RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 KATNB1Q9BVA0 655 aa8.13□□□□□ -1.11
LINC00558-201ENST00000569422 UBQLN3Q9H347 655 aa8.13□□□□□ -1.11
LINC00558-201ENST00000569422 FAM60AQ9NP50 221 aa8.13□□□□□ -1.11
LINC00558-201ENST00000569422 PTGFRNQ9P2B2 879 aa8.13□□□□□ -1.11
LINC00558-201ENST00000569422 FBXL4Q9UKA2 621 aa8.13□□□□□ -1.11
LINC00558-201ENST00000569422 V9GYH0 126 aa8.13□□□□□ -1.11
LINC00558-201ENST00000569422 MUC22E2RYF6 1773 aaPredicted RBP8.13□□□□□ -1.11
LINC00558-201ENST00000569422 C12orf71A8MTZ7 269 aa8.12□□□□□ -1.11
LINC00558-201ENST00000569422 MAGEB4O15481 346 aaPredicted RBP8.12□□□□□ -1.11
LINC00558-201ENST00000569422 PTTG1O95997 202 aa8.12□□□□□ -1.11
LINC00558-201ENST00000569422 IL7P13232 177 aa8.12□□□□□ -1.11
LINC00558-201ENST00000569422 APEX1P27695 318 aaKnown RBP8.12□□□□□ -1.11
LINC00558-201ENST00000569422 PGDP52209 483 aa8.12□□□□□ -1.11
LINC00558-201ENST00000569422 GAS1P54826 345 aa8.12□□□□□ -1.11
LINC00558-201ENST00000569422 C3orf38Q5JPI3 329 aa8.12□□□□□ -1.11
LINC00558-201ENST00000569422 ZNF620Q6ZNG0 422 aa8.12□□□□□ -1.11
LINC00558-201ENST00000569422 RANBP3LQ86VV4 465 aaPredicted RBP8.12□□□□□ -1.11
LINC00558-201ENST00000569422 OR2L13Q8N349 312 aa8.12□□□□□ -1.11
LINC00558-201ENST00000569422 FANK1Q8TC84 345 aa8.12□□□□□ -1.11
LINC00558-201ENST00000569422 SLC25A46Q96AG3 418 aa8.12□□□□□ -1.11
LINC00558-201ENST00000569422 PRRG3Q9BZD7 231 aa8.12□□□□□ -1.11
LINC00558-201ENST00000569422 NLGN3Q9NZ94 848 aa8.12□□□□□ -1.11
LINC00558-201ENST00000569422 PLEKHB1Q9UF11 243 aaPredicted RBP8.12□□□□□ -1.11
LINC00558-201ENST00000569422 GSTK1Q9Y2Q3 226 aa8.12□□□□□ -1.11
LINC00558-201ENST00000569422 SLC22A7Q9Y694 548 aa8.12□□□□□ -1.11
LINC00558-201ENST00000569422 ARHGEF17Q96PE2 2063 aaPredicted RBP8.12□□□□□ -1.11
LINC00558-201ENST00000569422 ALPK3Q96L96 1907 aa8.12□□□□□ -1.11
LINC00558-201ENST00000569422 A0A0A6YYC8 382 aaPredicted RBP8.12□□□□□ -1.11
LINC00558-201ENST00000569422 A0A1W2PPK0 400 aa8.12□□□□□ -1.11
LINC00558-201ENST00000569422 I3L1I5 382 aaPredicted RBP8.12□□□□□ -1.11
LINC00558-201ENST00000569422 HRKO00198 91 aa8.12□□□□□ -1.11
LINC00558-201ENST00000569422 HPGDSO60760 199 aa8.12□□□□□ -1.11
LINC00558-201ENST00000569422 STX11O75558 287 aa8.12□□□□□ -1.11
LINC00558-201ENST00000569422 AKT2P31751 481 aa8.12□□□□□ -1.11
LINC00558-201ENST00000569422 ZNF136P52737 540 aa8.12□□□□□ -1.11
LINC00558-201ENST00000569422 COPZ1P61923 177 aa8.12□□□□□ -1.11
LINC00558-201ENST00000569422 EFNB1P98172 346 aa8.12□□□□□ -1.11
LINC00558-201ENST00000569422 DECR1Q16698 335 aa8.12□□□□□ -1.11
LINC00558-201ENST00000569422 NDUFAF6Q330K2 333 aa8.12□□□□□ -1.11
LINC00558-201ENST00000569422 PLK5Q496M5 336 aa8.12□□□□□ -1.11
LINC00558-201ENST00000569422 SLC6A19Q695T7 634 aa8.12□□□□□ -1.11
LINC00558-201ENST00000569422 THSD4Q6ZMP0 1018 aa8.12□□□□□ -1.11
LINC00558-201ENST00000569422 GLCCI1Q86VQ1 547 aa8.12□□□□□ -1.11
LINC00558-201ENST00000569422 ATP6V1C2Q8NEY4 427 aa8.12□□□□□ -1.11
LINC00558-201ENST00000569422 OR52R1Q8NGF1 315 aa8.12□□□□□ -1.11
LINC00558-201ENST00000569422 LILRB4Q8NHJ6 448 aa8.12□□□□□ -1.11
LINC00558-201ENST00000569422 FLVCR1-AS1Q8TAF5 88 aa8.12□□□□□ -1.11
LINC00558-201ENST00000569422 TMEM239Q8WW34 195 aa8.12□□□□□ -1.11
LINC00558-201ENST00000569422 RFKQ969G6 155 aa8.12□□□□□ -1.11
LINC00558-201ENST00000569422 MRPL38Q96DV4 380 aaKnown RBP8.12□□□□□ -1.11
LINC00558-201ENST00000569422 CD180Q99467 661 aa8.12□□□□□ -1.11
LINC00558-201ENST00000569422 SARGQ9BW04 601 aa8.12□□□□□ -1.11
LINC00558-201ENST00000569422 MIXL1Q9H2W2 232 aa8.12□□□□□ -1.11
LINC00558-201ENST00000569422 SIAEQ9HAT2 523 aa8.12□□□□□ -1.11
LINC00558-201ENST00000569422 SIDT1Q9NXL6 827 aaKnown RBP8.12□□□□□ -1.11
LINC00558-201ENST00000569422 CD207Q9UJ71 328 aa8.12□□□□□ -1.11
LINC00558-201ENST00000569422 SPACA6W5XKT8 324 aa8.12□□□□□ -1.11
LINC00558-201ENST00000569422 A0A075B6Q4 140 aa8.12□□□□□ -1.11
LINC00558-201ENST00000569422 LRRN3E7EW58 273 aa8.12□□□□□ -1.11
LINC00558-201ENST00000569422 ZGLP1P0C6A0 271 aa8.12□□□□□ -1.11
LINC00558-201ENST00000569422 ST6GAL1P15907 406 aa8.12□□□□□ -1.11
LINC00558-201ENST00000569422 ZNF10P21506 573 aaPredicted RBP8.12□□□□□ -1.11
LINC00558-201ENST00000569422 FPR3P25089 353 aa8.12□□□□□ -1.11
LINC00558-201ENST00000569422 STAT5AP42229 794 aa8.12□□□□□ -1.11
LINC00558-201ENST00000569422 CASP3P42574 277 aa8.12□□□□□ -1.11
LINC00558-201ENST00000569422 TSFMP43897 325 aaKnown RBP8.12□□□□□ -1.11
LINC00558-201ENST00000569422 HCCSP53701 268 aa8.12□□□□□ -1.11
LINC00558-201ENST00000569422 CDC20Q12834 499 aa8.12□□□□□ -1.11
LINC00558-201ENST00000569422 ARHGAP11BQ3KRB8 267 aa8.12□□□□□ -1.11
LINC00558-201ENST00000569422 GXYLT1Q4G148 440 aa8.12□□□□□ -1.11
LINC00558-201ENST00000569422 FAM27D1Q5T7N8 215 aa8.12□□□□□ -1.11
LINC00558-201ENST00000569422 IL20RBQ6UXL0 311 aa8.12□□□□□ -1.11
LINC00558-201ENST00000569422 Q6ZS52 159 aa8.12□□□□□ -1.11
LINC00558-201ENST00000569422 SLC51BQ86UW2 128 aa8.12□□□□□ -1.11
LINC00558-201ENST00000569422 SLC22A18ASQ8N1D0 253 aa8.12□□□□□ -1.11
LINC00558-201ENST00000569422 KLHL36Q8N4N3 616 aa8.12□□□□□ -1.11
LINC00558-201ENST00000569422 TMEM99Q8N816 258 aa8.12□□□□□ -1.11
LINC00558-201ENST00000569422 AVL9Q8NBF6 648 aa8.12□□□□□ -1.11
LINC00558-201ENST00000569422 OR52L1Q8NGH7 329 aa8.12□□□□□ -1.11
LINC00558-201ENST00000569422 NEIL3Q8TAT5 605 aa8.12□□□□□ -1.11
LINC00558-201ENST00000569422 UBASH3BQ8TF42 649 aa8.12□□□□□ -1.11
LINC00558-201ENST00000569422 CNOT9Q92600 299 aaKnown RBP8.12□□□□□ -1.11
LINC00558-201ENST00000569422 PEX11GQ96HA9 241 aa8.12□□□□□ -1.11
LINC00558-201ENST00000569422 LMAN2LQ9H0V9 348 aa8.12□□□□□ -1.11
LINC00558-201ENST00000569422 LRRN3Q9H3W5 708 aa8.12□□□□□ -1.11
LINC00558-201ENST00000569422 NKIRAS2Q9NYR9 191 aa8.12□□□□□ -1.11
LINC00558-201ENST00000569422 CBLCQ9ULV8 474 aa8.12□□□□□ -1.11
LINC00558-201ENST00000569422 UGT2A1Q9Y4X1 527 aa8.12□□□□□ -1.11
LINC00558-201ENST00000569422 SHISA3A0PJX4 238 aa8.11□□□□□ -1.11
LINC00558-201ENST00000569422 UNC119BA6NIH7 251 aa8.11□□□□□ -1.11
LINC00558-201ENST00000569422 C2orf74A8MZ97 194 aa8.11□□□□□ -1.11
LINC00558-201ENST00000569422 FAM25AB3EWG3 89 aa8.11□□□□□ -1.11
LINC00558-201ENST00000569422 FAM25CB3EWG5 89 aa8.11□□□□□ -1.11
LINC00558-201ENST00000569422 FAM25GB3EWG6 89 aa8.11□□□□□ -1.11
LINC00558-201ENST00000569422 SEMA4FO95754 770 aa8.11□□□□□ -1.11
LINC00558-201ENST00000569422 GABRG2P18507 467 aa8.11□□□□□ -1.11
LINC00558-201ENST00000569422 KIAA1024LP59773 190 aa8.11□□□□□ -1.11
LINC00558-201ENST00000569422 SLC3A1Q07837 685 aa8.11□□□□□ -1.11
LINC00558-201ENST00000569422 IL18Q14116 193 aa8.11□□□□□ -1.11
LINC00558-201ENST00000569422 ODF1Q14990 250 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms