RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 RBM4BQ9BQ04 359 aaKnown RBP9.27□□□□□ -0.92
SMG1-208ENST00000563448 RBM4Q9BWF3 364 aaKnown RBP9.27□□□□□ -0.92
SMG1-208ENST00000563448 OSBPL11Q9BXB4 747 aa9.27□□□□□ -0.92
SMG1-208ENST00000563448 ANKRD19PQ9H560 264 aa9.27□□□□□ -0.92
SMG1-208ENST00000563448 PROK2Q9HC23 129 aa9.27□□□□□ -0.92
SMG1-208ENST00000563448 STMN3Q9NZ72 180 aa9.27□□□□□ -0.92
SMG1-208ENST00000563448 TMEFF2Q9UIK5 374 aaPredicted RBP9.27□□□□□ -0.92
SMG1-208ENST00000563448 TMCC3Q9ULS5 477 aa9.27□□□□□ -0.92
SMG1-208ENST00000563448 POLHQ9Y253 713 aa9.27□□□□□ -0.92
SMG1-208ENST00000563448 LRRC42Q9Y546 428 aa9.27□□□□□ -0.92
SMG1-208ENST00000563448 WIF1Q9Y5W5 379 aa9.27□□□□□ -0.92
SMG1-208ENST00000563448 A0A087WUU8 490 aa9.27□□□□□ -0.93
SMG1-208ENST00000563448 GASTP01350 101 aa9.27□□□□□ -0.93
SMG1-208ENST00000563448 CBLP22681 906 aa9.27□□□□□ -0.93
SMG1-208ENST00000563448 SLC6A8P48029 635 aa9.27□□□□□ -0.93
SMG1-208ENST00000563448 HLCSP50747 726 aa9.27□□□□□ -0.93
SMG1-208ENST00000563448 RPP38P78345 283 aaKnown RBP9.27□□□□□ -0.93
SMG1-208ENST00000563448 INPP5JQ15735 1006 aaPredicted RBP9.27□□□□□ -0.93
SMG1-208ENST00000563448 TOMM34Q15785 309 aaPredicted RBP9.27□□□□□ -0.93
SMG1-208ENST00000563448 COL28A1Q2UY09 1125 aa9.27□□□□□ -0.93
SMG1-208ENST00000563448 PRAMEF20Q5VT98 475 aa9.27□□□□□ -0.93
SMG1-208ENST00000563448 KDM4DQ6B0I6 523 aa9.27□□□□□ -0.93
SMG1-208ENST00000563448 OR5M10Q6IEU7 315 aa9.27□□□□□ -0.93
SMG1-208ENST00000563448 RTL4Q6ZR62 310 aa9.27□□□□□ -0.93
SMG1-208ENST00000563448 MDGA2Q7Z553 956 aa9.27□□□□□ -0.93
SMG1-208ENST00000563448 TMEM255BQ8WV15 326 aa9.27□□□□□ -0.93
SMG1-208ENST00000563448 SLC38A4Q969I6 547 aa9.27□□□□□ -0.93
SMG1-208ENST00000563448 FRMD6Q96NE9 622 aa9.27□□□□□ -0.93
SMG1-208ENST00000563448 CCNL2Q96S94 520 aaPredicted RBP9.27□□□□□ -0.93
SMG1-208ENST00000563448 FEVQ99581 238 aa9.27□□□□□ -0.93
SMG1-208ENST00000563448 NIPSNAP1Q9BPW8 284 aa9.27□□□□□ -0.93
SMG1-208ENST00000563448 ANGPTL4Q9BY76 406 aa9.27□□□□□ -0.93
SMG1-208ENST00000563448 DPH1Q9BZG8 443 aa9.27□□□□□ -0.93
SMG1-208ENST00000563448 ING2Q9H160 280 aa9.27□□□□□ -0.93
SMG1-208ENST00000563448 CPNE5Q9HCH3 593 aa9.27□□□□□ -0.93
SMG1-208ENST00000563448 TEKT2Q9UIF3 430 aa9.27□□□□□ -0.93
SMG1-208ENST00000563448 SSUH2Q9Y2M2 353 aa9.27□□□□□ -0.93
SMG1-208ENST00000563448 KIAA1549Q9HCM3 1950 aa9.27□□□□□ -0.93
SMG1-208ENST00000563448 SPTBN4Q9H254 2564 aa9.27□□□□□ -0.93
SMG1-208ENST00000563448 ARRDC5A6NEK1 342 aa9.26□□□□□ -0.93
SMG1-208ENST00000563448 A6NL46 340 aa9.26□□□□□ -0.93
SMG1-208ENST00000563448 CHP2O43745 196 aa9.26□□□□□ -0.93
SMG1-208ENST00000563448 OR10H3O60404 316 aa9.26□□□□□ -0.93
SMG1-208ENST00000563448 MITFO75030 526 aaPredicted RBP9.26□□□□□ -0.93
SMG1-208ENST00000563448 F10P00742 488 aa9.26□□□□□ -0.93
SMG1-208ENST00000563448 ANXA8P13928 327 aa9.26□□□□□ -0.93
SMG1-208ENST00000563448 PTNP21246 168 aa9.26□□□□□ -0.93
SMG1-208ENST00000563448 MST1P26927 711 aa9.26□□□□□ -0.93
SMG1-208ENST00000563448 COPZ1P61923 177 aa9.26□□□□□ -0.93
SMG1-208ENST00000563448 SNTA1Q13424 505 aa9.26□□□□□ -0.93
SMG1-208ENST00000563448 RAPSNQ13702 412 aa9.26□□□□□ -0.93
SMG1-208ENST00000563448 CBFBQ13951 182 aa9.26□□□□□ -0.93
SMG1-208ENST00000563448 ABHD17BQ5VST6 288 aa9.26□□□□□ -0.93
SMG1-208ENST00000563448 SLC22A10Q63ZE4 541 aa9.26□□□□□ -0.93
SMG1-208ENST00000563448 WBP2NLQ6ICG8 309 aa9.26□□□□□ -0.93
SMG1-208ENST00000563448 SLC30A6Q6NXT4 461 aa9.26□□□□□ -0.93
SMG1-208ENST00000563448 PGBD2Q6P3X8 592 aa9.26□□□□□ -0.93
SMG1-208ENST00000563448 LINC00114Q6XXX2 140 aa9.26□□□□□ -0.93
SMG1-208ENST00000563448 PRICKLE2Q7Z3G6 844 aa9.26□□□□□ -0.93
SMG1-208ENST00000563448 APLFQ8IW19 511 aaPredicted RBP9.26□□□□□ -0.93
SMG1-208ENST00000563448 GPALPP1Q8IXQ4 340 aa9.26□□□□□ -0.93
SMG1-208ENST00000563448 CYP4Z2PQ8N1L4 340 aa9.26□□□□□ -0.93
SMG1-208ENST00000563448 ATG16L2Q8NAA4 619 aa9.26□□□□□ -0.93
SMG1-208ENST00000563448 TOR1AIP2Q8NFQ8 470 aa9.26□□□□□ -0.93
SMG1-208ENST00000563448 OR4K5Q8NGD3 323 aa9.26□□□□□ -0.93
SMG1-208ENST00000563448 OR5W2Q8NH69 310 aa9.26□□□□□ -0.93
SMG1-208ENST00000563448 ZNF563Q8TA94 476 aa9.26□□□□□ -0.93
SMG1-208ENST00000563448 GPR119Q8TDV5 335 aa9.26□□□□□ -0.93
SMG1-208ENST00000563448 ACOT11Q8WXI4 607 aaPredicted RBP9.26□□□□□ -0.93
SMG1-208ENST00000563448 C3orf49Q96BT1 292 aa9.26□□□□□ -0.93
SMG1-208ENST00000563448 SGCZQ96LD1 299 aa9.26□□□□□ -0.93
SMG1-208ENST00000563448 SDHAF3Q9NRP4 125 aa9.26□□□□□ -0.93
SMG1-208ENST00000563448 SMPD3Q9NY59 655 aaPredicted RBP9.26□□□□□ -0.93
SMG1-208ENST00000563448 MED11Q9P086 117 aa9.26□□□□□ -0.93
SMG1-208ENST00000563448 PPP4R1LQ9P1A2 415 aa9.26□□□□□ -0.93
SMG1-208ENST00000563448 RPS6KB2Q9UBS0 482 aa9.26□□□□□ -0.93
SMG1-208ENST00000563448 FREM2Q5SZK8 3169 aa9.26□□□□□ -0.93
SMG1-208ENST00000563448 IGLV3-32A0A0A0MS00 114 aa9.26□□□□□ -0.93
SMG1-208ENST00000563448 ANKUB1A6NFN9 424 aa9.26□□□□□ -0.93
SMG1-208ENST00000563448 PIP5K1CO60331 668 aa9.26□□□□□ -0.93
SMG1-208ENST00000563448 SNAP29O95721 258 aa9.26□□□□□ -0.93
SMG1-208ENST00000563448 PGCP20142 388 aa9.26□□□□□ -0.93
SMG1-208ENST00000563448 ITPKBP27987 946 aa9.26□□□□□ -0.93
SMG1-208ENST00000563448 CD96P40200 585 aa9.26□□□□□ -0.93
SMG1-208ENST00000563448 CYB561P49447 251 aa9.26□□□□□ -0.93
SMG1-208ENST00000563448 UGT2B15P54855 530 aa9.26□□□□□ -0.93
SMG1-208ENST00000563448 TUBA3CQ13748 450 aa9.26□□□□□ -0.93
SMG1-208ENST00000563448 DEFB109BQ30KR1 87 aa9.26□□□□□ -0.93
SMG1-208ENST00000563448 ZIK1Q3SY52 487 aaPredicted RBP9.26□□□□□ -0.93
SMG1-208ENST00000563448 NHSL2Q5HYW2 709 aa9.26□□□□□ -0.93
SMG1-208ENST00000563448 ALG10BQ5I7T1 473 aa9.26□□□□□ -0.93
SMG1-208ENST00000563448 TUBA3EQ6PEY2 450 aa9.26□□□□□ -0.93
SMG1-208ENST00000563448 ULK3Q6PHR2 472 aa9.26□□□□□ -0.93
SMG1-208ENST00000563448 LINC00696Q6ZRV3 163 aa9.26□□□□□ -0.93
SMG1-208ENST00000563448 WDSUB1Q8N9V3 476 aa9.26□□□□□ -0.93
SMG1-208ENST00000563448 AQP11Q8NBQ7 271 aa9.26□□□□□ -0.93
SMG1-208ENST00000563448 RNF217Q8TC41 542 aa9.26□□□□□ -0.93
SMG1-208ENST00000563448 ADAM19Q9H013 955 aa9.26□□□□□ -0.93
SMG1-208ENST00000563448 GPR83Q9NYM4 423 aa9.26□□□□□ -0.93
SMG1-208ENST00000563448 CNIH4Q9P003 139 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms