RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 TBC1D3EA0A087X179 549 aa9.99□□□□□ -0.81
CCDC40-207ENST00000572253 TRAV1-2A0A0B4J238 106 aa9.99□□□□□ -0.81
CCDC40-207ENST00000572253 E9PI62 339 aa9.99□□□□□ -0.81
CCDC40-207ENST00000572253 POU3F3P20264 500 aaPredicted RBP9.99□□□□□ -0.81
CCDC40-207ENST00000572253 DGCR2P98153 550 aa9.99□□□□□ -0.81
CCDC40-207ENST00000572253 FZD5Q13467 585 aa9.99□□□□□ -0.81
CCDC40-207ENST00000572253 GAS6Q14393 721 aa9.99□□□□□ -0.81
CCDC40-207ENST00000572253 AGERQ15109 404 aa9.99□□□□□ -0.81
CCDC40-207ENST00000572253 CEBPEQ15744 281 aa9.99□□□□□ -0.81
CCDC40-207ENST00000572253 AMZ1Q400G9 498 aa9.99□□□□□ -0.81
CCDC40-207ENST00000572253 SMUG1Q53HV7 270 aa9.99□□□□□ -0.81
CCDC40-207ENST00000572253 ASPGQ86U10 573 aa9.99□□□□□ -0.81
CCDC40-207ENST00000572253 CACUL1Q86Y37 369 aa9.99□□□□□ -0.81
CCDC40-207ENST00000572253 GSDMCQ9BYG8 508 aa9.99□□□□□ -0.81
CCDC40-207ENST00000572253 TMEM168Q9H0V1 697 aa9.99□□□□□ -0.81
CCDC40-207ENST00000572253 NKIRAS2Q9NYR9 191 aa9.99□□□□□ -0.81
CCDC40-207ENST00000572253 LRRK1Q38SD2 2015 aa9.98□□□□□ -0.81
CCDC40-207ENST00000572253 MEIKINA0A087WXM9 373 aa9.98□□□□□ -0.81
CCDC40-207ENST00000572253 TFPIP10646 304 aa9.98□□□□□ -0.81
CCDC40-207ENST00000572253 MAKP20794 623 aa9.98□□□□□ -0.81
CCDC40-207ENST00000572253 OR12D2P58182 307 aa9.98□□□□□ -0.81
CCDC40-207ENST00000572253 AP3S2P59780 193 aa9.98□□□□□ -0.81
CCDC40-207ENST00000572253 SLC36A2Q495M3 483 aa9.98□□□□□ -0.81
CCDC40-207ENST00000572253 GARNL3Q5VVW2 1013 aa9.98□□□□□ -0.81
CCDC40-207ENST00000572253 FAM111BQ6SJ93 734 aa9.98□□□□□ -0.81
CCDC40-207ENST00000572253 COMMD7Q86VX2 200 aa9.98□□□□□ -0.81
CCDC40-207ENST00000572253 ETFBKMTQ8IXQ9 262 aa9.98□□□□□ -0.81
CCDC40-207ENST00000572253 OR6C4Q8NGE1 309 aa9.98□□□□□ -0.81
CCDC40-207ENST00000572253 OR13C2Q8NGS9 318 aa9.98□□□□□ -0.81
CCDC40-207ENST00000572253 PFN4Q8NHR9 129 aa9.98□□□□□ -0.81
CCDC40-207ENST00000572253 TEX101Q9BY14 249 aa9.98□□□□□ -0.81
CCDC40-207ENST00000572253 GPR171O14626 319 aa9.98□□□□□ -0.81
CCDC40-207ENST00000572253 LATO43561 262 aa9.98□□□□□ -0.81
CCDC40-207ENST00000572253 ZIC2O95409 532 aaPredicted RBP9.98□□□□□ -0.81
CCDC40-207ENST00000572253 SLC35G6P0C7Q6 338 aa9.98□□□□□ -0.81
CCDC40-207ENST00000572253 SNRPBP14678 240 aaKnown RBP9.98□□□□□ -0.81
CCDC40-207ENST00000572253 LCN1P31025 176 aa9.98□□□□□ -0.81
CCDC40-207ENST00000572253 CLDN2P57739 230 aa9.98□□□□□ -0.81
CCDC40-207ENST00000572253 DYRK1AQ13627 763 aa9.98□□□□□ -0.81
CCDC40-207ENST00000572253 PXKQ7Z7A4 578 aa9.98□□□□□ -0.81
CCDC40-207ENST00000572253 COX18Q8N8Q8 333 aa9.98□□□□□ -0.81
CCDC40-207ENST00000572253 SPERTQ8NA61 448 aa9.98□□□□□ -0.81
CCDC40-207ENST00000572253 SDF2Q99470 211 aa9.98□□□□□ -0.81
CCDC40-207ENST00000572253 HCAR1Q9BXC0 346 aa9.98□□□□□ -0.81
CCDC40-207ENST00000572253 RNF208Q9H0X6 261 aa9.98□□□□□ -0.81
CCDC40-207ENST00000572253 CLDND1Q9NY35 253 aa9.98□□□□□ -0.81
CCDC40-207ENST00000572253 FBXL21Q9UKT6 434 aa9.98□□□□□ -0.81
CCDC40-207ENST00000572253 COL4A3Q01955 1670 aa9.98□□□□□ -0.81
CCDC40-207ENST00000572253 TRABD2BA6NFA1 517 aa9.98□□□□□ -0.81
CCDC40-207ENST00000572253 PRAF2O60831 178 aa9.98□□□□□ -0.81
CCDC40-207ENST00000572253 KCNJ13O60928 360 aa9.98□□□□□ -0.81
CCDC40-207ENST00000572253 MT-ND4P03905 459 aa9.98□□□□□ -0.81
CCDC40-207ENST00000572253 GKN3PP0CG01 181 aa9.98□□□□□ -0.81
CCDC40-207ENST00000572253 HOXB3P14651 431 aaPredicted RBP9.98□□□□□ -0.81
CCDC40-207ENST00000572253 SLC6A6P31641 620 aa9.98□□□□□ -0.81
CCDC40-207ENST00000572253 CCR6P51684 374 aa9.98□□□□□ -0.81
CCDC40-207ENST00000572253 ZNF136P52737 540 aa9.98□□□□□ -0.81
CCDC40-207ENST00000572253 ACTA2P62736 377 aa9.98□□□□□ -0.81
CCDC40-207ENST00000572253 ACTG2P63267 376 aa9.98□□□□□ -0.81
CCDC40-207ENST00000572253 EEF1A1P68104 462 aaKnown RBP9.98□□□□□ -0.81
CCDC40-207ENST00000572253 POU4F3Q15319 338 aa9.98□□□□□ -0.81
CCDC40-207ENST00000572253 DUSP5Q16690 384 aa9.98□□□□□ -0.81
CCDC40-207ENST00000572253 MRPL2Q5T653 305 aaKnown RBP9.98□□□□□ -0.81
CCDC40-207ENST00000572253 FAM69AQ5T7M9 428 aa9.98□□□□□ -0.81
CCDC40-207ENST00000572253 DMKNQ6E0U4 476 aaPredicted RBP9.98□□□□□ -0.81
CCDC40-207ENST00000572253 ARHGAP11AQ6P4F7 1023 aa9.98□□□□□ -0.81
CCDC40-207ENST00000572253 PRSS27Q9BQR3 290 aa9.98□□□□□ -0.81
CCDC40-207ENST00000572253 POLMQ9NP87 494 aaPredicted RBP9.98□□□□□ -0.81
CCDC40-207ENST00000572253 ADAP2Q9NPF8 381 aa9.98□□□□□ -0.81
CCDC40-207ENST00000572253 ZNF223Q9UK11 482 aaPredicted RBP9.98□□□□□ -0.81
CCDC40-207ENST00000572253 MAB21L2Q9Y586 359 aa9.98□□□□□ -0.81
CCDC40-207ENST00000572253 HEBP2Q9Y5Z4 205 aa9.98□□□□□ -0.81
CCDC40-207ENST00000572253 A0A0G2JK05 382 aa9.97□□□□□ -0.81
CCDC40-207ENST00000572253 OR52A4PA6NMU1 304 aa9.97□□□□□ -0.81
CCDC40-207ENST00000572253 UGT2B7P16662 529 aa9.97□□□□□ -0.81
CCDC40-207ENST00000572253 FUT1P19526 365 aa9.97□□□□□ -0.81
CCDC40-207ENST00000572253 ZNF10P21506 573 aaPredicted RBP9.97□□□□□ -0.81
CCDC40-207ENST00000572253 RPS15AP62244 130 aaKnown RBP9.97□□□□□ -0.81
CCDC40-207ENST00000572253 TNFRSF17Q02223 184 aa9.97□□□□□ -0.81
CCDC40-207ENST00000572253 MESP2Q0VG99 397 aa9.97□□□□□ -0.81
CCDC40-207ENST00000572253 SGCGQ13326 291 aa9.97□□□□□ -0.81
CCDC40-207ENST00000572253 GSG1Q2KHT4 349 aa9.97□□□□□ -0.81
CCDC40-207ENST00000572253 FBXL6Q8N531 539 aa9.97□□□□□ -0.81
CCDC40-207ENST00000572253 C17orf47Q8NEP4 570 aa9.97□□□□□ -0.81
CCDC40-207ENST00000572253 OR51A7Q8NH64 312 aa9.97□□□□□ -0.81
CCDC40-207ENST00000572253 KISS1RQ969F8 398 aaPredicted RBP9.97□□□□□ -0.81
CCDC40-207ENST00000572253 CAPNS2Q96L46 248 aa9.97□□□□□ -0.81
CCDC40-207ENST00000572253 SORCS2Q96PQ0 1159 aa9.97□□□□□ -0.81
CCDC40-207ENST00000572253 ERVMER34-1Q9H9K5 563 aa9.97□□□□□ -0.81
CCDC40-207ENST00000572253 COLEC10Q9Y6Z7 277 aa9.97□□□□□ -0.81
CCDC40-207ENST00000572253 URADA6NGE7 173 aa9.97□□□□□ -0.81
CCDC40-207ENST00000572253 ZNF879B4DU55 563 aa9.97□□□□□ -0.81
CCDC40-207ENST00000572253 RFXAPO00287 272 aa9.97□□□□□ -0.81
CCDC40-207ENST00000572253 FMO6PO60774 539 aa9.97□□□□□ -0.81
CCDC40-207ENST00000572253 PEX14O75381 377 aa9.97□□□□□ -0.81
CCDC40-207ENST00000572253 SULT1A3P0DMM9 295 aa9.97□□□□□ -0.81
CCDC40-207ENST00000572253 SULT1A4P0DMN0 295 aa9.97□□□□□ -0.81
CCDC40-207ENST00000572253 CSF2RAP15509 400 aa9.97□□□□□ -0.81
CCDC40-207ENST00000572253 CXCL3P19876 107 aa9.97□□□□□ -0.81
CCDC40-207ENST00000572253 LGALS3BPQ08380 585 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms