RNA–Protein interactions for RNA: ENST00000564343.5

TCF4-223, Transcript of transcription factor 4, human

TSL 4

Gene TCF4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-223	ENST00000564343		K7EPI3	171 aa		4.62	□□□□□ -1.67
TCF4-223	ENST00000564343	UBXN8	O00124	270 aa		4.62	□□□□□ -1.67
TCF4-223	ENST00000564343	F2RL2	O00254	374 aa		4.62	□□□□□ -1.67
TCF4-223	ENST00000564343	PGRMC1	O00264	195 aa	Known RBP	4.62	□□□□□ -1.67
TCF4-223	ENST00000564343	ZIC3	O60481	467 aa		4.62	□□□□□ -1.67
TCF4-223	ENST00000564343	NME6	O75414	186 aa	Predicted RBP	4.62	□□□□□ -1.67
TCF4-223	ENST00000564343	RHOXF2B	P0C7M4	288 aa		4.62	□□□□□ -1.67
TCF4-223	ENST00000564343	POU2F1	P14859	743 aa		4.62	□□□□□ -1.67
TCF4-223	ENST00000564343	PAX1	P15863	534 aa		4.62	□□□□□ -1.67
TCF4-223	ENST00000564343	NAGA	P17050	411 aa		4.62	□□□□□ -1.67
TCF4-223	ENST00000564343	NT5E	P21589	574 aa		4.62	□□□□□ -1.67
TCF4-223	ENST00000564343	PIK3R1	P27986	724 aa		4.62	□□□□□ -1.67
TCF4-223	ENST00000564343	KCNJ5	P48544	419 aa		4.62	□□□□□ -1.67
TCF4-223	ENST00000564343	PIK3CG	P48736	1102 aa		4.62	□□□□□ -1.67
TCF4-223	ENST00000564343	PCYT1A	P49585	367 aa		4.62	□□□□□ -1.67
TCF4-223	ENST00000564343	XK	P51811	444 aa		4.62	□□□□□ -1.67
TCF4-223	ENST00000564343	ARFIP2	P53365	341 aa		4.62	□□□□□ -1.67
TCF4-223	ENST00000564343	SUCLG1	P53597	346 aa	Known RBP	4.62	□□□□□ -1.67
TCF4-223	ENST00000564343	SLC12A2	P55011	1212 aa		4.62	□□□□□ -1.67
TCF4-223	ENST00000564343	SUMO3	P55854	103 aa	Predicted RBP	4.62	□□□□□ -1.67
TCF4-223	ENST00000564343	ATP5J2	P56134	94 aa		4.62	□□□□□ -1.67
TCF4-223	ENST00000564343	SIRPA	P78324	504 aa		4.62	□□□□□ -1.67
TCF4-223	ENST00000564343	RPP38	P78345	283 aa	Known RBP	4.62	□□□□□ -1.67
TCF4-223	ENST00000564343	HMGCS1	Q01581	520 aa		4.62	□□□□□ -1.67
TCF4-223	ENST00000564343	DMTN	Q08495	405 aa		4.62	□□□□□ -1.67
TCF4-223	ENST00000564343	DLG1	Q12959	904 aa		4.62	□□□□□ -1.67
TCF4-223	ENST00000564343	PDIA2	Q13087	525 aa	Known RBP	4.62	□□□□□ -1.67
TCF4-223	ENST00000564343	SNTA1	Q13424	505 aa		4.62	□□□□□ -1.67
TCF4-223	ENST00000564343	PMS2P11	Q13670	270 aa		4.62	□□□□□ -1.67
TCF4-223	ENST00000564343	FRG1	Q14331	258 aa	Known RBP	4.62	□□□□□ -1.67
TCF4-223	ENST00000564343	MORF4L2	Q15014	288 aa		4.62	□□□□□ -1.67
TCF4-223	ENST00000564343	PRICKLE4	Q2TBC4	344 aa		4.62	□□□□□ -1.67
TCF4-223	ENST00000564343	HEPHL1	Q6MZM0	1159 aa		4.62	□□□□□ -1.67
TCF4-223	ENST00000564343	SLC30A6	Q6NXT4	461 aa		4.62	□□□□□ -1.67
TCF4-223	ENST00000564343	FAM180B	Q6P0A1	224 aa		4.62	□□□□□ -1.67
TCF4-223	ENST00000564343	LRRC70	Q7Z2Q7	622 aa		4.62	□□□□□ -1.67
TCF4-223	ENST00000564343	NUP54	Q7Z3B4	507 aa		4.62	□□□□□ -1.67
TCF4-223	ENST00000564343	ISCA2	Q86U28	154 aa		4.62	□□□□□ -1.67
TCF4-223	ENST00000564343	PLCZ1	Q86YW0	608 aa		4.62	□□□□□ -1.67
TCF4-223	ENST00000564343	UBQLNL	Q8IYU4	475 aa		4.62	□□□□□ -1.67
TCF4-223	ENST00000564343	TEX9	Q8N6V9	391 aa		4.62	□□□□□ -1.67
TCF4-223	ENST00000564343	FBXO36	Q8NEA4	188 aa		4.62	□□□□□ -1.67
TCF4-223	ENST00000564343	ACTRT1	Q8TDG2	376 aa		4.62	□□□□□ -1.67
TCF4-223	ENST00000564343	FIG4	Q92562	907 aa		4.62	□□□□□ -1.67
TCF4-223	ENST00000564343	UBE2E3	Q969T4	207 aa		4.62	□□□□□ -1.67
TCF4-223	ENST00000564343	NMD3	Q96D46	503 aa	Known RBP	4.62	□□□□□ -1.67
TCF4-223	ENST00000564343	LRRC39	Q96DD0	335 aa		4.62	□□□□□ -1.67
TCF4-223	ENST00000564343	OMA1	Q96E52	524 aa		4.62	□□□□□ -1.67
TCF4-223	ENST00000564343	ATOH8	Q96SQ7	321 aa		4.62	□□□□□ -1.67
TCF4-223	ENST00000564343	ITPA	Q9BY32	194 aa		4.62	□□□□□ -1.67
TCF4-223	ENST00000564343	KLHL4	Q9C0H6	718 aa		4.62	□□□□□ -1.67
TCF4-223	ENST00000564343	ALG9	Q9H6U8	611 aa		4.62	□□□□□ -1.67
TCF4-223	ENST00000564343	ACTR8	Q9H981	624 aa		4.62	□□□□□ -1.67
TCF4-223	ENST00000564343	ZNF701	Q9NV72	531 aa	Predicted RBP	4.62	□□□□□ -1.67
TCF4-223	ENST00000564343	LYAR	Q9NX58	379 aa	Known RBP	4.62	□□□□□ -1.67
TCF4-223	ENST00000564343	TAS2R10	Q9NYW0	307 aa		4.62	□□□□□ -1.67
TCF4-223	ENST00000564343	KLRF1	Q9NZS2	232 aa		4.62	□□□□□ -1.67
TCF4-223	ENST00000564343	OPTC	Q9UBM4	332 aa		4.62	□□□□□ -1.67
TCF4-223	ENST00000564343	ZNF639	Q9UID6	485 aa		4.62	□□□□□ -1.67
TCF4-223	ENST00000564343	DLGAP4	Q9Y2H0	992 aa		4.62	□□□□□ -1.67
TCF4-223	ENST00000564343	MALRD1	Q5VYJ5	2156 aa		4.62	□□□□□ -1.67
TCF4-223	ENST00000564343	CAD	P27708	2225 aa		4.62	□□□□□ -1.67
TCF4-223	ENST00000564343	WDR91	A4D1P6	747 aa		4.61	□□□□□ -1.67
TCF4-223	ENST00000564343	FRG2C	A6NGY1	282 aa		4.61	□□□□□ -1.67
TCF4-223	ENST00000564343	SLC22A20	A6NK97	555 aa		4.61	□□□□□ -1.67
TCF4-223	ENST00000564343	LINC01548	A6NM66	108 aa		4.61	□□□□□ -1.67
TCF4-223	ENST00000564343	SUPT3H	B4E1H0	165 aa		4.61	□□□□□ -1.67
TCF4-223	ENST00000564343		E7ESA3	106 aa		4.61	□□□□□ -1.67
TCF4-223	ENST00000564343		H0YIV9	168 aa		4.61	□□□□□ -1.67
TCF4-223	ENST00000564343	EMC8	O43402	210 aa		4.61	□□□□□ -1.67
TCF4-223	ENST00000564343	CDH16	O75309	829 aa		4.61	□□□□□ -1.67
TCF4-223	ENST00000564343	SUPT3H	O75486	399 aa		4.61	□□□□□ -1.67
TCF4-223	ENST00000564343	CRH	P06850	196 aa		4.61	□□□□□ -1.67
TCF4-223	ENST00000564343	CTAGE8	P0CG41	777 aa		4.61	□□□□□ -1.67
TCF4-223	ENST00000564343	CPM	P14384	443 aa		4.61	□□□□□ -1.67
TCF4-223	ENST00000564343	STMN1	P16949	149 aa		4.61	□□□□□ -1.67
TCF4-223	ENST00000564343	TBXA2R	P21731	343 aa		4.61	□□□□□ -1.67
TCF4-223	ENST00000564343	SERPINB1	P30740	379 aa		4.61	□□□□□ -1.67
TCF4-223	ENST00000564343	SSTR1	P30872	391 aa		4.61	□□□□□ -1.67
TCF4-223	ENST00000564343	SRD5A2	P31213	254 aa		4.61	□□□□□ -1.67
TCF4-223	ENST00000564343	GCK	P35557	465 aa		4.61	□□□□□ -1.67
TCF4-223	ENST00000564343	FEN1	P39748	380 aa	Known RBP	4.61	□□□□□ -1.67
TCF4-223	ENST00000564343	EMD	P50402	254 aa		4.61	□□□□□ -1.67
TCF4-223	ENST00000564343	ARFIP1	P53367	373 aa		4.61	□□□□□ -1.67
TCF4-223	ENST00000564343	GAS1	P54826	345 aa		4.61	□□□□□ -1.67
TCF4-223	ENST00000564343	B3GALT5-AS1	P59052	145 aa		4.61	□□□□□ -1.67
TCF4-223	ENST00000564343	GPX6	P59796	221 aa		4.61	□□□□□ -1.67
TCF4-223	ENST00000564343	RAB10	P61026	200 aa		4.61	□□□□□ -1.67
TCF4-223	ENST00000564343	ATP6V0D1	P61421	351 aa		4.61	□□□□□ -1.67
TCF4-223	ENST00000564343	EEF1A1	P68104	462 aa	Known RBP	4.61	□□□□□ -1.67
TCF4-223	ENST00000564343	PLCXD2	Q0VAA5	305 aa		4.61	□□□□□ -1.67
TCF4-223	ENST00000564343	CUL3	Q13618	768 aa		4.61	□□□□□ -1.67
TCF4-223	ENST00000564343	VEZF1	Q14119	521 aa		4.61	□□□□□ -1.67
TCF4-223	ENST00000564343	GUSBP1	Q15486	140 aa		4.61	□□□□□ -1.67
TCF4-223	ENST00000564343	ZKSCAN8	Q15776	578 aa	Predicted RBP	4.61	□□□□□ -1.67
TCF4-223	ENST00000564343	CLEC12B	Q2HXU8	276 aa		4.61	□□□□□ -1.67
TCF4-223	ENST00000564343	TRMT12	Q53H54	448 aa	Known RBP	4.61	□□□□□ -1.67
TCF4-223	ENST00000564343	EEF1A1P5	Q5VTE0	462 aa		4.61	□□□□□ -1.67
TCF4-223	ENST00000564343	LIPJ	Q5W064	366 aa		4.61	□□□□□ -1.67
TCF4-223	ENST00000564343	FAM219B	Q5XKK7	198 aa		4.61	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms