RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 FLRT3Q9NZU0 649 aa3.53□□□□□ -1.84
NUP88-202ENST00000570937 TMEM9Q9P0T7 183 aa3.53□□□□□ -1.84
NUP88-202ENST00000570937 RHCGQ9UBD6 479 aa3.53□□□□□ -1.84
NUP88-202ENST00000570937 MTRF1LQ9UGC7 380 aaKnown RBP3.53□□□□□ -1.84
NUP88-202ENST00000570937 TRMT6Q9UJA5 497 aaKnown RBP3.53□□□□□ -1.84
NUP88-202ENST00000570937 FBXO5Q9UKT4 447 aa3.53□□□□□ -1.84
NUP88-202ENST00000570937 POMT2Q9UKY4 750 aa3.53□□□□□ -1.84
NUP88-202ENST00000570937 SNX24Q9Y343 169 aa3.53□□□□□ -1.84
NUP88-202ENST00000570937 PRSS21Q9Y6M0 314 aa3.53□□□□□ -1.84
NUP88-202ENST00000570937 AP1M2Q9Y6Q5 423 aa3.53□□□□□ -1.84
NUP88-202ENST00000570937 NCOR2Q9Y618 2525 aa3.53□□□□□ -1.84
NUP88-202ENST00000570937 CFAP47Q6ZTR5 3102 aa3.53□□□□□ -1.85
NUP88-202ENST00000570937 PTPRBP23467 1997 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 LRP4O75096 1905 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 SPTBN2O15020 2390 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 NOTCH3Q9UM47 2321 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 IGHV5-51A0A0C4DH38 117 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 A0A1B0GU03 582 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 A0A1W2PN81 502 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 SLC9B1P1A6NJY1 282 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 IQCF5A8MTL0 148 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 E7EQ34 232 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 BTN3A3O00478 584 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 TXNDC9O14530 226 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 RASGRF2O14827 1237 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 NIPSNAP2O75323 286 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 SCRG1O75711 98 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 STK17BO94768 372 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 C8GP07360 202 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 MPC1LP0DKB6 136 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 SFTPCP11686 197 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 ITIH1P19827 911 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 CYP2A7P20853 494 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 IVDP26440 423 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 CEACAM8P31997 349 aaPredicted RBP3.52□□□□□ -1.85
NUP88-202ENST00000570937 PHBP35232 272 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 RPA3P35244 121 aaPredicted RBP3.52□□□□□ -1.85
NUP88-202ENST00000570937 CHRNA7P36544 502 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 ELK3P41970 407 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 SLC1A2P43004 574 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 RPL21P46778 160 aaKnown RBP3.52□□□□□ -1.85
NUP88-202ENST00000570937 LUMP51884 338 aaPredicted RBP3.52□□□□□ -1.85
NUP88-202ENST00000570937 PLTPP55058 493 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 CDH11P55287 796 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 GFERP55789 205 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 RPS15P62841 145 aaKnown RBP3.52□□□□□ -1.85
NUP88-202ENST00000570937 P2RY6Q15077 328 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 KYNUQ16719 465 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 CTSL3PQ5NE16 218 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 DUPD1Q68J44 220 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 DHRS7BQ6IAN0 325 aaPredicted RBP3.52□□□□□ -1.85
NUP88-202ENST00000570937 CNSTQ6PJW8 725 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 CORO6Q6QEF8 472 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 SPESP1Q6UW49 350 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 C3orf62Q6ZUJ4 267 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 SZRD1Q7Z422 152 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 SLC26A11Q86WA9 606 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 ZFAND4Q86XD8 727 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 TMEM126BQ8IUX1 230 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 CNTN4Q8IWV2 1026 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 KRT222Q8N1A0 295 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 C17orf53Q8N3J3 647 aaPredicted RBP3.52□□□□□ -1.85
NUP88-202ENST00000570937 ZNF611Q8N823 705 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 CEP112Q8N8E3 955 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 BMPERQ8N8U9 685 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 GPATCH11Q8N954 259 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 FBXO36Q8NEA4 188 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 OR5AR1Q8NGP9 310 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 OR2L8Q8NGY9 312 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 MOSPD2Q8NHP6 518 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 MCOLN3Q8TDD5 553 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 GRHL3Q8TE85 626 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 NAT14Q8WUY8 206 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 ATL1Q8WXF7 558 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 SMPDL3AQ92484 453 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 CERS2Q96G23 380 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 ELMO2Q96JJ3 720 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 GPR21Q99679 349 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 MAP3K3Q99759 626 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 CPNE1Q99829 537 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 CTRCQ99895 268 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 C17orf62Q9BQA9 187 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 BTBD10Q9BSF8 475 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 TRIM51Q9BSJ1 452 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 NLNQ9BYT8 704 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 PITPNM3Q9BZ71 974 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 VN1R1Q9GZP7 353 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 CHRNA10Q9GZZ6 450 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 PCBD2Q9H0N5 130 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 DPH5Q9H2P9 285 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 GHITMQ9H3K2 345 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 GPN2Q9H9Y4 310 aaPredicted RBP3.52□□□□□ -1.85
NUP88-202ENST00000570937 FBXO6Q9NRD1 293 aaPredicted RBP3.52□□□□□ -1.85
NUP88-202ENST00000570937 FGF21Q9NSA1 209 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 IARS2Q9NSE4 1012 aaKnown RBP3.52□□□□□ -1.85
NUP88-202ENST00000570937 ZDHHC18Q9NUE0 388 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 PSD3Q9NYI0 1048 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 SPATA7Q9P0W8 599 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 TMEM181Q9P2C4 612 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 OSGIN1Q9UJX0 560 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms