RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 ECI2O75521 394 aa3.93□□□□□ -1.78
CNOT1-209ENST00000566240 UGT2B17O75795 530 aa3.93□□□□□ -1.78
CNOT1-209ENST00000566240 NCF2P19878 526 aaPredicted RBP3.93□□□□□ -1.78
CNOT1-209ENST00000566240 CYP2B6P20813 491 aa3.93□□□□□ -1.78
CNOT1-209ENST00000566240 IMPDH1P20839 514 aa3.93□□□□□ -1.78
CNOT1-209ENST00000566240 NF2P35240 595 aa3.93□□□□□ -1.78
CNOT1-209ENST00000566240 RPL34P49207 117 aaKnown RBP3.93□□□□□ -1.78
CNOT1-209ENST00000566240 OC90Q02509 493 aaPredicted RBP3.93□□□□□ -1.78
CNOT1-209ENST00000566240 DPYSL2Q16555 572 aa3.93□□□□□ -1.78
CNOT1-209ENST00000566240 KIF26BQ2KJY2 2108 aa3.93□□□□□ -1.78
CNOT1-209ENST00000566240 CFAP221Q4G0U5 840 aa3.93□□□□□ -1.78
CNOT1-209ENST00000566240 PDZK1Q5T2W1 519 aa3.93□□□□□ -1.78
CNOT1-209ENST00000566240 TPGS2Q68CL5 300 aa3.93□□□□□ -1.78
CNOT1-209ENST00000566240 TRPM8Q7Z2W7 1104 aa3.93□□□□□ -1.78
CNOT1-209ENST00000566240 NANOGNBQ7Z5D8 188 aa3.93□□□□□ -1.78
CNOT1-209ENST00000566240 TPRA1Q86W33 373 aa3.93□□□□□ -1.78
CNOT1-209ENST00000566240 KRTAP7-1Q8IUC3 87 aa3.93□□□□□ -1.78
CNOT1-209ENST00000566240 C9orf40Q8IXQ3 194 aa3.93□□□□□ -1.78
CNOT1-209ENST00000566240 AKR7LQ8NHP1 331 aa3.93□□□□□ -1.78
CNOT1-209ENST00000566240 VN1R17PQ8TDU5 208 aa3.93□□□□□ -1.78
CNOT1-209ENST00000566240 ARNTL2Q8WYA1 636 aa3.93□□□□□ -1.78
CNOT1-209ENST00000566240 TOMM40LQ969M1 308 aa3.93□□□□□ -1.78
CNOT1-209ENST00000566240 NIPSNAP3BQ9BS92 247 aa3.93□□□□□ -1.78
CNOT1-209ENST00000566240 SPATA16Q9BXB7 569 aa3.93□□□□□ -1.78
CNOT1-209ENST00000566240 PARD6BQ9BYG5 372 aa3.93□□□□□ -1.78
CNOT1-209ENST00000566240 PKIBQ9C010 78 aa3.93□□□□□ -1.78
CNOT1-209ENST00000566240 ELOVL4Q9GZR5 314 aa3.93□□□□□ -1.78
CNOT1-209ENST00000566240 GLT8D2Q9H1C3 349 aa3.93□□□□□ -1.78
CNOT1-209ENST00000566240 VPS33BQ9H267 617 aa3.93□□□□□ -1.78
CNOT1-209ENST00000566240 METTL7AQ9H8H3 244 aa3.93□□□□□ -1.78
CNOT1-209ENST00000566240 MCCC2Q9HCC0 563 aa3.93□□□□□ -1.78
CNOT1-209ENST00000566240 POLE4Q9NR33 117 aa3.93□□□□□ -1.78
CNOT1-209ENST00000566240 PAK1IP1Q9NWT1 392 aaPredicted RBP3.93□□□□□ -1.78
CNOT1-209ENST00000566240 PIGLQ9Y2B2 252 aa3.93□□□□□ -1.78
CNOT1-209ENST00000566240 AK6Q9Y3D8 172 aaKnown RBP3.93□□□□□ -1.78
CNOT1-209ENST00000566240 CLIP1P30622 1438 aa3.93□□□□□ -1.78
CNOT1-209ENST00000566240 EFCAB5A4FU69 1503 aa3.92□□□□□ -1.78
CNOT1-209ENST00000566240 ABCA10Q8WWZ4 1543 aa3.92□□□□□ -1.78
CNOT1-209ENST00000566240 ARHGEF35A5YM69 484 aa3.92□□□□□ -1.78
CNOT1-209ENST00000566240 FAM47DPA6NHR8 397 aa3.92□□□□□ -1.78
CNOT1-209ENST00000566240 PP2D1A8MPX8 630 aa3.92□□□□□ -1.78
CNOT1-209ENST00000566240 KRTAP16-1A8MUX0 517 aa3.92□□□□□ -1.78
CNOT1-209ENST00000566240 A8MX80 341 aa3.92□□□□□ -1.78
CNOT1-209ENST00000566240 FOXE1O00358 373 aaPredicted RBP3.92□□□□□ -1.78
CNOT1-209ENST00000566240 NBR2O15453 112 aa3.92□□□□□ -1.78
CNOT1-209ENST00000566240 ZNF264O43296 627 aa3.92□□□□□ -1.78
CNOT1-209ENST00000566240 PI15O43692 258 aa3.92□□□□□ -1.78
CNOT1-209ENST00000566240 TIMM8AO60220 97 aaPredicted RBP3.92□□□□□ -1.78
CNOT1-209ENST00000566240 ZNF253O75346 499 aa3.92□□□□□ -1.78
CNOT1-209ENST00000566240 SCRG1O75711 98 aa3.92□□□□□ -1.78
CNOT1-209ENST00000566240 RHBDL1O75783 438 aa3.92□□□□□ -1.78
CNOT1-209ENST00000566240 ZNF883P0CG24 379 aa3.92□□□□□ -1.78
CNOT1-209ENST00000566240 MX1P20591 662 aa3.92□□□□□ -1.78
CNOT1-209ENST00000566240 BCL3P20749 454 aa3.92□□□□□ -1.78
CNOT1-209ENST00000566240 MT3P25713 68 aa3.92□□□□□ -1.78
CNOT1-209ENST00000566240 CD80P33681 288 aa3.92□□□□□ -1.78
CNOT1-209ENST00000566240 TDO2P48775 406 aa3.92□□□□□ -1.78
CNOT1-209ENST00000566240 EFNB2P52799 333 aa3.92□□□□□ -1.78
CNOT1-209ENST00000566240 IST1P53990 364 aa3.92□□□□□ -1.78
CNOT1-209ENST00000566240 SEC61GP60059 68 aa3.92□□□□□ -1.78
CNOT1-209ENST00000566240 KRTAP10-6P60371 365 aaPredicted RBP3.92□□□□□ -1.78
CNOT1-209ENST00000566240 BEX3Q00994 111 aa3.92□□□□□ -1.78
CNOT1-209ENST00000566240 PAX2Q02962 417 aa3.92□□□□□ -1.78
CNOT1-209ENST00000566240 CUL1Q13616 776 aa3.92□□□□□ -1.78
CNOT1-209ENST00000566240 SLC22A6Q4U2R8 563 aa3.92□□□□□ -1.78
CNOT1-209ENST00000566240 FAM199XQ6PEV8 388 aaPredicted RBP3.92□□□□□ -1.78
CNOT1-209ENST00000566240 VITQ6UXI7 678 aa3.92□□□□□ -1.78
CNOT1-209ENST00000566240 RUFY3Q7L099 469 aa3.92□□□□□ -1.78
CNOT1-209ENST00000566240 UBE2J2Q8N2K1 259 aa3.92□□□□□ -1.78
CNOT1-209ENST00000566240 MTURNQ8N3F0 131 aa3.92□□□□□ -1.78
CNOT1-209ENST00000566240 MFSD9Q8NBP5 474 aa3.92□□□□□ -1.78
CNOT1-209ENST00000566240 MAIP1Q8WWC4 291 aa3.92□□□□□ -1.78
CNOT1-209ENST00000566240 CELF6Q96J87 481 aaKnown RBP3.92□□□□□ -1.78
CNOT1-209ENST00000566240 SLC38A2Q96QD8 506 aa3.92□□□□□ -1.78
CNOT1-209ENST00000566240 CYP2S1Q96SQ9 504 aa3.92□□□□□ -1.78
CNOT1-209ENST00000566240 RHBGQ9H310 441 aa3.92□□□□□ -1.78
CNOT1-209ENST00000566240 CAB39LQ9H9S4 337 aa3.92□□□□□ -1.78
CNOT1-209ENST00000566240 ETNK2Q9NVF9 386 aa3.92□□□□□ -1.78
CNOT1-209ENST00000566240 ZNF581Q9P0T4 197 aa3.92□□□□□ -1.78
CNOT1-209ENST00000566240 ONECUT1Q9UBC0 465 aa3.92□□□□□ -1.78
CNOT1-209ENST00000566240 SEC14L3Q9UDX4 400 aa3.92□□□□□ -1.78
CNOT1-209ENST00000566240 ERCC6Q03468 1493 aa3.92□□□□□ -1.78
CNOT1-209ENST00000566240 MRC2Q9UBG0 1479 aa3.92□□□□□ -1.78
CNOT1-209ENST00000566240 RAPGEF2Q9Y4G8 1499 aa3.92□□□□□ -1.78
CNOT1-209ENST00000566240 ABCA5Q8WWZ7 1642 aa3.92□□□□□ -1.78
CNOT1-209ENST00000566240 RPAP1Q9BWH6 1393 aaPredicted RBP3.91□□□□□ -1.78
CNOT1-209ENST00000566240 CTAGE15A4D2H0 777 aa3.91□□□□□ -1.78
CNOT1-209ENST00000566240 OR52A4PA6NMU1 304 aa3.91□□□□□ -1.78
CNOT1-209ENST00000566240 TSPAN12O95859 305 aa3.91□□□□□ -1.78
CNOT1-209ENST00000566240 CCDC130P13994 396 aa3.91□□□□□ -1.78
CNOT1-209ENST00000566240 POLR2EP19388 210 aaKnown RBP3.91□□□□□ -1.78
CNOT1-209ENST00000566240 IGHV1-2P23083 117 aa3.91□□□□□ -1.78
CNOT1-209ENST00000566240 RPL13AP40429 203 aaKnown RBP3.91□□□□□ -1.78
CNOT1-209ENST00000566240 HSPA2P54652 639 aa3.91□□□□□ -1.78
CNOT1-209ENST00000566240 BST1Q10588 318 aa3.91□□□□□ -1.78
CNOT1-209ENST00000566240 UFSP1Q6NVU6 142 aa3.91□□□□□ -1.78
CNOT1-209ENST00000566240 CTAGE6Q86UF2 777 aa3.91□□□□□ -1.78
CNOT1-209ENST00000566240 SLC35F2Q8IXU6 374 aa3.91□□□□□ -1.78
CNOT1-209ENST00000566240 VPS8Q8N3P4 1428 aa3.91□□□□□ -1.78
CNOT1-209ENST00000566240 NECAB1Q8N987 351 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms