RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 SLCO1B1Q9Y6L6 691 aa2.77□□□□□ -1.97
UBR1-205ENST00000564540 MUC19Q7Z5P9 8384 aa2.77□□□□□ -1.97
UBR1-205ENST00000564540 ASTN1O14525 1302 aa2.76□□□□□ -1.97
UBR1-205ENST00000564540 IGKV2-28A0A075B6P5 120 aa2.76□□□□□ -1.97
UBR1-205ENST00000564540 SPRR5A0A1B0GTR4 108 aa2.76□□□□□ -1.97
UBR1-205ENST00000564540 HCN1O60741 890 aa2.76□□□□□ -1.97
UBR1-205ENST00000564540 FOXH1O75593 365 aa2.76□□□□□ -1.97
UBR1-205ENST00000564540 IGKV2D-28P01615 120 aa2.76□□□□□ -1.97
UBR1-205ENST00000564540 HEXBP07686 556 aa2.76□□□□□ -1.97
UBR1-205ENST00000564540 GCFC2P16383 781 aaKnown RBP2.76□□□□□ -1.97
UBR1-205ENST00000564540 AXLP30530 894 aa2.76□□□□□ -1.97
UBR1-205ENST00000564540 BDH1Q02338 343 aa2.76□□□□□ -1.97
UBR1-205ENST00000564540 PAX5Q02548 391 aa2.76□□□□□ -1.97
UBR1-205ENST00000564540 WDR74Q6RFH5 385 aaPredicted RBP2.76□□□□□ -1.97
UBR1-205ENST00000564540 ZFP2Q6ZN57 461 aa2.76□□□□□ -1.97
UBR1-205ENST00000564540 RNF165Q6ZSG1 346 aa2.76□□□□□ -1.97
UBR1-205ENST00000564540 MIER3Q7Z3K6 550 aa2.76□□□□□ -1.97
UBR1-205ENST00000564540 TBC1D21Q8IYX1 336 aa2.76□□□□□ -1.97
UBR1-205ENST00000564540 LINC01561Q8N1V8 128 aa2.76□□□□□ -1.97
UBR1-205ENST00000564540 MTURNQ8N3F0 131 aa2.76□□□□□ -1.97
UBR1-205ENST00000564540 MDS2Q8NDY4 140 aa2.76□□□□□ -1.97
UBR1-205ENST00000564540 CNNM3Q8NE01 707 aa2.76□□□□□ -1.97
UBR1-205ENST00000564540 CNIH3Q8TBE1 160 aa2.76□□□□□ -1.97
UBR1-205ENST00000564540 TRIM44Q96DX7 344 aaPredicted RBP2.76□□□□□ -1.97
UBR1-205ENST00000564540 MS4A14Q96JA4 679 aa2.76□□□□□ -1.97
UBR1-205ENST00000564540 NSMCE2Q96MF7 247 aa2.76□□□□□ -1.97
UBR1-205ENST00000564540 FAM111AQ96PZ2 611 aa2.76□□□□□ -1.97
UBR1-205ENST00000564540 CTRCQ99895 268 aa2.76□□□□□ -1.97
UBR1-205ENST00000564540 RTBDNQ9BSG5 229 aaPredicted RBP2.76□□□□□ -1.97
UBR1-205ENST00000564540 FEM1AQ9BSK4 669 aa2.76□□□□□ -1.97
UBR1-205ENST00000564540 MAGT1Q9H0U3 335 aa2.76□□□□□ -1.97
UBR1-205ENST00000564540 AP1M2Q9Y6Q5 423 aa2.76□□□□□ -1.97
UBR1-205ENST00000564540 CCDC7Q96M83 1385 aa2.75□□□□□ -1.97
UBR1-205ENST00000564540 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.75□□□□□ -1.97
UBR1-205ENST00000564540 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.75□□□□□ -1.97
UBR1-205ENST00000564540 ICOSLGO75144 302 aa2.75□□□□□ -1.97
UBR1-205ENST00000564540 KLF8O95600 359 aaPredicted RBP2.75□□□□□ -1.97
UBR1-205ENST00000564540 IFNB1P01574 187 aa2.75□□□□□ -1.97
UBR1-205ENST00000564540 UQCRBP14927 111 aa2.75□□□□□ -1.97
UBR1-205ENST00000564540 SERPINA2P20848 420 aa2.75□□□□□ -1.97
UBR1-205ENST00000564540 LHX2P50458 406 aa2.75□□□□□ -1.97
UBR1-205ENST00000564540 SLC26A5P58743 744 aa2.75□□□□□ -1.97
UBR1-205ENST00000564540 NSDHLQ15738 373 aa2.75□□□□□ -1.97
UBR1-205ENST00000564540 CHI3L2Q15782 390 aa2.75□□□□□ -1.97
UBR1-205ENST00000564540 ANKDD1AQ495B1 522 aa2.75□□□□□ -1.97
UBR1-205ENST00000564540 C12orf60Q5U649 245 aa2.75□□□□□ -1.97
UBR1-205ENST00000564540 ZNF429Q86V71 674 aa2.75□□□□□ -1.97
UBR1-205ENST00000564540 MINDY2Q8NBR6 621 aa2.75□□□□□ -1.97
UBR1-205ENST00000564540 ZNF721Q8TF20 911 aa2.75□□□□□ -1.97
UBR1-205ENST00000564540 SYAP1Q96A49 352 aaPredicted RBP2.75□□□□□ -1.97
UBR1-205ENST00000564540 NMNAT2Q9BZQ4 307 aa2.75□□□□□ -1.97
UBR1-205ENST00000564540 DCAF16Q9NXF7 216 aa2.75□□□□□ -1.97
UBR1-205ENST00000564540 CGNQ9P2M7 1197 aaKnown RBP2.75□□□□□ -1.97
UBR1-205ENST00000564540 ANGPTL2Q9UKU9 493 aa2.75□□□□□ -1.97
UBR1-205ENST00000564540 AURKCQ9UQB9 309 aa2.75□□□□□ -1.97
UBR1-205ENST00000564540 PLLPQ9Y342 182 aa2.75□□□□□ -1.97
UBR1-205ENST00000564540 RRP15Q9Y3B9 282 aaKnown RBP2.75□□□□□ -1.97
UBR1-205ENST00000564540 CLCA3PQ9Y6N3 262 aa2.75□□□□□ -1.97
UBR1-205ENST00000564540 ATP8B3O60423 1300 aa2.74□□□□□ -1.97
UBR1-205ENST00000564540 TTC21BQ7Z4L5 1316 aa2.74□□□□□ -1.97
UBR1-205ENST00000564540 A0A1W2PQ67 120 aa2.74□□□□□ -1.97
UBR1-205ENST00000564540 OR6C65A6NJZ3 312 aa2.74□□□□□ -1.97
UBR1-205ENST00000564540 WASH3PC4AMC7 463 aa2.74□□□□□ -1.97
UBR1-205ENST00000564540 H3BMQ9 156 aa2.74□□□□□ -1.97
UBR1-205ENST00000564540 TMX2-CTNND1H3BSU7 103 aa2.74□□□□□ -1.97
UBR1-205ENST00000564540 MPHOSPH10O00566 681 aaKnown RBP2.74□□□□□ -1.97
UBR1-205ENST00000564540 TRIM16O95361 564 aa2.74□□□□□ -1.97
UBR1-205ENST00000564540 PCCAP05165 728 aaPredicted RBP2.74□□□□□ -1.97
UBR1-205ENST00000564540 HBQ1P09105 142 aa2.74□□□□□ -1.97
UBR1-205ENST00000564540 CYLC1P35663 651 aaPredicted RBP2.74□□□□□ -1.97
UBR1-205ENST00000564540 DLSTP36957 453 aa2.74□□□□□ -1.97
UBR1-205ENST00000564540 OSTNP61366 133 aa2.74□□□□□ -1.97
UBR1-205ENST00000564540 CSNK1G2P78368 415 aa2.74□□□□□ -1.97
UBR1-205ENST00000564540 MAP2K1Q02750 393 aaPredicted RBP2.74□□□□□ -1.97
UBR1-205ENST00000564540 GABPB1Q06547 395 aaPredicted RBP2.74□□□□□ -1.97
UBR1-205ENST00000564540 EIF4EBP1Q13541 118 aaPredicted RBP2.74□□□□□ -1.97
UBR1-205ENST00000564540 LDLRAP1Q5SW96 308 aa2.74□□□□□ -1.97
UBR1-205ENST00000564540 WASH2PQ6VEQ5 465 aa2.74□□□□□ -1.97
UBR1-205ENST00000564540 ARMCX2Q7L311 632 aa2.74□□□□□ -1.97
UBR1-205ENST00000564540 PPP1R42Q7Z4L9 355 aa2.74□□□□□ -1.97
UBR1-205ENST00000564540 VRK2Q86Y07 508 aa2.74□□□□□ -1.97
UBR1-205ENST00000564540 RNF148Q8N7C7 305 aa2.74□□□□□ -1.97
UBR1-205ENST00000564540 DNAJA4Q8WW22 397 aaPredicted RBP2.74□□□□□ -1.97
UBR1-205ENST00000564540 FAM151AQ8WW52 585 aa2.74□□□□□ -1.97
UBR1-205ENST00000564540 ZNF606Q8WXB4 792 aa2.74□□□□□ -1.97
UBR1-205ENST00000564540 FCGR1BQ92637 280 aa2.74□□□□□ -1.97
UBR1-205ENST00000564540 N4BP2L2Q92802 583 aaPredicted RBP2.74□□□□□ -1.97
UBR1-205ENST00000564540 MRPL38Q96DV4 380 aaKnown RBP2.74□□□□□ -1.97
UBR1-205ENST00000564540 CELF6Q96J87 481 aaKnown RBP2.74□□□□□ -1.97
UBR1-205ENST00000564540 CITED1Q99966 193 aa2.74□□□□□ -1.97
UBR1-205ENST00000564540 ATG10Q9H0Y0 220 aa2.74□□□□□ -1.97
UBR1-205ENST00000564540 LPAR2Q9HBW0 351 aa2.74□□□□□ -1.97
UBR1-205ENST00000564540 SPASTQ9UBP0 616 aa2.74□□□□□ -1.97
UBR1-205ENST00000564540 CYTH4Q9UIA0 394 aa2.74□□□□□ -1.97
UBR1-205ENST00000564540 BTNL2Q9UIR0 455 aa2.74□□□□□ -1.97
UBR1-205ENST00000564540 PRPF19Q9UMS4 504 aaKnown RBP2.74□□□□□ -1.97
UBR1-205ENST00000564540 UGT2A1Q9Y4X1 527 aa2.74□□□□□ -1.97
UBR1-205ENST00000564540 PTCH1Q13635 1447 aa2.74□□□□□ -1.97
UBR1-205ENST00000564540 ABCC4O15439 1325 aa2.73□□□□□ -1.97
UBR1-205ENST00000564540 ATAD2BQ9ULI0 1458 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms