RNA–Protein interactions for RNA: ENST00000571725.1

RPA1-204, Transcript of replication protein A1, humanhuman

TSL 5

Gene RPA1, Length 413 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-204ENST00000571725 KRT13P13646 458 aa2.45□□□□□ -2.02
RPA1-204ENST00000571725 UQCRBP14927 111 aa2.45□□□□□ -2.02
RPA1-204ENST00000571725 PSMA2P25787 234 aa2.45□□□□□ -2.02
RPA1-204ENST00000571725 TNFSF9P41273 254 aa2.45□□□□□ -2.02
RPA1-204ENST00000571725 ACAA2P42765 397 aaKnown RBP2.45□□□□□ -2.02
RPA1-204ENST00000571725 ACOT2P49753 483 aa2.45□□□□□ -2.02
RPA1-204ENST00000571725 EMDP50402 254 aa2.45□□□□□ -2.02
RPA1-204ENST00000571725 TKTL1P51854 596 aa2.45□□□□□ -2.02
RPA1-204ENST00000571725 AP3M2P53677 418 aa2.45□□□□□ -2.02
RPA1-204ENST00000571725 RPS4XP62701 263 aaKnown RBP2.45□□□□□ -2.02
RPA1-204ENST00000571725 PPIAP62937 165 aaKnown RBP2.45□□□□□ -2.02
RPA1-204ENST00000571725 CYP24A1Q07973 514 aa2.45□□□□□ -2.02
RPA1-204ENST00000571725 FCHO2Q0JRZ9 810 aa2.45□□□□□ -2.02
RPA1-204ENST00000571725 CALCOCO2Q13137 446 aa2.45□□□□□ -2.02
RPA1-204ENST00000571725 CEBPEQ15744 281 aa2.45□□□□□ -2.02
RPA1-204ENST00000571725 ZBTB6Q15916 424 aa2.45□□□□□ -2.02
RPA1-204ENST00000571725 SNRNP35Q16560 246 aaKnown RBP2.45□□□□□ -2.02
RPA1-204ENST00000571725 CAMK4Q16566 473 aa2.45□□□□□ -2.02
RPA1-204ENST00000571725 POM121L1PQ3SYA9 428 aa2.45□□□□□ -2.02
RPA1-204ENST00000571725 ZNF311Q5JNZ3 666 aa2.45□□□□□ -2.02
RPA1-204ENST00000571725 LDLRAP1Q5SW96 308 aa2.45□□□□□ -2.02
RPA1-204ENST00000571725 RIPPLY2Q5TAB7 128 aa2.45□□□□□ -2.02
RPA1-204ENST00000571725 ZC2HC1BQ5TFG8 222 aa2.45□□□□□ -2.02
RPA1-204ENST00000571725 LIPKQ5VXJ0 399 aa2.45□□□□□ -2.02
RPA1-204ENST00000571725 REP15Q6BDI9 236 aa2.45□□□□□ -2.02
RPA1-204ENST00000571725 ZNF613Q6PF04 617 aa2.45□□□□□ -2.02
RPA1-204ENST00000571725 SASS6Q6UVJ0 657 aa2.45□□□□□ -2.02
RPA1-204ENST00000571725 ALKAL1Q6UXT8 129 aa2.45□□□□□ -2.02
RPA1-204ENST00000571725 PAQR9Q6ZVX9 377 aa2.45□□□□□ -2.02
RPA1-204ENST00000571725 NUFIP2Q7Z417 695 aaKnown RBP2.45□□□□□ -2.02
RPA1-204ENST00000571725 KCNMB4Q86W47 210 aa2.45□□□□□ -2.02
RPA1-204ENST00000571725 LRRC49Q8IUZ0 686 aa2.45□□□□□ -2.02
RPA1-204ENST00000571725 WDR49Q8IV35 697 aa2.45□□□□□ -2.02
RPA1-204ENST00000571725 PHC2Q8IXK0 858 aa2.45□□□□□ -2.02
RPA1-204ENST00000571725 EFCAB13Q8IY85 973 aa2.45□□□□□ -2.02
RPA1-204ENST00000571725 CENPLQ8N0S6 344 aaPredicted RBP2.45□□□□□ -2.02
RPA1-204ENST00000571725 SLC39A11Q8N1S5 342 aa2.45□□□□□ -2.02
RPA1-204ENST00000571725 ARL6IP6Q8N6S5 226 aa2.45□□□□□ -2.02
RPA1-204ENST00000571725 LRRC52Q8N7C0 313 aa2.45□□□□□ -2.02
RPA1-204ENST00000571725 ZBTB44Q8NCP5 570 aa2.45□□□□□ -2.02
RPA1-204ENST00000571725 SELENOMQ8WWX9 145 aa2.45□□□□□ -2.02
RPA1-204ENST00000571725 NELFBQ8WX92 580 aa2.45□□□□□ -2.02
RPA1-204ENST00000571725 MOCOSQ96EN8 888 aa2.45□□□□□ -2.02
RPA1-204ENST00000571725 ANKRD36BP1Q96IX9 119 aa2.45□□□□□ -2.02
RPA1-204ENST00000571725 ELMO2Q96JJ3 720 aa2.45□□□□□ -2.02
RPA1-204ENST00000571725 RCHY1Q96PM5 261 aa2.45□□□□□ -2.02
RPA1-204ENST00000571725 BPIFA3Q9BQP9 254 aa2.45□□□□□ -2.02
RPA1-204ENST00000571725 LRRC61Q9BV99 259 aa2.45□□□□□ -2.02
RPA1-204ENST00000571725 TPPP3Q9BW30 176 aa2.45□□□□□ -2.02
RPA1-204ENST00000571725 ZNF416Q9BWM5 594 aa2.45□□□□□ -2.02
RPA1-204ENST00000571725 OCR1Q9BZK8 76 aa2.45□□□□□ -2.02
RPA1-204ENST00000571725 TUBB1Q9H4B7 451 aa2.45□□□□□ -2.02
RPA1-204ENST00000571725 CWH43Q9H720 699 aa2.45□□□□□ -2.02
RPA1-204ENST00000571725 ABCC13Q9NSE7 274 aa2.45□□□□□ -2.02
RPA1-204ENST00000571725 SLC35D1Q9NTN3 355 aa2.45□□□□□ -2.02
RPA1-204ENST00000571725 RBAKQ9NYW8 714 aaPredicted RBP2.45□□□□□ -2.02
RPA1-204ENST00000571725 MIOXQ9UGB7 285 aa2.45□□□□□ -2.02
RPA1-204ENST00000571725 RWDD2AQ9UIY3 292 aa2.45□□□□□ -2.02
RPA1-204ENST00000571725 IKZF3Q9UKT9 509 aa2.45□□□□□ -2.02
RPA1-204ENST00000571725 EMCNQ9ULC0 261 aa2.45□□□□□ -2.02
RPA1-204ENST00000571725 HES2Q9Y543 173 aa2.45□□□□□ -2.02
RPA1-204ENST00000571725 MMP24Q9Y5R2 645 aa2.45□□□□□ -2.02
RPA1-204ENST00000571725 CPQQ9Y646 472 aa2.45□□□□□ -2.02
RPA1-204ENST00000571725 PLXNA4Q9HCM2 1894 aa2.45□□□□□ -2.02
RPA1-204ENST00000571725 SF3B1O75533 1304 aaKnown RBP eCLIP2.44□□□□□ -2.024e-6■■■■■ 34.5
RPA1-204ENST00000571725 A0A087X002 238 aa2.44□□□□□ -2.02
RPA1-204ENST00000571725 A0A0A6YYD4 124 aa2.44□□□□□ -2.02
RPA1-204ENST00000571725 SH3PXD2BA1X283 911 aa2.44□□□□□ -2.02
RPA1-204ENST00000571725 GOLGA8IPA6NC78 632 aa2.44□□□□□ -2.02
RPA1-204ENST00000571725 TRIM49BA6NDI0 452 aa2.44□□□□□ -2.02
RPA1-204ENST00000571725 GOLGA8JA6NMD2 632 aa2.44□□□□□ -2.02
RPA1-204ENST00000571725 LRRIQ3A6PVS8 624 aaPredicted RBP2.44□□□□□ -2.02
RPA1-204ENST00000571725 SRRM4A7MD48 611 aaKnown RBP2.44□□□□□ -2.02
RPA1-204ENST00000571725 WASH3PC4AMC7 463 aa2.44□□□□□ -2.02
RPA1-204ENST00000571725 C11orf98E9PRG8 122 aa2.44□□□□□ -2.02
RPA1-204ENST00000571725 H7C423 109 aa2.44□□□□□ -2.02
RPA1-204ENST00000571725 PIRO00625 290 aa2.44□□□□□ -2.02
RPA1-204ENST00000571725 TRAPPC3O43617 180 aa2.44□□□□□ -2.02
RPA1-204ENST00000571725 STX10O60499 249 aa2.44□□□□□ -2.02
RPA1-204ENST00000571725 ZG16O60844 167 aa2.44□□□□□ -2.02
RPA1-204ENST00000571725 N4BP1O75113 896 aaKnown RBP2.44□□□□□ -2.02
RPA1-204ENST00000571725 B3GAT3O94766 335 aa2.44□□□□□ -2.02
RPA1-204ENST00000571725 STK17BO94768 372 aa2.44□□□□□ -2.02
RPA1-204ENST00000571725 ECDO95905 644 aaPredicted RBP2.44□□□□□ -2.02
RPA1-204ENST00000571725 GOT2P00505 430 aaKnown RBP2.44□□□□□ -2.02
RPA1-204ENST00000571725 TNNC2P02585 160 aa2.44□□□□□ -2.02
RPA1-204ENST00000571725 H2AFZP0C0S5 128 aa2.44□□□□□ -2.02
RPA1-204ENST00000571725 OR9G9P0C7N8 305 aa2.44□□□□□ -2.02
RPA1-204ENST00000571725 ZSCAN5DPP0CG00 497 aa2.44□□□□□ -2.02
RPA1-204ENST00000571725 H2AFXP16104 143 aaPredicted RBP2.44□□□□□ -2.02
RPA1-204ENST00000571725 TNNI1P19237 187 aa2.44□□□□□ -2.02
RPA1-204ENST00000571725 HTR2AP28223 471 aa2.44□□□□□ -2.02
RPA1-204ENST00000571725 PRDX6P30041 224 aa2.44□□□□□ -2.02
RPA1-204ENST00000571725 GTF2H1P32780 548 aa2.44□□□□□ -2.02
RPA1-204ENST00000571725 MDH1P40925 334 aaKnown RBP2.44□□□□□ -2.02
RPA1-204ENST00000571725 MTIF2P46199 727 aaKnown RBP2.44□□□□□ -2.02
RPA1-204ENST00000571725 BRCC3P46736 316 aa2.44□□□□□ -2.02
RPA1-204ENST00000571725 OR1G1P47890 313 aa2.44□□□□□ -2.02
RPA1-204ENST00000571725 SLC11A1P49279 550 aa2.44□□□□□ -2.02
RPA1-204ENST00000571725 CASP4P49662 377 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms