RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 MYNNQ9NPC7 610 aa9.07□□□□□ -0.96
SF3B3-204ENST00000563739 EQTNQ9NQ60 294 aa9.07□□□□□ -0.96
SF3B3-204ENST00000563739 SENP1Q9P0U3 644 aa9.07□□□□□ -0.96
SF3B3-204ENST00000563739 TRAF6Q9Y4K3 522 aa9.07□□□□□ -0.96
SF3B3-204ENST00000563739 IGKV3D-15A0A087WSY6 115 aa9.06□□□□□ -0.96
SF3B3-204ENST00000563739 A0A087WUV0 522 aaPredicted RBP9.06□□□□□ -0.96
SF3B3-204ENST00000563739 CENPVL1A0A0U1RR11 272 aa9.06□□□□□ -0.96
SF3B3-204ENST00000563739 GNG14A0A1W2PPG7 69 aa9.06□□□□□ -0.96
SF3B3-204ENST00000563739 SERTM1A2A2V5 107 aa9.06□□□□□ -0.96
SF3B3-204ENST00000563739 ZNF724A8MTY0 619 aa9.06□□□□□ -0.96
SF3B3-204ENST00000563739 NPIPB9F8W1W9 429 aa9.06□□□□□ -0.96
SF3B3-204ENST00000563739 RIPK2O43353 540 aa9.06□□□□□ -0.96
SF3B3-204ENST00000563739 ATP8B1O43520 1251 aa9.06□□□□□ -0.96
SF3B3-204ENST00000563739 DLX3O60479 287 aa9.06□□□□□ -0.96
SF3B3-204ENST00000563739 LILRA1O75019 489 aa9.06□□□□□ -0.96
SF3B3-204ENST00000563739 TGFAP01135 160 aa9.06□□□□□ -0.96
SF3B3-204ENST00000563739 ANXA4P09525 319 aaPredicted RBP9.06□□□□□ -0.96
SF3B3-204ENST00000563739 DHRS4L1P0CG22 281 aa9.06□□□□□ -0.96
SF3B3-204ENST00000563739 PTAFRP25105 342 aa9.06□□□□□ -0.96
SF3B3-204ENST00000563739 FRKP42685 505 aaPredicted RBP9.06□□□□□ -0.96
SF3B3-204ENST00000563739 FABP6P51161 128 aa9.06□□□□□ -0.96
SF3B3-204ENST00000563739 ZNF41P51814 821 aaPredicted RBP9.06□□□□□ -0.96
SF3B3-204ENST00000563739 VSNL1P62760 191 aa9.06□□□□□ -0.96
SF3B3-204ENST00000563739 PLAURQ03405 335 aa9.06□□□□□ -0.96
SF3B3-204ENST00000563739 CLCQ05315 142 aa9.06□□□□□ -0.96
SF3B3-204ENST00000563739 C2orf80Q0P641 193 aa9.06□□□□□ -0.96
SF3B3-204ENST00000563739 SQLEQ14534 574 aa9.06□□□□□ -0.96
SF3B3-204ENST00000563739 HEPACAMQ14CZ8 416 aa9.06□□□□□ -0.96
SF3B3-204ENST00000563739 GABRA6Q16445 453 aa9.06□□□□□ -0.96
SF3B3-204ENST00000563739 SPIN4Q56A73 249 aa9.06□□□□□ -0.96
SF3B3-204ENST00000563739 ZNF678Q5SXM1 525 aa9.06□□□□□ -0.96
SF3B3-204ENST00000563739 ANKRD26P1Q6NSI1 321 aa9.06□□□□□ -0.96
SF3B3-204ENST00000563739 SLC22A25Q6T423 547 aa9.06□□□□□ -0.96
SF3B3-204ENST00000563739 C12orf54Q6X4T0 127 aa9.06□□□□□ -0.96
SF3B3-204ENST00000563739 TRMT10CQ7L0Y3 403 aaKnown RBP9.06□□□□□ -0.96
SF3B3-204ENST00000563739 FBXL14Q8N1E6 418 aa9.06□□□□□ -0.96
SF3B3-204ENST00000563739 ZNF527Q8NB42 609 aa9.06□□□□□ -0.96
SF3B3-204ENST00000563739 OR2W6PQ8NHA6 318 aa9.06□□□□□ -0.96
SF3B3-204ENST00000563739 B4GALNT2Q8NHY0 566 aa9.06□□□□□ -0.96
SF3B3-204ENST00000563739 GPR119Q8TDV5 335 aa9.06□□□□□ -0.96
SF3B3-204ENST00000563739 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.06□□□□□ -0.96
SF3B3-204ENST00000563739 CIDECQ96AQ7 238 aaPredicted RBP9.06□□□□□ -0.96
SF3B3-204ENST00000563739 C3orf49Q96BT1 292 aa9.06□□□□□ -0.96
SF3B3-204ENST00000563739 C16orf58Q96GQ5 468 aa9.06□□□□□ -0.96
SF3B3-204ENST00000563739 USB1Q9BQ65 265 aaKnown RBP9.06□□□□□ -0.96
SF3B3-204ENST00000563739 INPP5KQ9BT40 448 aa9.06□□□□□ -0.96
SF3B3-204ENST00000563739 SHCBP1LQ9BZQ2 653 aa9.06□□□□□ -0.96
SF3B3-204ENST00000563739 SIRT3Q9NTG7 399 aaPredicted RBP9.06□□□□□ -0.96
SF3B3-204ENST00000563739 ZNF446Q9NWS9 450 aa9.06□□□□□ -0.96
SF3B3-204ENST00000563739 CCL27Q9Y4X3 112 aa9.06□□□□□ -0.96
SF3B3-204ENST00000563739 TIMM22Q9Y584 194 aa9.06□□□□□ -0.96
SF3B3-204ENST00000563739 ACTL7BQ9Y614 415 aa9.06□□□□□ -0.96
SF3B3-204ENST00000563739 NUP214P35658 2090 aaPredicted RBP9.05□□□□□ -0.96
SF3B3-204ENST00000563739 KIAA0513O60268 411 aa9.05□□□□□ -0.96
SF3B3-204ENST00000563739 ERLIN1O75477 346 aa9.05□□□□□ -0.96
SF3B3-204ENST00000563739 KCNH1O95259 989 aa9.05□□□□□ -0.96
SF3B3-204ENST00000563739 FESP07332 822 aa9.05□□□□□ -0.96
SF3B3-204ENST00000563739 PABPC4LP0CB38 370 aaKnown RBP9.05□□□□□ -0.96
SF3B3-204ENST00000563739 TYK2P29597 1187 aa9.05□□□□□ -0.96
SF3B3-204ENST00000563739 CLK3P49761 638 aaKnown RBP9.05□□□□□ -0.96
SF3B3-204ENST00000563739 PDLIM4P50479 330 aa9.05□□□□□ -0.96
SF3B3-204ENST00000563739 RAC3P60763 192 aa9.05□□□□□ -0.96
SF3B3-204ENST00000563739 ACSM2AQ08AH3 577 aa9.05□□□□□ -0.96
SF3B3-204ENST00000563739 UAP1Q16222 522 aaPredicted RBP9.05□□□□□ -0.96
SF3B3-204ENST00000563739 ARL13AQ5H913 290 aaPredicted RBP9.05□□□□□ -0.96
SF3B3-204ENST00000563739 PDSS1Q5T2R2 415 aa9.05□□□□□ -0.96
SF3B3-204ENST00000563739 LIPNQ5VXI9 398 aa9.05□□□□□ -0.96
SF3B3-204ENST00000563739 ACSM2BQ68CK6 577 aa9.05□□□□□ -0.96
SF3B3-204ENST00000563739 GTF2IRD2BQ6EKJ0 949 aa9.05□□□□□ -0.96
SF3B3-204ENST00000563739 TMEM108Q6UXF1 575 aa9.05□□□□□ -0.96
SF3B3-204ENST00000563739 DEF8Q6ZN54 512 aa9.05□□□□□ -0.96
SF3B3-204ENST00000563739 GTF2IRD2Q86UP8 949 aa9.05□□□□□ -0.96
SF3B3-204ENST00000563739 P2RY8Q86VZ1 359 aa9.05□□□□□ -0.96
SF3B3-204ENST00000563739 GPR151Q8TDV0 419 aa9.05□□□□□ -0.96
SF3B3-204ENST00000563739 RADILQ96JH8 1075 aa9.05□□□□□ -0.96
SF3B3-204ENST00000563739 PAFAH2Q99487 392 aa9.05□□□□□ -0.96
SF3B3-204ENST00000563739 C1QTNF6Q9BXI9 259 aa9.05□□□□□ -0.96
SF3B3-204ENST00000563739 KRTAP17-1Q9BYP8 105 aa9.05□□□□□ -0.96
SF3B3-204ENST00000563739 GIMAP4Q9NUV9 329 aa9.05□□□□□ -0.96
SF3B3-204ENST00000563739 FAM53CQ9NYF3 392 aa9.05□□□□□ -0.96
SF3B3-204ENST00000563739 KLHL9Q9P2J3 617 aa9.05□□□□□ -0.96
SF3B3-204ENST00000563739 MALT1Q9UDY8 824 aa9.05□□□□□ -0.96
SF3B3-204ENST00000563739 GRID1Q9ULK0 1009 aa9.05□□□□□ -0.96
SF3B3-204ENST00000563739 MGAT4BQ9UQ53 548 aa9.05□□□□□ -0.96
SF3B3-204ENST00000563739 POLR3HQ9Y535 204 aaPredicted RBP9.05□□□□□ -0.96
SF3B3-204ENST00000563739 KCNE3Q9Y6H6 103 aa9.05□□□□□ -0.96
SF3B3-204ENST00000563739 EXOC1LA0A1B0GW35 172 aa9.04□□□□□ -0.96
SF3B3-204ENST00000563739 TMEM89A2RUT3 159 aa9.04□□□□□ -0.96
SF3B3-204ENST00000563739 M0R1B8 84 aa9.04□□□□□ -0.96
SF3B3-204ENST00000563739 NDUFS8O00217 210 aa9.04□□□□□ -0.96
SF3B3-204ENST00000563739 DNAJA2O60884 412 aa9.04□□□□□ -0.96
SF3B3-204ENST00000563739 INHBAP08476 426 aa9.04□□□□□ -0.96
SF3B3-204ENST00000563739 RBP1P09455 135 aa9.04□□□□□ -0.96
SF3B3-204ENST00000563739 TACSTD2P09758 323 aa9.04□□□□□ -0.96
SF3B3-204ENST00000563739 PRPS2P11908 318 aa9.04□□□□□ -0.96
SF3B3-204ENST00000563739 ME2P23368 584 aa9.04□□□□□ -0.96
SF3B3-204ENST00000563739 PSMD4P55036 377 aaKnown RBP9.04□□□□□ -0.96
SF3B3-204ENST00000563739 PHC1P78364 1004 aa9.04□□□□□ -0.96
SF3B3-204ENST00000563739 CHRNEQ04844 493 aa9.04□□□□□ -0.96
SF3B3-204ENST00000563739 BTKQ06187 659 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms