RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 DEFA1P59665 94 aa17.27■□□□□ 0.35
MSLN-207ENST00000566549 DEFA3P59666 94 aa17.27■□□□□ 0.35
MSLN-207ENST00000566549 CRYZQ08257 329 aaKnown RBP17.27■□□□□ 0.35
MSLN-207ENST00000566549 ELOCQ15369 112 aa17.27■□□□□ 0.35
MSLN-207ENST00000566549 CCDC85BQ15834 202 aaPredicted RBP17.27■□□□□ 0.35
MSLN-207ENST00000566549 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.27■□□□□ 0.35
MSLN-207ENST00000566549 PRPF38BQ5VTL8 546 aaKnown RBP17.27■□□□□ 0.35
MSLN-207ENST00000566549 FAM131AQ6UXB0 335 aa17.27■□□□□ 0.35
MSLN-207ENST00000566549 MEPCEQ7L2J0 689 aaKnown RBP17.27■□□□□ 0.35
MSLN-207ENST00000566549 LNX2Q8N448 690 aa17.27■□□□□ 0.35
MSLN-207ENST00000566549 CELF2-AS1Q8N7Q2 184 aa17.27■□□□□ 0.35
MSLN-207ENST00000566549 SLC37A3Q8NCC5 494 aa17.27■□□□□ 0.35
MSLN-207ENST00000566549 TNFRSF13CQ96RJ3 184 aa17.27■□□□□ 0.35
MSLN-207ENST00000566549 LMF2Q9BU23 707 aaKnown RBP17.27■□□□□ 0.35
MSLN-207ENST00000566549 LRIT1Q9P2V4 623 aa17.27■□□□□ 0.35
MSLN-207ENST00000566549 GSTK1Q9Y2Q3 226 aa17.27■□□□□ 0.35
MSLN-207ENST00000566549 OR10H1Q9Y4A9 318 aa17.27■□□□□ 0.35
MSLN-207ENST00000566549 IGHV5-51A0A0C4DH38 117 aa17.26■□□□□ 0.35
MSLN-207ENST00000566549 CHP2O43745 196 aa17.26■□□□□ 0.35
MSLN-207ENST00000566549 CTNSO60931 367 aa17.26■□□□□ 0.35
MSLN-207ENST00000566549 CD38P28907 300 aa17.26■□□□□ 0.35
MSLN-207ENST00000566549 ACAA2P42765 397 aaKnown RBP17.26■□□□□ 0.35
MSLN-207ENST00000566549 FZD5Q13467 585 aa17.26■□□□□ 0.35
MSLN-207ENST00000566549 KCNAB1Q14722 419 aa17.26■□□□□ 0.35
MSLN-207ENST00000566549 TAB1Q15750 504 aa17.26■□□□□ 0.35
MSLN-207ENST00000566549 ZNF613Q6PF04 617 aa17.26■□□□□ 0.35
MSLN-207ENST00000566549 TMPRSS11FQ6ZWK6 438 aa17.26■□□□□ 0.35
MSLN-207ENST00000566549 OAFQ86UD1 273 aa17.26■□□□□ 0.35
MSLN-207ENST00000566549 MARCH9Q86YJ5 346 aa17.26■□□□□ 0.35
MSLN-207ENST00000566549 GID4Q8IVV7 300 aa17.26■□□□□ 0.35
MSLN-207ENST00000566549 ATP6V1C2Q8NEY4 427 aa17.26■□□□□ 0.35
MSLN-207ENST00000566549 PTP4A1Q93096 173 aa17.26■□□□□ 0.35
MSLN-207ENST00000566549 TCTN2Q96GX1 697 aa17.26■□□□□ 0.35
MSLN-207ENST00000566549 ISYNA1Q9NPH2 558 aa17.26■□□□□ 0.35
MSLN-207ENST00000566549 TBC1D24Q9ULP9 559 aa17.26■□□□□ 0.35
MSLN-207ENST00000566549 SLC35F4A4IF30 521 aa17.26■□□□□ 0.35
MSLN-207ENST00000566549 FAM86C2PA6NEL3 165 aa17.26■□□□□ 0.35
MSLN-207ENST00000566549 LRRN3E7EW58 273 aa17.26■□□□□ 0.35
MSLN-207ENST00000566549 PRR23D1E9PI22 279 aaPredicted RBP17.26■□□□□ 0.35
MSLN-207ENST00000566549 SNPHO15079 494 aa17.26■□□□□ 0.35
MSLN-207ENST00000566549 PRR23D2P0DMB1 279 aaPredicted RBP17.26■□□□□ 0.35
MSLN-207ENST00000566549 COL19A1Q14993 1142 aa17.26■□□□□ 0.35
MSLN-207ENST00000566549 UBXN2BQ14CS0 331 aa17.26■□□□□ 0.35
MSLN-207ENST00000566549 VASNQ6EMK4 673 aa17.26■□□□□ 0.35
MSLN-207ENST00000566549 C16orf52Q8NHV5 167 aa17.26■□□□□ 0.35
MSLN-207ENST00000566549 DIRAS2Q96HU8 199 aa17.26■□□□□ 0.35
MSLN-207ENST00000566549 ABHD8Q96I13 439 aa17.26■□□□□ 0.35
MSLN-207ENST00000566549 LMF1Q96S06 567 aa17.26■□□□□ 0.35
MSLN-207ENST00000566549 CCDC32Q9BV29 185 aa17.26■□□□□ 0.35
MSLN-207ENST00000566549 ALG8Q9BVK2 526 aa17.26■□□□□ 0.35
MSLN-207ENST00000566549 YIPF2Q9BWQ6 316 aa17.26■□□□□ 0.35
MSLN-207ENST00000566549 SPRTNQ9H040 489 aaPredicted RBP17.26■□□□□ 0.35
MSLN-207ENST00000566549 LRRN3Q9H3W5 708 aa17.26■□□□□ 0.35
MSLN-207ENST00000566549 POLE3Q9NRF9 147 aa17.26■□□□□ 0.35
MSLN-207ENST00000566549 C14orf105Q9NVL8 296 aa17.26■□□□□ 0.35
MSLN-207ENST00000566549 COMMD3Q9UBI1 195 aa17.26■□□□□ 0.35
MSLN-207ENST00000566549 CLDN16Q9Y5I7 305 aa17.26■□□□□ 0.35
MSLN-207ENST00000566549 SHISA3A0PJX4 238 aa17.25■□□□□ 0.35
MSLN-207ENST00000566549 MBTPS2O43462 519 aa17.25■□□□□ 0.35
MSLN-207ENST00000566549 SRPX2O60687 465 aaPredicted RBP17.25■□□□□ 0.35
MSLN-207ENST00000566549 SRFP11831 508 aa17.25■□□□□ 0.35
MSLN-207ENST00000566549 TPTEP56180 551 aa17.25■□□□□ 0.35
MSLN-207ENST00000566549 CBX3Q13185 183 aa17.25■□□□□ 0.35
MSLN-207ENST00000566549 CRMP1Q14194 572 aa17.25■□□□□ 0.35
MSLN-207ENST00000566549 GATSQ8NAP1 163 aa17.25■□□□□ 0.35
MSLN-207ENST00000566549 OR4C3Q8NH37 302 aa17.25■□□□□ 0.35
MSLN-207ENST00000566549 KISS1RQ969F8 398 aaPredicted RBP17.25■□□□□ 0.35
MSLN-207ENST00000566549 TTTY10Q9BZA0 68 aa17.25■□□□□ 0.35
MSLN-207ENST00000566549 TTYH1Q9H313 450 aaPredicted RBP17.25■□□□□ 0.35
MSLN-207ENST00000566549 Q9N2J8 555 aa17.25■□□□□ 0.35
MSLN-207ENST00000566549 CMC2Q9NRP2 79 aa17.25■□□□□ 0.35
MSLN-207ENST00000566549 TMEM5Q9Y2B1 443 aa17.25■□□□□ 0.35
MSLN-207ENST00000566549 GABRPO00591 440 aa17.25■□□□□ 0.35
MSLN-207ENST00000566549 CLDN4O14493 209 aa17.25■□□□□ 0.35
MSLN-207ENST00000566549 KIRREL2Q6UWL6 708 aa17.25■□□□□ 0.35
MSLN-207ENST00000566549 ACBD7Q8N6N7 88 aa17.25■□□□□ 0.35
MSLN-207ENST00000566549 NEIL3Q8TAT5 605 aa17.25■□□□□ 0.35
MSLN-207ENST00000566549 HOXB13Q92826 284 aaPredicted RBP17.25■□□□□ 0.35
MSLN-207ENST00000566549 RNF31Q96EP0 1072 aa17.25■□□□□ 0.35
MSLN-207ENST00000566549 OR10A5Q9H207 317 aa17.25■□□□□ 0.35
MSLN-207ENST00000566549 SIAEQ9HAT2 523 aa17.25■□□□□ 0.35
MSLN-207ENST00000566549 SIRT4Q9Y6E7 314 aaPredicted RBP17.25■□□□□ 0.35
MSLN-207ENST00000566549 DAPL1A0PJW8 107 aa17.24■□□□□ 0.35
MSLN-207ENST00000566549 J3QRE1 110 aa17.24■□□□□ 0.35
MSLN-207ENST00000566549 APOA1P02647 267 aa17.24■□□□□ 0.35
MSLN-207ENST00000566549 CT45A8P0DMV1 189 aa17.24■□□□□ 0.35
MSLN-207ENST00000566549 CT45A9P0DMV2 189 aa17.24■□□□□ 0.35
MSLN-207ENST00000566549 IL9P15248 144 aa17.24■□□□□ 0.35
MSLN-207ENST00000566549 NME1P15531 152 aaKnown RBP17.24■□□□□ 0.35
MSLN-207ENST00000566549 FASLGP48023 281 aa17.24■□□□□ 0.35
MSLN-207ENST00000566549 DAB2P98082 770 aa17.24■□□□□ 0.35
MSLN-207ENST00000566549 CT45A2Q5DJT8 189 aa17.24■□□□□ 0.35
MSLN-207ENST00000566549 GKN2Q86XP6 184 aa17.24■□□□□ 0.35
MSLN-207ENST00000566549 ZNF595Q8IYB9 648 aa17.24■□□□□ 0.35
MSLN-207ENST00000566549 GHDCQ8N2G8 530 aa17.24■□□□□ 0.35
MSLN-207ENST00000566549 ARIH2OSQ8N7S6 290 aa17.24■□□□□ 0.35
MSLN-207ENST00000566549 OR52N1Q8NH53 320 aa17.24■□□□□ 0.35
MSLN-207ENST00000566549 OR51Q1Q8NH59 317 aa17.24■□□□□ 0.35
MSLN-207ENST00000566549 OR4C6Q8NH72 309 aa17.24■□□□□ 0.35
MSLN-207ENST00000566549 EFHD2Q96C19 240 aaPredicted RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms