RNA–Protein interactions for RNA: ENST00000565639.6

PKD1-230, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 1,976 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-230ENST00000565639 RHOXF1Q8NHV9 184 aa17.67■□□□□ 0.42
PKD1-230ENST00000565639 CNIH3Q8TBE1 160 aa17.67■□□□□ 0.42
PKD1-230ENST00000565639 RNF217Q8TC41 542 aa17.67■□□□□ 0.42
PKD1-230ENST00000565639 SLC22A8Q8TCC7 542 aa17.67■□□□□ 0.42
PKD1-230ENST00000565639 TTC9Q92623 222 aa17.67■□□□□ 0.42
PKD1-230ENST00000565639 TMCO6Q96DC7 493 aa17.67■□□□□ 0.42
PKD1-230ENST00000565639 ARSGQ96EG1 525 aa17.67■□□□□ 0.42
PKD1-230ENST00000565639 CNIH4Q9P003 139 aa17.67■□□□□ 0.42
PKD1-230ENST00000565639 RNF6Q9Y252 685 aa17.67■□□□□ 0.42
PKD1-230ENST00000565639 TMEM5Q9Y2B1 443 aa17.67■□□□□ 0.42
PKD1-230ENST00000565639 MED31Q9Y3C7 131 aa17.67■□□□□ 0.42
PKD1-230ENST00000565639 SPAARA0A1B0GVQ0 90 aa17.66■□□□□ 0.42
PKD1-230ENST00000565639 C21orf140B9A014 251 aa17.66■□□□□ 0.42
PKD1-230ENST00000565639 OIP5O43482 229 aa17.66■□□□□ 0.42
PKD1-230ENST00000565639 PIP5K1CO60331 668 aa17.66■□□□□ 0.42
PKD1-230ENST00000565639 ZNF354AO60765 605 aaPredicted RBP17.66■□□□□ 0.42
PKD1-230ENST00000565639 TNFSF15O95150 251 aa17.66■□□□□ 0.42
PKD1-230ENST00000565639 IDH2P48735 452 aaKnown RBP17.66■□□□□ 0.42
PKD1-230ENST00000565639 GABARAPL2P60520 117 aa17.66■□□□□ 0.42
PKD1-230ENST00000565639 WBP2NLQ6ICG8 309 aa17.66■□□□□ 0.42
PKD1-230ENST00000565639 CBLN3Q6UW01 205 aa17.66■□□□□ 0.42
PKD1-230ENST00000565639 NUP54Q7Z3B4 507 aa17.66■□□□□ 0.42
PKD1-230ENST00000565639 MARCH3Q86UD3 253 aa17.66■□□□□ 0.42
PKD1-230ENST00000565639 TMPRSS12Q86WS5 348 aa17.66■□□□□ 0.42
PKD1-230ENST00000565639 MISPQ8IVT2 679 aa17.66■□□□□ 0.42
PKD1-230ENST00000565639 NLGN4YQ8NFZ3 816 aaPredicted RBP17.66■□□□□ 0.42
PKD1-230ENST00000565639 GPR87Q9BY21 358 aa17.66■□□□□ 0.42
PKD1-230ENST00000565639 IMPAD1Q9NX62 359 aa17.66■□□□□ 0.42
PKD1-230ENST00000565639 HEATR5AQ86XA9 2040 aa17.66■□□□□ 0.42
PKD1-230ENST00000565639 NSG1A0A0A6YYJ2 146 aa17.66■□□□□ 0.42
PKD1-230ENST00000565639 DPPA5A6NC42 116 aa17.66■□□□□ 0.42
PKD1-230ENST00000565639 PROB1E7EW31 1015 aa17.66■□□□□ 0.42
PKD1-230ENST00000565639 SLC1A7O00341 560 aa17.66■□□□□ 0.42
PKD1-230ENST00000565639 MPZL2O60487 215 aa17.66■□□□□ 0.42
PKD1-230ENST00000565639 ATP6V1B1P15313 513 aa17.66■□□□□ 0.42
PKD1-230ENST00000565639 RPL5P46777 297 aaKnown RBP17.66■□□□□ 0.42
PKD1-230ENST00000565639 CTBP2P56545 445 aa17.66■□□□□ 0.42
PKD1-230ENST00000565639 CSNK2BP67870 215 aa17.66■□□□□ 0.42
PKD1-230ENST00000565639 ZNF117Q03924 483 aa17.66■□□□□ 0.42
PKD1-230ENST00000565639 PPP1R32Q7Z5V6 425 aa17.66■□□□□ 0.42
PKD1-230ENST00000565639 CDK20Q8IZL9 346 aa17.66■□□□□ 0.42
PKD1-230ENST00000565639 TMCO5AQ8N6Q1 288 aa17.66■□□□□ 0.42
PKD1-230ENST00000565639 RNF138Q8WVD3 245 aa17.66■□□□□ 0.42
PKD1-230ENST00000565639 HGDQ93099 445 aa17.66■□□□□ 0.42
PKD1-230ENST00000565639 RTN4RQ9BZR6 473 aa17.66■□□□□ 0.42
PKD1-230ENST00000565639 RYDENQ9NUL5 291 aaKnown RBP17.66■□□□□ 0.42
PKD1-230ENST00000565639 WBP4O75554 376 aaKnown RBP17.65■□□□□ 0.42
PKD1-230ENST00000565639 SMNDC1O75940 238 aaKnown RBP eCLIP17.65■□□□□ 0.425e-7■■■■□ 24.5
PKD1-230ENST00000565639 TFAP2AP05549 437 aa17.65■□□□□ 0.42
PKD1-230ENST00000565639 IGFBP1P08833 259 aaPredicted RBP17.65■□□□□ 0.42
PKD1-230ENST00000565639 TMEM236Q5W0B7 351 aa17.65■□□□□ 0.42
PKD1-230ENST00000565639 C12orf73Q69YU5 71 aa17.65■□□□□ 0.42
PKD1-230ENST00000565639 LYPD8Q6UX82 237 aa17.65■□□□□ 0.42
PKD1-230ENST00000565639 TMPRSS11FQ6ZWK6 438 aa17.65■□□□□ 0.42
PKD1-230ENST00000565639 KIF18BQ86Y91 864 aa17.65■□□□□ 0.42
PKD1-230ENST00000565639 CLDN22Q8N7P3 220 aa17.65■□□□□ 0.42
PKD1-230ENST00000565639 UBE2FQ969M7 185 aa17.65■□□□□ 0.42
PKD1-230ENST00000565639 C3orf49Q96BT1 292 aa17.65■□□□□ 0.42
PKD1-230ENST00000565639 RASSF1Q9NS23 344 aa17.65■□□□□ 0.42
PKD1-230ENST00000565639 EXPH5Q8NEV8 1989 aa17.65■□□□□ 0.42
PKD1-230ENST00000565639 A0A087WUJ7 227 aa17.64■□□□□ 0.41
PKD1-230ENST00000565639 HCRTR2O43614 444 aa17.64■□□□□ 0.41
PKD1-230ENST00000565639 OR2J2O76002 312 aa17.64■□□□□ 0.41
PKD1-230ENST00000565639 FBXO45P0C2W1 286 aa17.64■□□□□ 0.41
PKD1-230ENST00000565639 GABRB1P18505 474 aa17.64■□□□□ 0.41
PKD1-230ENST00000565639 GPR4P46093 362 aa17.64■□□□□ 0.41
PKD1-230ENST00000565639 GIPRP48546 466 aa17.64■□□□□ 0.41
PKD1-230ENST00000565639 CCR4P51679 360 aa17.64■□□□□ 0.41
PKD1-230ENST00000565639 NR1H2P55055 460 aa17.64■□□□□ 0.41
PKD1-230ENST00000565639 CDH15P55291 814 aa17.64■□□□□ 0.41
PKD1-230ENST00000565639 FBXW4P57775 412 aa17.64■□□□□ 0.41
PKD1-230ENST00000565639 RPS18P62269 152 aaKnown RBP17.64■□□□□ 0.41
PKD1-230ENST00000565639 DNASE1L3Q13609 305 aa17.64■□□□□ 0.41
PKD1-230ENST00000565639 BROXQ5VW32 411 aa17.64■□□□□ 0.41
PKD1-230ENST00000565639 APH1BQ8WW43 257 aa17.64■□□□□ 0.41
PKD1-230ENST00000565639 SLC25A19Q9HC21 320 aa17.64■□□□□ 0.41
PKD1-230ENST00000565639 ZNF226Q9NYT6 803 aa17.64■□□□□ 0.41
PKD1-230ENST00000565639 IL20Q9NYY1 176 aa17.64■□□□□ 0.41
PKD1-230ENST00000565639 ICAM5Q9UMF0 924 aa17.64■□□□□ 0.41
PKD1-230ENST00000565639 TERTO14746 1132 aaKnown RBP17.64■□□□□ 0.41
PKD1-230ENST00000565639 PNMTP11086 282 aa17.64■□□□□ 0.41
PKD1-230ENST00000565639 IFI30P13284 250 aa17.64■□□□□ 0.41
PKD1-230ENST00000565639 ICAM2P13598 275 aa17.64■□□□□ 0.41
PKD1-230ENST00000565639 CDK5Q00535 292 aa17.64■□□□□ 0.41
PKD1-230ENST00000565639 MEX3DQ86XN8 651 aaKnown RBP17.64■□□□□ 0.41
PKD1-230ENST00000565639 P3H2Q8IVL5 708 aa17.64■□□□□ 0.41
PKD1-230ENST00000565639 BPIFB6Q8NFQ5 453 aa17.64■□□□□ 0.41
PKD1-230ENST00000565639 PFN4Q8NHR9 129 aa17.64■□□□□ 0.41
PKD1-230ENST00000565639 TEX47Q8TBZ9 253 aa17.64■□□□□ 0.41
PKD1-230ENST00000565639 TRUB1Q8WWH5 349 aaKnown RBP17.64■□□□□ 0.41
PKD1-230ENST00000565639 BPIFA2Q96DR5 249 aa17.64■□□□□ 0.41
PKD1-230ENST00000565639 C12orf10Q9HB07 376 aa17.64■□□□□ 0.41
PKD1-230ENST00000565639 MEPEQ9NQ76 525 aaPredicted RBP17.64■□□□□ 0.41
PKD1-230ENST00000565639 SCN3BQ9NY72 215 aa17.64■□□□□ 0.41
PKD1-230ENST00000565639 TPRKBQ9Y3C4 175 aa17.64■□□□□ 0.41
PKD1-230ENST00000565639 ADAM10O14672 748 aa17.63■□□□□ 0.41
PKD1-230ENST00000565639 RAD1O60671 282 aa17.63■□□□□ 0.41
PKD1-230ENST00000565639 EEF1B2P24534 225 aaKnown RBP17.63■□□□□ 0.41
PKD1-230ENST00000565639 FMO3P31513 532 aa17.63■□□□□ 0.41
PKD1-230ENST00000565639 CASP12Q6UXS9 341 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms