RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 ANKDD1BA6NHY2 528 aa4.18□□□□□ -1.74
SMG1-206ENST00000562668 HMGB1P1B2RPK0 211 aaPredicted RBP4.18□□□□□ -1.74
SMG1-206ENST00000562668 TMEM114B3SHH9 223 aa4.18□□□□□ -1.74
SMG1-206ENST00000562668 SAP18O00422 153 aaKnown RBP4.18□□□□□ -1.74
SMG1-206ENST00000562668 SOCS6O14544 535 aa4.18□□□□□ -1.74
SMG1-206ENST00000562668 ZNF195O14628 629 aa4.18□□□□□ -1.74
SMG1-206ENST00000562668 KLF11O14901 512 aa4.18□□□□□ -1.74
SMG1-206ENST00000562668 AZIN1O14977 448 aa4.18□□□□□ -1.74
SMG1-206ENST00000562668 ERI3O43414 337 aaKnown RBP4.18□□□□□ -1.74
SMG1-206ENST00000562668 ATP8B1O43520 1251 aa4.18□□□□□ -1.74
SMG1-206ENST00000562668 CHST10O43529 356 aa4.18□□□□□ -1.74
SMG1-206ENST00000562668 SLC25A17O43808 307 aa4.18□□□□□ -1.74
SMG1-206ENST00000562668 XPNPEP2O43895 674 aa4.18□□□□□ -1.74
SMG1-206ENST00000562668 SH3BGRLO75368 114 aa4.18□□□□□ -1.74
SMG1-206ENST00000562668 EEDO75530 441 aaKnown RBP4.18□□□□□ -1.74
SMG1-206ENST00000562668 CREG1O75629 220 aa4.18□□□□□ -1.74
SMG1-206ENST00000562668 GAGE7O76087 117 aa4.18□□□□□ -1.74
SMG1-206ENST00000562668 SEMA3DO95025 777 aa4.18□□□□□ -1.74
SMG1-206ENST00000562668 BMP10O95393 424 aa4.18□□□□□ -1.74
SMG1-206ENST00000562668 PMS2P2O95744 297 aa4.18□□□□□ -1.74
SMG1-206ENST00000562668 SERPINE1P05121 402 aa4.18□□□□□ -1.74
SMG1-206ENST00000562668 GAGE12FP0CL80 117 aa4.18□□□□□ -1.74
SMG1-206ENST00000562668 GAGE12GP0CL81 117 aa4.18□□□□□ -1.74
SMG1-206ENST00000562668 GAGE12IP0CL82 117 aa4.18□□□□□ -1.74
SMG1-206ENST00000562668 UROSP10746 265 aa4.18□□□□□ -1.74
SMG1-206ENST00000562668 PCNAP12004 261 aa4.18□□□□□ -1.74
SMG1-206ENST00000562668 HIST1H1TP22492 207 aaPredicted RBP4.18□□□□□ -1.74
SMG1-206ENST00000562668 SERPINB5P36952 375 aa4.18□□□□□ -1.74
SMG1-206ENST00000562668 TSFMP43897 325 aaKnown RBP4.18□□□□□ -1.74
SMG1-206ENST00000562668 LIM2P55344 173 aa4.18□□□□□ -1.74
SMG1-206ENST00000562668 HNRNPH2P55795 449 aaKnown RBP4.18□□□□□ -1.74
SMG1-206ENST00000562668 ABCE1P61221 599 aaKnown RBP4.18□□□□□ -1.74
SMG1-206ENST00000562668 STXBP1P61764 594 aaKnown RBP4.18□□□□□ -1.74
SMG1-206ENST00000562668 IGLV3-21P80748 117 aaPredicted RBP4.18□□□□□ -1.74
SMG1-206ENST00000562668 KLC1Q07866 573 aa4.18□□□□□ -1.74
SMG1-206ENST00000562668 RGS1Q08116 209 aa4.18□□□□□ -1.74
SMG1-206ENST00000562668 CSTF3Q12996 717 aaKnown RBP4.18□□□□□ -1.74
SMG1-206ENST00000562668 GAGE1Q13065 139 aa4.18□□□□□ -1.74
SMG1-206ENST00000562668 GAGE4Q13068 117 aa4.18□□□□□ -1.74
SMG1-206ENST00000562668 DDX39BQ13838 428 aaKnown RBP4.18□□□□□ -1.74
SMG1-206ENST00000562668 HERC3Q15034 1050 aa4.18□□□□□ -1.74
SMG1-206ENST00000562668 CHI3L2Q15782 390 aa4.18□□□□□ -1.74
SMG1-206ENST00000562668 RBBP7Q16576 425 aa4.18□□□□□ -1.74
SMG1-206ENST00000562668 HIST2H2ACQ16777 129 aaPredicted RBP4.18□□□□□ -1.74
SMG1-206ENST00000562668 NDUFA9Q16795 377 aa4.18□□□□□ -1.74
SMG1-206ENST00000562668 LINC00303Q3SY05 128 aa4.18□□□□□ -1.74
SMG1-206ENST00000562668 TMEM35AQ53FP2 167 aa4.18□□□□□ -1.74
SMG1-206ENST00000562668 C10orf62Q5T681 223 aaPredicted RBP4.18□□□□□ -1.74
SMG1-206ENST00000562668 CLEC6AQ6EIG7 209 aa4.18□□□□□ -1.74
SMG1-206ENST00000562668 HIST2H2AA3Q6FI13 130 aa4.18□□□□□ -1.74
SMG1-206ENST00000562668 OR4C11Q6IEV9 310 aa4.18□□□□□ -1.74
SMG1-206ENST00000562668 SCIMPQ6UWF3 145 aa4.18□□□□□ -1.74
SMG1-206ENST00000562668 SHISA6Q6ZSJ9 500 aa4.18□□□□□ -1.74
SMG1-206ENST00000562668 TUBA1AQ71U36 451 aa4.18□□□□□ -1.74
SMG1-206ENST00000562668 ABHD13Q7L211 337 aa4.18□□□□□ -1.74
SMG1-206ENST00000562668 NUDCD3Q8IVD9 361 aa4.18□□□□□ -1.74
SMG1-206ENST00000562668 ZCCHC7Q8N3Z6 543 aaKnown RBP4.18□□□□□ -1.74
SMG1-206ENST00000562668 TBC1D19Q8N5T2 526 aa4.18□□□□□ -1.74
SMG1-206ENST00000562668 ZNF781Q8N8C0 355 aa4.18□□□□□ -1.74
SMG1-206ENST00000562668 ANKRD42Q8N9B4 389 aa4.18□□□□□ -1.74
SMG1-206ENST00000562668 ACOT4Q8N9L9 421 aa4.18□□□□□ -1.74
SMG1-206ENST00000562668 CCDC63Q8NA47 563 aa4.18□□□□□ -1.74
SMG1-206ENST00000562668 PLPP5Q8NEB5 264 aa4.18□□□□□ -1.74
SMG1-206ENST00000562668 OR2Y1Q8NGV0 311 aa4.18□□□□□ -1.74
SMG1-206ENST00000562668 OR51Q1Q8NH59 317 aa4.18□□□□□ -1.74
SMG1-206ENST00000562668 METTL6Q8TCB7 284 aa4.18□□□□□ -1.74
SMG1-206ENST00000562668 STARD8Q92502 1023 aa4.18□□□□□ -1.74
SMG1-206ENST00000562668 N4BP2L2Q92802 583 aaPredicted RBP4.18□□□□□ -1.74
SMG1-206ENST00000562668 MMABQ96EY8 250 aaPredicted RBP4.18□□□□□ -1.74
SMG1-206ENST00000562668 CMTM7Q96FZ5 175 aa4.18□□□□□ -1.74
SMG1-206ENST00000562668 C3orf30Q96M34 536 aa4.18□□□□□ -1.74
SMG1-206ENST00000562668 SERINC2Q96SA4 455 aa4.18□□□□□ -1.74
SMG1-206ENST00000562668 CSF3RQ99062 836 aa4.18□□□□□ -1.74
SMG1-206ENST00000562668 HBEGFQ99075 208 aa4.18□□□□□ -1.74
SMG1-206ENST00000562668 MAPKAP1Q9BPZ7 522 aa4.18□□□□□ -1.74
SMG1-206ENST00000562668 C17orf62Q9BQA9 187 aa4.18□□□□□ -1.74
SMG1-206ENST00000562668 TUBA1CQ9BQE3 449 aa4.18□□□□□ -1.74
SMG1-206ENST00000562668 TBCDQ9BTW9 1192 aa4.18□□□□□ -1.74
SMG1-206ENST00000562668 NPLQ9BXD5 320 aaPredicted RBP4.18□□□□□ -1.74
SMG1-206ENST00000562668 MRPL1Q9BYD6 325 aaKnown RBP4.18□□□□□ -1.74
SMG1-206ENST00000562668 SHCBP1LQ9BZQ2 653 aa4.18□□□□□ -1.74
SMG1-206ENST00000562668 IQCGQ9H095 443 aaKnown RBP4.18□□□□□ -1.74
SMG1-206ENST00000562668 STMN4Q9H169 189 aaPredicted RBP4.18□□□□□ -1.74
SMG1-206ENST00000562668 GPN2Q9H9Y4 310 aaPredicted RBP4.18□□□□□ -1.74
SMG1-206ENST00000562668 BRF2Q9HAW0 419 aa4.18□□□□□ -1.74
SMG1-206ENST00000562668 ANKHQ9HCJ1 492 aa4.18□□□□□ -1.74
SMG1-206ENST00000562668 MKKSQ9NPJ1 570 aaPredicted RBP4.18□□□□□ -1.74
SMG1-206ENST00000562668 ANKRD10Q9NXR5 420 aa4.18□□□□□ -1.74
SMG1-206ENST00000562668 HCN3Q9P1Z3 774 aa4.18□□□□□ -1.74
SMG1-206ENST00000562668 IFT80Q9P2H3 777 aaPredicted RBP4.18□□□□□ -1.74
SMG1-206ENST00000562668 CDC14AQ9UNH5 594 aa4.18□□□□□ -1.74
SMG1-206ENST00000562668 EXO1Q9UQ84 846 aaKnown RBP4.18□□□□□ -1.74
SMG1-206ENST00000562668 STK38LQ9Y2H1 464 aa4.18□□□□□ -1.74
SMG1-206ENST00000562668 PTPRQQ9UMZ3 2332 aa4.18□□□□□ -1.74
SMG1-206ENST00000562668 TNRC6AQ8NDV7 1962 aaKnown RBP4.18□□□□□ -1.74
SMG1-206ENST00000562668 CPAMD8Q8IZJ3 1885 aa4.18□□□□□ -1.74
SMG1-206ENST00000562668 SCN2AQ99250 2005 aa4.17□□□□□ -1.74
SMG1-206ENST00000562668 SEC16AO15027 2179 aa4.17□□□□□ -1.74
SMG1-206ENST00000562668 SMG1Q96Q15 3661 aaKnown RBP4.17□□□□□ -1.74
SMG1-206ENST00000562668 URADA6NGE7 173 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms