RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 KRTAP1-3Q8IUG1 177 aa15.48■□□□□ 0.07
SMG6-212ENST00000573153 TRIML2Q8N7C3 387 aa15.48■□□□□ 0.07
SMG6-212ENST00000573153 FBXO27Q8NI29 283 aa15.48■□□□□ 0.07
SMG6-212ENST00000573153 WFIKKN1Q96NZ8 548 aa15.48■□□□□ 0.07
SMG6-212ENST00000573153 SLC35A5Q9BS91 424 aa15.48■□□□□ 0.07
SMG6-212ENST00000573153 VIPAS39Q9H9C1 493 aa15.48■□□□□ 0.07
SMG6-212ENST00000573153 ZIM2Q9NZV7 527 aa15.48■□□□□ 0.07
SMG6-212ENST00000573153 ING1Q9UK53 422 aaPredicted RBP15.48■□□□□ 0.07
SMG6-212ENST00000573153 CLEC4AQ9UMR7 237 aa15.48■□□□□ 0.07
SMG6-212ENST00000573153 GPC6Q9Y625 555 aaPredicted RBP15.48■□□□□ 0.07
SMG6-212ENST00000573153 MAP1AP78559 2803 aaPredicted RBP15.48■□□□□ 0.07
SMG6-212ENST00000573153 ITPR3Q14573 2671 aa15.47■□□□□ 0.07
SMG6-212ENST00000573153 SERINC4A6NH21 518 aa15.47■□□□□ 0.07
SMG6-212ENST00000573153 ZNF264O43296 627 aa15.47■□□□□ 0.07
SMG6-212ENST00000573153 ADAM11O75078 769 aa15.47■□□□□ 0.07
SMG6-212ENST00000573153 SMNDC1O75940 238 aaKnown RBP eCLIP15.47■□□□□ 0.07
SMG6-212ENST00000573153 TGDSO95455 350 aa15.47■□□□□ 0.07
SMG6-212ENST00000573153 IL6P05231 212 aa15.47■□□□□ 0.07
SMG6-212ENST00000573153 OR12D1P0DN82 309 aa15.47■□□□□ 0.07
SMG6-212ENST00000573153 UBL4AP11441 157 aa15.47■□□□□ 0.07
SMG6-212ENST00000573153 UGT2B10P36537 528 aa15.47■□□□□ 0.07
SMG6-212ENST00000573153 CPOXP36551 454 aa15.47■□□□□ 0.07
SMG6-212ENST00000573153 CDKN2CP42773 168 aa15.47■□□□□ 0.07
SMG6-212ENST00000573153 CPA2P48052 419 aa15.47■□□□□ 0.07
SMG6-212ENST00000573153 MAPK11Q15759 364 aa15.47■□□□□ 0.07
SMG6-212ENST00000573153 ZNF239Q16600 458 aaKnown RBP15.47■□□□□ 0.07
SMG6-212ENST00000573153 TTMPQ5BVD1 217 aa15.47■□□□□ 0.07
SMG6-212ENST00000573153 ATAD3BQ5T9A4 648 aa15.47■□□□□ 0.07
SMG6-212ENST00000573153 TYW3Q6IPR3 259 aaKnown RBP15.47■□□□□ 0.07
SMG6-212ENST00000573153 EPGNQ6UW88 154 aa15.47■□□□□ 0.07
SMG6-212ENST00000573153 FRRS1Q6ZNA5 592 aa15.47■□□□□ 0.07
SMG6-212ENST00000573153 C16orf62Q7Z3J2 963 aa15.47■□□□□ 0.07
SMG6-212ENST00000573153 OR5W2Q8NH69 310 aa15.47■□□□□ 0.07
SMG6-212ENST00000573153 RNF128Q8TEB7 428 aa15.47■□□□□ 0.07
SMG6-212ENST00000573153 ZG16BQ96DA0 208 aa15.47■□□□□ 0.07
SMG6-212ENST00000573153 MBD6Q96DN6 1003 aa15.47■□□□□ 0.07
SMG6-212ENST00000573153 MRGPRX4Q96LA9 322 aa15.47■□□□□ 0.07
SMG6-212ENST00000573153 KLHL15Q96M94 604 aa15.47■□□□□ 0.07
SMG6-212ENST00000573153 OR52E6Q96RD3 313 aa15.47■□□□□ 0.07
SMG6-212ENST00000573153 ZBTB18Q99592 522 aa15.47■□□□□ 0.07
SMG6-212ENST00000573153 LAT2Q9GZY6 243 aa15.47■□□□□ 0.07
SMG6-212ENST00000573153 PLSCR4Q9NRQ2 329 aa15.47■□□□□ 0.07
SMG6-212ENST00000573153 SLC6A13Q9NSD5 602 aa15.47■□□□□ 0.07
SMG6-212ENST00000573153 CCDC154A6NI56 674 aa15.46■□□□□ 0.07
SMG6-212ENST00000573153 GTPBP1O00178 669 aaKnown RBP15.46■□□□□ 0.07
SMG6-212ENST00000573153 HMGN4O00479 90 aa15.46■□□□□ 0.07
SMG6-212ENST00000573153 SLC22A3O75751 556 aa15.46■□□□□ 0.07
SMG6-212ENST00000573153 H6PDO95479 791 aa15.46■□□□□ 0.07
SMG6-212ENST00000573153 THBDP07204 575 aa15.46■□□□□ 0.07
SMG6-212ENST00000573153 H2AFXP16104 143 aaPredicted RBP15.46■□□□□ 0.07
SMG6-212ENST00000573153 KLK2P20151 261 aa15.46■□□□□ 0.07
SMG6-212ENST00000573153 ME2P23368 584 aa15.46■□□□□ 0.07
SMG6-212ENST00000573153 PGM1P36871 562 aa15.46■□□□□ 0.07
SMG6-212ENST00000573153 MVDP53602 400 aa15.46■□□□□ 0.07
SMG6-212ENST00000573153 NME5P56597 212 aa15.46■□□□□ 0.07
SMG6-212ENST00000573153 POU4F3Q15319 338 aa15.46■□□□□ 0.07
SMG6-212ENST00000573153 TNFAIP8L2Q6P589 184 aaPredicted RBP15.46■□□□□ 0.07
SMG6-212ENST00000573153 LILRA2Q8N149 483 aa15.46■□□□□ 0.07
SMG6-212ENST00000573153 OR6K3Q8NGY3 331 aa15.46■□□□□ 0.07
SMG6-212ENST00000573153 XAGE5Q8WWM1 108 aa15.46■□□□□ 0.07
SMG6-212ENST00000573153 RAB8BQ92930 207 aa15.46■□□□□ 0.07
SMG6-212ENST00000573153 ROPN1LQ96C74 230 aa15.46■□□□□ 0.07
SMG6-212ENST00000573153 GMPPAQ96IJ6 420 aaPredicted RBP15.46■□□□□ 0.07
SMG6-212ENST00000573153 OR52B2Q96RD2 323 aa15.46■□□□□ 0.07
SMG6-212ENST00000573153 PANX1Q96RD7 426 aa15.46■□□□□ 0.07
SMG6-212ENST00000573153 INPP5KQ9BT40 448 aa15.46■□□□□ 0.07
SMG6-212ENST00000573153 TMUB1Q9BVT8 246 aa15.46■□□□□ 0.07
SMG6-212ENST00000573153 MKLN1Q9UL63 735 aa15.46■□□□□ 0.07
SMG6-212ENST00000573153 USH1CQ9Y6N9 552 aa15.46■□□□□ 0.07
SMG6-212ENST00000573153 UBDO15205 165 aa15.45■□□□□ 0.06
SMG6-212ENST00000573153 ZCCHC18P0CG32 403 aa15.45■□□□□ 0.06
SMG6-212ENST00000573153 CRYGSP22914 178 aa15.45■□□□□ 0.06
SMG6-212ENST00000573153 AGTR1P30556 359 aa15.45■□□□□ 0.06
SMG6-212ENST00000573153 CHI3L1P36222 383 aaPredicted RBP15.45■□□□□ 0.06
SMG6-212ENST00000573153 CBFBQ13951 182 aa15.45■□□□□ 0.06
SMG6-212ENST00000573153 GPR68Q15743 365 aa15.45■□□□□ 0.06
SMG6-212ENST00000573153 SGCBQ16585 318 aa15.45■□□□□ 0.06
SMG6-212ENST00000573153 PDSS1Q5T2R2 415 aa15.45■□□□□ 0.06
SMG6-212ENST00000573153 HBMQ6B0K9 141 aa15.45■□□□□ 0.06
SMG6-212ENST00000573153 NXNQ6DKJ4 435 aa15.45■□□□□ 0.06
SMG6-212ENST00000573153 HDXQ7Z353 690 aa15.45■□□□□ 0.06
SMG6-212ENST00000573153 ZNF550Q7Z398 422 aa15.45■□□□□ 0.06
SMG6-212ENST00000573153 PMM1Q92871 262 aa15.45■□□□□ 0.06
SMG6-212ENST00000573153 TRNT1Q96Q11 434 aaKnown RBP15.45■□□□□ 0.06
SMG6-212ENST00000573153 HS3ST6Q96QI5 342 aa15.45■□□□□ 0.06
SMG6-212ENST00000573153 GLRX2Q9NS18 164 aa15.45■□□□□ 0.06
SMG6-212ENST00000573153 KLHL28Q9NXS3 571 aa15.45■□□□□ 0.06
SMG6-212ENST00000573153 ELOVL5Q9NYP7 299 aa15.45■□□□□ 0.06
SMG6-212ENST00000573153 MCTS1Q9ULC4 181 aaKnown RBP15.45■□□□□ 0.06
SMG6-212ENST00000573153 LIPT1Q9Y234 373 aa15.45■□□□□ 0.06
SMG6-212ENST00000573153 SLC35A3Q9Y2D2 325 aa15.45■□□□□ 0.06
SMG6-212ENST00000573153 WDR45Q9Y484 360 aa15.45■□□□□ 0.06
SMG6-212ENST00000573153 CLDN24A6NM45 220 aa15.44■□□□□ 0.06
SMG6-212ENST00000573153 GJE1A6NN92 205 aa15.44■□□□□ 0.06
SMG6-212ENST00000573153 HMGB1P1B2RPK0 211 aaPredicted RBP15.44■□□□□ 0.06
SMG6-212ENST00000573153 CD1EP15812 388 aa15.44■□□□□ 0.06
SMG6-212ENST00000573153 CD53P19397 219 aa15.44■□□□□ 0.06
SMG6-212ENST00000573153 SFTPDP35247 375 aa15.44■□□□□ 0.06
SMG6-212ENST00000573153 ANXA11P50995 505 aaKnown RBP15.44■□□□□ 0.06
SMG6-212ENST00000573153 QPRTQ15274 297 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms