RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 INHBBP09529 407 aa16.11■□□□□ 0.17
CHD3-214ENST00000572579 PSMB1P20618 241 aaKnown RBP16.11■□□□□ 0.17
CHD3-214ENST00000572579 ME2P23368 584 aa16.11■□□□□ 0.17
CHD3-214ENST00000572579 SUMO3P55854 103 aaPredicted RBP16.11■□□□□ 0.17
CHD3-214ENST00000572579 FUT5Q11128 374 aa16.11■□□□□ 0.17
CHD3-214ENST00000572579 GPR68Q15743 365 aa16.11■□□□□ 0.17
CHD3-214ENST00000572579 SMU1Q2TAY7 513 aa16.11■□□□□ 0.17
CHD3-214ENST00000572579 KRT71Q3SY84 523 aa16.11■□□□□ 0.17
CHD3-214ENST00000572579 AP1ARQ63HQ0 302 aa16.11■□□□□ 0.17
CHD3-214ENST00000572579 HEPHL1Q6MZM0 1159 aa16.11■□□□□ 0.17
CHD3-214ENST00000572579 SEZ6L2Q6UXD5 910 aa16.11■□□□□ 0.17
CHD3-214ENST00000572579 LRRC75A-AS1Q8N1F1 130 aa16.11■□□□□ 0.17
CHD3-214ENST00000572579 ZNF527Q8NB42 609 aa16.11■□□□□ 0.17
CHD3-214ENST00000572579 OR8J2Q8NGG1 315 aa16.11■□□□□ 0.17
CHD3-214ENST00000572579 LILRB1Q8NHL6 650 aaPredicted RBP16.11■□□□□ 0.17
CHD3-214ENST00000572579 RFWD2Q8NHY2 731 aa16.11■□□□□ 0.17
CHD3-214ENST00000572579 ZNF75CPQ92670 426 aaPredicted RBP16.11■□□□□ 0.17
CHD3-214ENST00000572579 PIGTQ969N2 578 aa16.11■□□□□ 0.17
CHD3-214ENST00000572579 ZNF350Q9GZX5 532 aa16.11■□□□□ 0.17
CHD3-214ENST00000572579 PNPOQ9NVS9 261 aa16.11■□□□□ 0.17
CHD3-214ENST00000572579 HAO1Q9UJM8 370 aa16.11■□□□□ 0.17
CHD3-214ENST00000572579 MKLN1Q9UL63 735 aa16.11■□□□□ 0.17
CHD3-214ENST00000572579 GPR52Q9Y2T5 361 aa16.11■□□□□ 0.17
CHD3-214ENST00000572579 USF3Q68DE3 2245 aa16.11■□□□□ 0.17
CHD3-214ENST00000572579 CSPG4Q6UVK1 2322 aa16.11■□□□□ 0.17
CHD3-214ENST00000572579 RNF103-CHMP3A0A140T963 221 aa16.1■□□□□ 0.17
CHD3-214ENST00000572579 BIRC5O15392 142 aa16.1■□□□□ 0.17
CHD3-214ENST00000572579 ZNF264O43296 627 aa16.1■□□□□ 0.17
CHD3-214ENST00000572579 EIF4E2O60573 245 aaKnown RBP16.1■□□□□ 0.17
CHD3-214ENST00000572579 ADAM11O75078 769 aa16.1■□□□□ 0.17
CHD3-214ENST00000572579 NUDT14O95848 222 aa16.1■□□□□ 0.17
CHD3-214ENST00000572579 BGNP21810 368 aa16.1■□□□□ 0.17
CHD3-214ENST00000572579 SOAT1P35610 550 aa16.1■□□□□ 0.17
CHD3-214ENST00000572579 ARHGAP11BQ3KRB8 267 aa16.1■□□□□ 0.17
CHD3-214ENST00000572579 BEX5Q5H9J7 111 aa16.1■□□□□ 0.17
CHD3-214ENST00000572579 BEND4Q6ZU67 534 aa16.1■□□□□ 0.17
CHD3-214ENST00000572579 FCRLAQ7L513 359 aa16.1■□□□□ 0.17
CHD3-214ENST00000572579 BIVMQ86UB2 503 aa16.1■□□□□ 0.17
CHD3-214ENST00000572579 ZNF614Q8N883 585 aa16.1■□□□□ 0.17
CHD3-214ENST00000572579 RAB3IL1Q8TBN0 382 aa16.1■□□□□ 0.17
CHD3-214ENST00000572579 MIPOL1Q8TD10 442 aa16.1■□□□□ 0.17
CHD3-214ENST00000572579 RAB8BQ92930 207 aa16.1■□□□□ 0.17
CHD3-214ENST00000572579 S100PBPQ96BU1 408 aa16.1■□□□□ 0.17
CHD3-214ENST00000572579 MOAP1Q96BY2 351 aa16.1■□□□□ 0.17
CHD3-214ENST00000572579 PLPPR2Q96GM1 343 aa16.1■□□□□ 0.17
CHD3-214ENST00000572579 MRGPRX4Q96LA9 322 aa16.1■□□□□ 0.17
CHD3-214ENST00000572579 CCL19Q99731 98 aa16.1■□□□□ 0.17
CHD3-214ENST00000572579 THUMPD3Q9BV44 507 aaKnown RBP16.1■□□□□ 0.17
CHD3-214ENST00000572579 LAT2Q9GZY6 243 aa16.1■□□□□ 0.17
CHD3-214ENST00000572579 OR51I1Q9H343 314 aa16.1■□□□□ 0.17
CHD3-214ENST00000572579 KLHL13Q9P2N7 655 aa16.1■□□□□ 0.17
CHD3-214ENST00000572579 RAP2CQ9Y3L5 183 aa16.1■□□□□ 0.17
CHD3-214ENST00000572579 TRIM64A6NGJ6 449 aa16.09■□□□□ 0.17
CHD3-214ENST00000572579 TRIM64BA6NI03 449 aa16.09■□□□□ 0.17
CHD3-214ENST00000572579 C9JVG2 144 aa16.09■□□□□ 0.17
CHD3-214ENST00000572579 H3BNH8 94 aa16.09■□□□□ 0.17
CHD3-214ENST00000572579 SOX30O94993 753 aa16.09■□□□□ 0.17
CHD3-214ENST00000572579 KRT16P08779 473 aa16.09■□□□□ 0.17
CHD3-214ENST00000572579 OR12D1P0DN82 309 aa16.09■□□□□ 0.17
CHD3-214ENST00000572579 UBL4AP11441 157 aa16.09■□□□□ 0.17
CHD3-214ENST00000572579 PPP3CBP16298 524 aa16.09■□□□□ 0.17
CHD3-214ENST00000572579 IL12AP29459 219 aa16.09■□□□□ 0.17
CHD3-214ENST00000572579 SLC1A6P48664 564 aa16.09■□□□□ 0.17
CHD3-214ENST00000572579 RPL14P50914 215 aaKnown RBP16.09■□□□□ 0.17
CHD3-214ENST00000572579 SESN3P58005 492 aa16.09■□□□□ 0.17
CHD3-214ENST00000572579 LTBQ06643 244 aa16.09■□□□□ 0.17
CHD3-214ENST00000572579 TIGD2Q4W5G0 525 aa16.09■□□□□ 0.17
CHD3-214ENST00000572579 PDSS1Q5T2R2 415 aa16.09■□□□□ 0.17
CHD3-214ENST00000572579 TYW3Q6IPR3 259 aaKnown RBP16.09■□□□□ 0.17
CHD3-214ENST00000572579 ZNF704Q6ZNC4 412 aaPredicted RBP16.09■□□□□ 0.17
CHD3-214ENST00000572579 HMGN2P46Q86SG4 172 aa16.09■□□□□ 0.17
CHD3-214ENST00000572579 WFDC8Q8IUA0 241 aa16.09■□□□□ 0.17
CHD3-214ENST00000572579 ZFP90Q8TF47 636 aa16.09■□□□□ 0.17
CHD3-214ENST00000572579 CPNE4Q96A23 557 aaPredicted RBP16.09■□□□□ 0.17
CHD3-214ENST00000572579 ZNF775Q96BV0 537 aaPredicted RBP16.09■□□□□ 0.17
CHD3-214ENST00000572579 PERPQ96FX8 193 aa16.09■□□□□ 0.17
CHD3-214ENST00000572579 Q96MF0 132 aa16.09■□□□□ 0.17
CHD3-214ENST00000572579 ZIM3Q96PE6 472 aa16.09■□□□□ 0.17
CHD3-214ENST00000572579 NUF2Q9BZD4 464 aa16.09■□□□□ 0.17
CHD3-214ENST00000572579 SSU72Q9NP77 194 aaKnown RBP16.09■□□□□ 0.17
CHD3-214ENST00000572579 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.09■□□□□ 0.17
CHD3-214ENST00000572579 RAI1Q7Z5J4 1906 aaPredicted RBP16.09■□□□□ 0.17
CHD3-214ENST00000572579 NSD1Q96L73 2696 aaPredicted RBP16.09■□□□□ 0.17
CHD3-214ENST00000572579 PRSS51A0A1B0GVH4 220 aa16.08■□□□□ 0.16
CHD3-214ENST00000572579 CLDN24A6NM45 220 aa16.08■□□□□ 0.16
CHD3-214ENST00000572579 H7C1Q1 480 aa16.08■□□□□ 0.16
CHD3-214ENST00000572579 RGS16O15492 202 aaPredicted RBP16.08■□□□□ 0.16
CHD3-214ENST00000572579 STX11O75558 287 aa16.08■□□□□ 0.16
CHD3-214ENST00000572579 PRKD3O94806 890 aa16.08■□□□□ 0.16
CHD3-214ENST00000572579 LY6G6DO95868 133 aa16.08■□□□□ 0.16
CHD3-214ENST00000572579 YES1P07947 543 aa16.08■□□□□ 0.16
CHD3-214ENST00000572579 ALDOCP09972 364 aaKnown RBP16.08■□□□□ 0.16
CHD3-214ENST00000572579 FPR1P21462 350 aa16.08■□□□□ 0.16
CHD3-214ENST00000572579 PGM1P36871 562 aa16.08■□□□□ 0.16
CHD3-214ENST00000572579 RAC3P60763 192 aa16.08■□□□□ 0.16
CHD3-214ENST00000572579 MAD2L1Q13257 205 aaPredicted RBP16.08■□□□□ 0.16
CHD3-214ENST00000572579 CAPRIN1Q14444 709 aaKnown RBP16.08■□□□□ 0.16
CHD3-214ENST00000572579 CASP8Q14790 479 aa16.08■□□□□ 0.16
CHD3-214ENST00000572579 RNPS1Q15287 305 aaKnown RBP16.08■□□□□ 0.16
CHD3-214ENST00000572579 SPANXN4Q5MJ08 99 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms