RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 ZNF169Q14929 603 aaPredicted RBP10.55□□□□□ -0.72
RPAP1-204ENST00000562303 DPY19L2P1Q6NXN4 242 aa10.55□□□□□ -0.72
RPAP1-204ENST00000562303 MDGA1Q8NFP4 955 aa10.55□□□□□ -0.72
RPAP1-204ENST00000562303 SYNPRQ8TBG9 265 aa10.55□□□□□ -0.72
RPAP1-204ENST00000562303 TIMM29Q9BSF4 260 aa10.55□□□□□ -0.72
RPAP1-204ENST00000562303 BTBD2Q9BX70 525 aa10.55□□□□□ -0.72
RPAP1-204ENST00000562303 VN1R3Q9BXE9 311 aa10.55□□□□□ -0.72
RPAP1-204ENST00000562303 DUOX1Q9NRD9 1551 aa10.55□□□□□ -0.72
RPAP1-204ENST00000562303 UBQLN4Q9NRR5 601 aa10.55□□□□□ -0.72
RPAP1-204ENST00000562303 THSD1Q9NS62 852 aa10.55□□□□□ -0.72
RPAP1-204ENST00000562303 PCDHGA1Q9Y5H4 931 aa10.55□□□□□ -0.72
RPAP1-204ENST00000562303 F5H5P2 479 aa10.55□□□□□ -0.72
RPAP1-204ENST00000562303 SLC34A2O95436 690 aa10.55□□□□□ -0.72
RPAP1-204ENST00000562303 TFPTP0C1Z6 253 aa10.55□□□□□ -0.72
RPAP1-204ENST00000562303 F3P13726 295 aa10.55□□□□□ -0.72
RPAP1-204ENST00000562303 PTGER4P35408 488 aa10.55□□□□□ -0.72
RPAP1-204ENST00000562303 DCTP40126 519 aa10.55□□□□□ -0.72
RPAP1-204ENST00000562303 ETV4P43268 484 aa10.55□□□□□ -0.72
RPAP1-204ENST00000562303 VASNQ6EMK4 673 aa10.55□□□□□ -0.72
RPAP1-204ENST00000562303 LCN10Q6JVE6 187 aa10.55□□□□□ -0.72
RPAP1-204ENST00000562303 LCN8Q6JVE9 175 aa10.55□□□□□ -0.72
RPAP1-204ENST00000562303 FAM57BQ71RH2 274 aa10.55□□□□□ -0.72
RPAP1-204ENST00000562303 TAS1R1Q7RTX1 841 aa10.55□□□□□ -0.72
RPAP1-204ENST00000562303 DNAJC22Q8N4W6 341 aa10.55□□□□□ -0.72
RPAP1-204ENST00000562303 ADAMTS19Q8TE59 1207 aa10.55□□□□□ -0.72
RPAP1-204ENST00000562303 C7orf43Q8WVR3 580 aa10.55□□□□□ -0.72
RPAP1-204ENST00000562303 EDAQ92838 391 aa10.55□□□□□ -0.72
RPAP1-204ENST00000562303 ZNF775Q96BV0 537 aaPredicted RBP10.55□□□□□ -0.72
RPAP1-204ENST00000562303 DECR2Q9NUI1 292 aa10.55□□□□□ -0.72
RPAP1-204ENST00000562303 TRAV27A0A087WT01 109 aa10.55□□□□□ -0.72
RPAP1-204ENST00000562303 A0A1W2PQL4 384 aaPredicted RBP10.55□□□□□ -0.72
RPAP1-204ENST00000562303 CD68P34810 354 aaPredicted RBP10.55□□□□□ -0.72
RPAP1-204ENST00000562303 CSNK1EP49674 416 aaKnown RBP10.55□□□□□ -0.72
RPAP1-204ENST00000562303 SIRPAP78324 504 aa10.55□□□□□ -0.72
RPAP1-204ENST00000562303 CCBE1Q6UXH8 406 aaPredicted RBP10.55□□□□□ -0.72
RPAP1-204ENST00000562303 FBXW12Q6X9E4 464 aa10.55□□□□□ -0.72
RPAP1-204ENST00000562303 ZC3H3Q8IXZ2 948 aaKnown RBP10.55□□□□□ -0.72
RPAP1-204ENST00000562303 BBS1Q8NFJ9 593 aa10.55□□□□□ -0.72
RPAP1-204ENST00000562303 TCTN2Q96GX1 697 aa10.55□□□□□ -0.72
RPAP1-204ENST00000562303 IGKV6-21A0A0C4DH24 114 aa10.55□□□□□ -0.72
RPAP1-204ENST00000562303 C17orf113A0A1B0GUU1 675 aa10.55□□□□□ -0.72
RPAP1-204ENST00000562303 KCNK5O95279 499 aa10.55□□□□□ -0.72
RPAP1-204ENST00000562303 AKAIN1P0CW23 69 aa10.55□□□□□ -0.72
RPAP1-204ENST00000562303 CTSCP53634 463 aa10.55□□□□□ -0.72
RPAP1-204ENST00000562303 DCAF7P61962 342 aa10.55□□□□□ -0.72
RPAP1-204ENST00000562303 CCNJQ5T5M9 372 aa10.55□□□□□ -0.72
RPAP1-204ENST00000562303 PTCRAQ6ISU1 281 aaPredicted RBP10.55□□□□□ -0.72
RPAP1-204ENST00000562303 FAM198BQ6UWH4 519 aa10.55□□□□□ -0.72
RPAP1-204ENST00000562303 RANBP10Q6VN20 620 aa10.55□□□□□ -0.72
RPAP1-204ENST00000562303 CYS1Q717R9 158 aa10.55□□□□□ -0.72
RPAP1-204ENST00000562303 PRSS48Q7RTY5 328 aa10.55□□□□□ -0.72
RPAP1-204ENST00000562303 CCDC28AQ8IWP9 274 aa10.55□□□□□ -0.72
RPAP1-204ENST00000562303 GOLM1Q8NBJ4 401 aa10.55□□□□□ -0.72
RPAP1-204ENST00000562303 PAQR5Q9NXK6 330 aaPredicted RBP10.55□□□□□ -0.72
RPAP1-204ENST00000562303 PHLPP1O60346 1717 aa10.54□□□□□ -0.72
RPAP1-204ENST00000562303 HSD17B1P14061 328 aa10.54□□□□□ -0.72
RPAP1-204ENST00000562303 MAOAP21397 527 aa10.54□□□□□ -0.72
RPAP1-204ENST00000562303 SSR4P51571 173 aa10.54□□□□□ -0.72
RPAP1-204ENST00000562303 CCL11P51671 97 aa10.54□□□□□ -0.72
RPAP1-204ENST00000562303 F2RL1P55085 397 aa10.54□□□□□ -0.72
RPAP1-204ENST00000562303 RPS18P62269 152 aaKnown RBP10.54□□□□□ -0.72
RPAP1-204ENST00000562303 DYRK1AQ13627 763 aa10.54□□□□□ -0.72
RPAP1-204ENST00000562303 TMEM176BQ3YBM2 270 aaPredicted RBP10.54□□□□□ -0.72
RPAP1-204ENST00000562303 MPP7Q5T2T1 576 aa10.54□□□□□ -0.72
RPAP1-204ENST00000562303 LINC00696Q6ZRV3 163 aa10.54□□□□□ -0.72
RPAP1-204ENST00000562303 SULF2Q8IWU5 870 aa10.54□□□□□ -0.72
RPAP1-204ENST00000562303 OR6C1Q96RD1 312 aa10.54□□□□□ -0.72
RPAP1-204ENST00000562303 C7orf50Q9BRJ6 194 aaKnown RBP10.54□□□□□ -0.72
RPAP1-204ENST00000562303 FUNDC2Q9BWH2 189 aa10.54□□□□□ -0.72
RPAP1-204ENST00000562303 SMOXQ9NWM0 555 aa10.54□□□□□ -0.72
RPAP1-204ENST00000562303 ZNF443Q9Y2A4 671 aaPredicted RBP10.54□□□□□ -0.72
RPAP1-204ENST00000562303 TMEM269A0A1B0GVZ9 245 aa10.54□□□□□ -0.72
RPAP1-204ENST00000562303 A6NHS1 94 aa10.54□□□□□ -0.72
RPAP1-204ENST00000562303 CPMP14384 443 aa10.54□□□□□ -0.72
RPAP1-204ENST00000562303 PSMB5P28074 263 aa10.54□□□□□ -0.72
RPAP1-204ENST00000562303 MAT1AQ00266 395 aaKnown RBP10.54□□□□□ -0.72
RPAP1-204ENST00000562303 RDH10Q8IZV5 341 aa10.54□□□□□ -0.72
RPAP1-204ENST00000562303 UCN3Q969E3 161 aa10.54□□□□□ -0.72
RPAP1-204ENST00000562303 PTERQ96BW5 349 aa10.54□□□□□ -0.72
RPAP1-204ENST00000562303 TEX10Q9NXF1 929 aaPredicted RBP10.54□□□□□ -0.72
RPAP1-204ENST00000562303 HHLA2Q9UM44 414 aa10.54□□□□□ -0.72
RPAP1-204ENST00000562303 NOSIPQ9Y314 301 aaKnown RBP10.54□□□□□ -0.72
RPAP1-204ENST00000562303 PTPN6P29350 595 aa10.54□□□□□ -0.72
RPAP1-204ENST00000562303 CXCR4P61073 352 aa10.54□□□□□ -0.72
RPAP1-204ENST00000562303 NCS1P62166 190 aa10.54□□□□□ -0.72
RPAP1-204ENST00000562303 ELP2Q6IA86 826 aa10.54□□□□□ -0.72
RPAP1-204ENST00000562303 OR14A16Q8NHC5 309 aa10.54□□□□□ -0.72
RPAP1-204ENST00000562303 TRUB1Q8WWH5 349 aaKnown RBP10.54□□□□□ -0.72
RPAP1-204ENST00000562303 MYLIPQ8WY64 445 aa10.54□□□□□ -0.72
RPAP1-204ENST00000562303 FOXRED1Q96CU9 486 aaPredicted RBP10.54□□□□□ -0.72
RPAP1-204ENST00000562303 PGAP3Q96FM1 320 aaPredicted RBP10.54□□□□□ -0.72
RPAP1-204ENST00000562303 PRRC1Q96M27 445 aa10.54□□□□□ -0.72
RPAP1-204ENST00000562303 FER1L6-AS2Q96M78 137 aa10.54□□□□□ -0.72
RPAP1-204ENST00000562303 OR7D2Q96RA2 312 aa10.54□□□□□ -0.72
RPAP1-204ENST00000562303 EDARQ9UNE0 448 aa10.54□□□□□ -0.72
RPAP1-204ENST00000562303 RPH3ALQ9UNE2 315 aa10.54□□□□□ -0.72
RPAP1-204ENST00000562303 ZNF254O75437 659 aa10.54□□□□□ -0.72
RPAP1-204ENST00000562303 KITLGP21583 273 aa10.54□□□□□ -0.72
RPAP1-204ENST00000562303 BMXP51813 675 aa10.54□□□□□ -0.72
RPAP1-204ENST00000562303 PPP5CP53041 499 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms