RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 TMEM173Q86WV6 379 aaPredicted RBP10.18□□□□□ -0.78
PALB2-206ENST00000568219 ADGRG3Q86Y34 549 aa10.18□□□□□ -0.78
PALB2-206ENST00000568219 GTPBP8Q8N3Z3 284 aaPredicted RBP10.18□□□□□ -0.78
PALB2-206ENST00000568219 OR2T4Q8NH00 348 aa10.18□□□□□ -0.78
PALB2-206ENST00000568219 NANPQ8TBE9 248 aa10.18□□□□□ -0.78
PALB2-206ENST00000568219 SLC6A18Q96N87 628 aa10.18□□□□□ -0.78
PALB2-206ENST00000568219 SORCS2Q96PQ0 1159 aa10.18□□□□□ -0.78
PALB2-206ENST00000568219 SLC38A3Q99624 504 aa10.18□□□□□ -0.78
PALB2-206ENST00000568219 SYT17Q9BSW7 474 aa10.18□□□□□ -0.78
PALB2-206ENST00000568219 SCPEP1Q9HB40 452 aa10.18□□□□□ -0.78
PALB2-206ENST00000568219 ZNF304Q9HCX3 659 aa10.18□□□□□ -0.78
PALB2-206ENST00000568219 SEMA4GQ9NTN9 838 aa10.18□□□□□ -0.78
PALB2-206ENST00000568219 PRAMEF2O60811 474 aa10.18□□□□□ -0.78
PALB2-206ENST00000568219 EGFP01133 1207 aa10.18□□□□□ -0.78
PALB2-206ENST00000568219 ZNF14P17017 642 aaPredicted RBP10.18□□□□□ -0.78
PALB2-206ENST00000568219 DCTDP32321 178 aa10.18□□□□□ -0.78
PALB2-206ENST00000568219 TAS2R38P59533 333 aa10.18□□□□□ -0.78
PALB2-206ENST00000568219 BIKQ13323 160 aa10.18□□□□□ -0.78
PALB2-206ENST00000568219 GSG1Q2KHT4 349 aa10.18□□□□□ -0.78
PALB2-206ENST00000568219 ZXDCQ2QGD7 858 aaPredicted RBP10.18□□□□□ -0.78
PALB2-206ENST00000568219 C12orf73Q69YU5 71 aa10.18□□□□□ -0.78
PALB2-206ENST00000568219 MEPCEQ7L2J0 689 aaKnown RBP10.18□□□□□ -0.78
PALB2-206ENST00000568219 METTL3Q86U44 580 aaKnown RBP10.18□□□□□ -0.78
PALB2-206ENST00000568219 OR10G6Q8NH81 332 aa10.18□□□□□ -0.78
PALB2-206ENST00000568219 BRIX1Q8TDN6 353 aaKnown RBP10.18□□□□□ -0.78
PALB2-206ENST00000568219 ELP4Q96EB1 424 aa10.18□□□□□ -0.78
PALB2-206ENST00000568219 NRTNQ99748 197 aa10.18□□□□□ -0.78
PALB2-206ENST00000568219 UBQLN3Q9H347 655 aa10.18□□□□□ -0.78
PALB2-206ENST00000568219 NIT2Q9NQR4 276 aa10.18□□□□□ -0.78
PALB2-206ENST00000568219 ZSCAN32Q9NX65 697 aa10.18□□□□□ -0.78
PALB2-206ENST00000568219 GSKIPQ9P0R6 139 aa10.18□□□□□ -0.78
PALB2-206ENST00000568219 CPNE7Q9UBL6 633 aa10.18□□□□□ -0.78
PALB2-206ENST00000568219 GMEB2Q9UKD1 530 aa10.18□□□□□ -0.78
PALB2-206ENST00000568219 D6RAR5 112 aa10.17□□□□□ -0.78
PALB2-206ENST00000568219 FADS1O60427 444 aa10.17□□□□□ -0.78
PALB2-206ENST00000568219 F11P03951 625 aa10.17□□□□□ -0.78
PALB2-206ENST00000568219 C1SP09871 688 aa10.17□□□□□ -0.78
PALB2-206ENST00000568219 TAS2R43P59537 309 aa10.17□□□□□ -0.78
PALB2-206ENST00000568219 GPR85P60893 370 aa10.17□□□□□ -0.78
PALB2-206ENST00000568219 AIMP2Q13155 320 aaKnown RBP10.17□□□□□ -0.78
PALB2-206ENST00000568219 MELKQ14680 651 aa10.17□□□□□ -0.78
PALB2-206ENST00000568219 NNATQ16517 81 aa10.17□□□□□ -0.78
PALB2-206ENST00000568219 CBARPQ8N350 705 aaPredicted RBP10.17□□□□□ -0.78
PALB2-206ENST00000568219 C12orf45Q8N5I9 185 aaPredicted RBP10.17□□□□□ -0.78
PALB2-206ENST00000568219 SIRT6Q8N6T7 355 aa10.17□□□□□ -0.78
PALB2-206ENST00000568219 PXT1Q8NFP0 134 aa10.17□□□□□ -0.78
PALB2-206ENST00000568219 OR13C2Q8NGS9 318 aa10.17□□□□□ -0.78
PALB2-206ENST00000568219 OR9A2Q8NGT5 310 aa10.17□□□□□ -0.78
PALB2-206ENST00000568219 LGR4Q9BXB1 951 aa10.17□□□□□ -0.78
PALB2-206ENST00000568219 CALML5Q9NZT1 146 aa10.17□□□□□ -0.78
PALB2-206ENST00000568219 ZNF638Q14966 1978 aaKnown RBP10.17□□□□□ -0.78
PALB2-206ENST00000568219 PIKFYVEQ9Y2I7 2098 aa10.17□□□□□ -0.78
PALB2-206ENST00000568219 KCNE1BA0A087WTH5 132 aa10.17□□□□□ -0.78
PALB2-206ENST00000568219 RAB19A4D1S5 217 aa10.17□□□□□ -0.78
PALB2-206ENST00000568219 ANTXRLA6NF34 631 aa10.17□□□□□ -0.78
PALB2-206ENST00000568219 PRKAR2AP13861 404 aaKnown RBP10.17□□□□□ -0.78
PALB2-206ENST00000568219 PPP3CBP16298 524 aa10.17□□□□□ -0.78
PALB2-206ENST00000568219 TLX1P31314 330 aaPredicted RBP10.17□□□□□ -0.78
PALB2-206ENST00000568219 CRMP1Q14194 572 aa10.17□□□□□ -0.78
PALB2-206ENST00000568219 FAM76BQ5HYJ3 339 aa10.17□□□□□ -0.78
PALB2-206ENST00000568219 TMEM25Q86YD3 366 aa10.17□□□□□ -0.78
PALB2-206ENST00000568219 SCARB1Q8WTV0 552 aa10.17□□□□□ -0.78
PALB2-206ENST00000568219 ACOT11Q8WXI4 607 aaPredicted RBP10.17□□□□□ -0.78
PALB2-206ENST00000568219 SCLYQ96I15 445 aa10.17□□□□□ -0.78
PALB2-206ENST00000568219 NKX3-1Q99801 234 aaPredicted RBP10.17□□□□□ -0.78
PALB2-206ENST00000568219 PELOQ9BRX2 385 aaKnown RBP10.17□□□□□ -0.78
PALB2-206ENST00000568219 MED18Q9BUE0 208 aa10.17□□□□□ -0.78
PALB2-206ENST00000568219 ZNF350Q9GZX5 532 aa10.17□□□□□ -0.78
PALB2-206ENST00000568219 ATG5Q9H1Y0 275 aa10.17□□□□□ -0.78
PALB2-206ENST00000568219 LSM2Q9Y333 95 aaKnown RBP10.17□□□□□ -0.78
PALB2-206ENST00000568219 PCDHGA9Q9Y5G4 932 aaKnown RBP10.17□□□□□ -0.78
PALB2-206ENST00000568219 PHIPQ8WWQ0 1821 aa10.17□□□□□ -0.78
PALB2-206ENST00000568219 SHISA3A0PJX4 238 aa10.17□□□□□ -0.78
PALB2-206ENST00000568219 GRXCR1A8MXD5 290 aa10.17□□□□□ -0.78
PALB2-206ENST00000568219 GFYI3L273 518 aa10.17□□□□□ -0.78
PALB2-206ENST00000568219 OR10H2O60403 315 aa10.17□□□□□ -0.78
PALB2-206ENST00000568219 GALTP07902 379 aa10.17□□□□□ -0.78
PALB2-206ENST00000568219 ADRB1P08588 477 aa10.17□□□□□ -0.78
PALB2-206ENST00000568219 HMGA2P52926 109 aa10.17□□□□□ -0.78
PALB2-206ENST00000568219 LRFN4Q6PJG9 635 aa10.17□□□□□ -0.78
PALB2-206ENST00000568219 TMEM91Q6ZNR0 172 aa10.17□□□□□ -0.78
PALB2-206ENST00000568219 DNAAF1Q8NEP3 725 aa10.17□□□□□ -0.78
PALB2-206ENST00000568219 MARC2Q969Z3 335 aa10.17□□□□□ -0.78
PALB2-206ENST00000568219 NEURL3Q96EH8 262 aa10.17□□□□□ -0.78
PALB2-206ENST00000568219 NKX6-2Q9C056 277 aaPredicted RBP10.17□□□□□ -0.78
PALB2-206ENST00000568219 LIN7BQ9HAP6 207 aa10.17□□□□□ -0.78
PALB2-206ENST00000568219 ZFP64Q9NPA5 681 aa10.17□□□□□ -0.78
PALB2-206ENST00000568219 NOX4Q9NPH5 578 aa10.17□□□□□ -0.78
PALB2-206ENST00000568219 PRMT8Q9NR22 394 aaPredicted RBP10.17□□□□□ -0.78
PALB2-206ENST00000568219 KCNK6Q9Y257 313 aa10.17□□□□□ -0.78
PALB2-206ENST00000568219 PRSS44E7EML9 344 aa10.16□□□□□ -0.78
PALB2-206ENST00000568219 CCSO14618 274 aa10.16□□□□□ -0.78
PALB2-206ENST00000568219 FCMRO60667 390 aa10.16□□□□□ -0.78
PALB2-206ENST00000568219 PRAF2O60831 178 aa10.16□□□□□ -0.78
PALB2-206ENST00000568219 C1orf105O95561 183 aa10.16□□□□□ -0.78
PALB2-206ENST00000568219 HTR2AP28223 471 aa10.16□□□□□ -0.78
PALB2-206ENST00000568219 FGF9P31371 208 aaPredicted RBP10.16□□□□□ -0.78
PALB2-206ENST00000568219 KLHL26Q53HC5 615 aa10.16□□□□□ -0.78
PALB2-206ENST00000568219 STPG2Q8N412 459 aa10.16□□□□□ -0.78
PALB2-206ENST00000568219 JAGN1Q8N5M9 183 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms