENST00000573852 PAQR7Q86WK9 346 aa17.65■□□□□ 0.42
SCARF1-206ENST00000573852 ZNF619Q8N2I2 560 aa17.65■□□□□ 0.42
SCARF1-206ENST00000573852 CACNG6Q9BXT2 260 aa17.65■□□□□ 0.42
SCARF1-206ENST00000573852 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.65■□□□□ 0.421e-6■■□□□ 11.9
SCARF1-206ENST00000573852 MEPEQ9NQ76 525 aaPredicted RBP17.65■□□□□ 0.42
SCARF1-206ENST00000573852 DIABLOQ9NR28 239 aa17.65■□□□□ 0.42
SCARF1-206ENST00000573852 MAT2BQ9NZL9 334 aa17.65■□□□□ 0.42
SCARF1-206ENST00000573852 DNAH14Q0VDD8 3507 aa17.64■□□□□ 0.41
SCARF1-206ENST00000573852 ZSCAN5BA6NJL1 495 aa17.64■□□□□ 0.41
SCARF1-206ENST00000573852 MAGEB4O15481 346 aaPredicted RBP17.64■□□□□ 0.41
SCARF1-206ENST00000573852 SLC22A5O76082 557 aa17.64■□□□□ 0.41
SCARF1-206ENST00000573852 ANXA3P12429 323 aa17.64■□□□□ 0.41
SCARF1-206ENST00000573852 ATF1P18846 271 aa17.64■□□□□ 0.41
SCARF1-206ENST00000573852 RPS4Y1P22090 263 aaKnown RBP17.64■□□□□ 0.41
SCARF1-206ENST00000573852 HCCSP53701 268 aa17.64■□□□□ 0.41
SCARF1-206ENST00000573852 RUNX2Q13950 521 aa17.64■□□□□ 0.41
SCARF1-206ENST00000573852 FAAH2Q6GMR7 532 aa17.64■□□□□ 0.41
SCARF1-206ENST00000573852 SLC44A3Q8N4M1 653 aa17.64■□□□□ 0.41
SCARF1-206ENST00000573852 ZNF680Q8NEM1 530 aa17.64■□□□□ 0.41
SCARF1-206ENST00000573852 ZCCHC10Q8TBK6 192 aa17.64■□□□□ 0.41
SCARF1-206ENST00000573852 ADAP2Q9NPF8 381 aa17.64■□□□□ 0.41
SCARF1-206ENST00000573852 SLC35A3Q9Y2D2 325 aa17.64■□□□□ 0.41
SCARF1-206ENST00000573852 HYAL3O43820 417 aaPredicted RBP17.64■□□□□ 0.41
SCARF1-206ENST00000573852 ANKRD34CP0C6C1 535 aa17.64■□□□□ 0.41
SCARF1-206ENST00000573852 NID1P14543 1247 aa17.64■□□□□ 0.41
SCARF1-206ENST00000573852 NRG3P56975 720 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms