RNA–Protein interactions for RNA: ENST00000561071.5

MARK3-223, Transcript of microtubule affinity regulating kinase 3, human

TSL 3

Gene MARK3, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-223	ENST00000561071	XK	P51811	444 aa		6.41	□□□□□ -1.38
MARK3-223	ENST00000561071	PRKAA2	P54646	552 aa		6.41	□□□□□ -1.38
MARK3-223	ENST00000561071	CDH13	P55290	713 aa		6.41	□□□□□ -1.38
MARK3-223	ENST00000561071	CUL3	Q13618	768 aa		6.41	□□□□□ -1.38
MARK3-223	ENST00000561071	EBP	Q15125	230 aa	Known RBP	6.41	□□□□□ -1.38
MARK3-223	ENST00000561071	RPS6KA2	Q15349	733 aa		6.41	□□□□□ -1.38
MARK3-223	ENST00000561071	NNAT	Q16517	81 aa		6.41	□□□□□ -1.38
MARK3-223	ENST00000561071	HYAL4	Q2M3T9	481 aa		6.41	□□□□□ -1.38
MARK3-223	ENST00000561071	CEP78	Q5JTW2	689 aa		6.41	□□□□□ -1.38
MARK3-223	ENST00000561071	TTC19	Q6DKK2	380 aa	Predicted RBP	6.41	□□□□□ -1.38
MARK3-223	ENST00000561071	FAM180B	Q6P0A1	224 aa		6.41	□□□□□ -1.38
MARK3-223	ENST00000561071	KLC3	Q6P597	504 aa		6.41	□□□□□ -1.38
MARK3-223	ENST00000561071	B3GNT6	Q6ZMB0	384 aa		6.41	□□□□□ -1.38
MARK3-223	ENST00000561071	ANKRD42	Q8N9B4	389 aa		6.41	□□□□□ -1.38
MARK3-223	ENST00000561071	NOA1	Q8NC60	698 aa	Known RBP	6.41	□□□□□ -1.38
MARK3-223	ENST00000561071	SLC22A8	Q8TCC7	542 aa		6.41	□□□□□ -1.38
MARK3-223	ENST00000561071	PAQR8	Q8TEZ7	354 aa		6.41	□□□□□ -1.38
MARK3-223	ENST00000561071	IFT81	Q8WYA0	676 aa		6.41	□□□□□ -1.38
MARK3-223	ENST00000561071	ATP6V1E2	Q96A05	226 aa		6.41	□□□□□ -1.38
MARK3-223	ENST00000561071	C3orf49	Q96BT1	292 aa		6.41	□□□□□ -1.38
MARK3-223	ENST00000561071	C14orf79	Q96F83	325 aa		6.41	□□□□□ -1.38
MARK3-223	ENST00000561071	HBEGF	Q99075	208 aa		6.41	□□□□□ -1.38
MARK3-223	ENST00000561071	KRTAP4-5	Q9BYR2	181 aa		6.41	□□□□□ -1.38
MARK3-223	ENST00000561071	CDC42EP4	Q9H3Q1	356 aa	Known RBP	6.41	□□□□□ -1.38
MARK3-223	ENST00000561071	CXorf21	Q9HAI6	301 aa		6.41	□□□□□ -1.38
MARK3-223	ENST00000561071	LYAR	Q9NX58	379 aa	Known RBP	6.41	□□□□□ -1.38
MARK3-223	ENST00000561071	PCTP	Q9UKL6	214 aa		6.41	□□□□□ -1.38
MARK3-223	ENST00000561071	NFU1	Q9UMS0	254 aa		6.41	□□□□□ -1.38
MARK3-223	ENST00000561071	SLC12A4	Q9UP95	1085 aa		6.41	□□□□□ -1.38
MARK3-223	ENST00000561071	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	6.41	□□□□□ -1.38
MARK3-223	ENST00000561071	HCFC1	P51610	2035 aa		6.41	□□□□□ -1.38
MARK3-223	ENST00000561071	PHF3	Q92576	2039 aa	Known RBP	6.4	□□□□□ -1.38
MARK3-223	ENST00000561071	MED12	Q93074	2177 aa		6.4	□□□□□ -1.38
MARK3-223	ENST00000561071	C2orf92	A0A1B0GVN3	265 aa		6.4	□□□□□ -1.38
MARK3-223	ENST00000561071	SYNDIG1L	A6NDD5	238 aa		6.4	□□□□□ -1.38
MARK3-223	ENST00000561071	FOXE1	O00358	373 aa	Predicted RBP	6.4	□□□□□ -1.38
MARK3-223	ENST00000561071	RRH	O14718	337 aa		6.4	□□□□□ -1.38
MARK3-223	ENST00000561071	BCKDK	O14874	412 aa		6.4	□□□□□ -1.38
MARK3-223	ENST00000561071	HCN1	O60741	890 aa		6.4	□□□□□ -1.38
MARK3-223	ENST00000561071	TRIM3	O75382	744 aa	Predicted RBP	6.4	□□□□□ -1.38
MARK3-223	ENST00000561071	TRAPPC6A	O75865	159 aa		6.4	□□□□□ -1.38
MARK3-223	ENST00000561071	INHBA	P08476	426 aa		6.4	□□□□□ -1.38
MARK3-223	ENST00000561071	HOXD4	P09016	255 aa	Predicted RBP	6.4	□□□□□ -1.38
MARK3-223	ENST00000561071	CAPN3	P20807	821 aa		6.4	□□□□□ -1.38
MARK3-223	ENST00000561071	S1PR1	P21453	382 aa		6.4	□□□□□ -1.38
MARK3-223	ENST00000561071	NT5E	P21589	574 aa		6.4	□□□□□ -1.38
MARK3-223	ENST00000561071	PIK3R1	P27986	724 aa		6.4	□□□□□ -1.38
MARK3-223	ENST00000561071	PHB	P35232	272 aa		6.4	□□□□□ -1.38
MARK3-223	ENST00000561071	FEN1	P39748	380 aa	Known RBP	6.4	□□□□□ -1.38
MARK3-223	ENST00000561071	CCNG1	P51959	295 aa		6.4	□□□□□ -1.38
MARK3-223	ENST00000561071	PHEX	P78562	749 aa		6.4	□□□□□ -1.38
MARK3-223	ENST00000561071	CKAP4	Q07065	602 aa	Known RBP	6.4	□□□□□ -1.38
MARK3-223	ENST00000561071	TRAF3	Q13114	568 aa		6.4	□□□□□ -1.38
MARK3-223	ENST00000561071	MYBPH	Q13203	477 aa		6.4	□□□□□ -1.38
MARK3-223	ENST00000561071	BIK	Q13323	160 aa		6.4	□□□□□ -1.38
MARK3-223	ENST00000561071	EXOSC7	Q15024	291 aa	Known RBP	6.4	□□□□□ -1.38
MARK3-223	ENST00000561071	GALNTL6	Q49A17	601 aa		6.4	□□□□□ -1.38
MARK3-223	ENST00000561071	TCHHL1	Q5QJ38	904 aa	Predicted RBP	6.4	□□□□□ -1.38
MARK3-223	ENST00000561071	TEX35	Q5T0J7	233 aa		6.4	□□□□□ -1.38
MARK3-223	ENST00000561071	CCNYL2	Q5T2Q4	361 aa		6.4	□□□□□ -1.38
MARK3-223	ENST00000561071	C1orf185	Q5T7R7	199 aa		6.4	□□□□□ -1.38
MARK3-223	ENST00000561071	WLS	Q5T9L3	541 aa		6.4	□□□□□ -1.38
MARK3-223	ENST00000561071	FRG2	Q64ET8	278 aa		6.4	□□□□□ -1.38
MARK3-223	ENST00000561071	OR52E8	Q6IFG1	317 aa		6.4	□□□□□ -1.38
MARK3-223	ENST00000561071	NUDT13	Q86X67	352 aa		6.4	□□□□□ -1.38
MARK3-223	ENST00000561071	LRRC25	Q8N386	305 aa	Predicted RBP	6.4	□□□□□ -1.38
MARK3-223	ENST00000561071	FBXW8	Q8N3Y1	598 aa		6.4	□□□□□ -1.38
MARK3-223	ENST00000561071	ZNF615	Q8N8J6	731 aa		6.4	□□□□□ -1.38
MARK3-223	ENST00000561071	ZNF441	Q8N8Z8	693 aa		6.4	□□□□□ -1.38
MARK3-223	ENST00000561071	OR4F6	Q8NGB9	312 aa		6.4	□□□□□ -1.38
MARK3-223	ENST00000561071	OR4K14	Q8NGD5	310 aa		6.4	□□□□□ -1.38
MARK3-223	ENST00000561071	DCAKD	Q8WVC6	231 aa		6.4	□□□□□ -1.38
MARK3-223	ENST00000561071	SLC44A1	Q8WWI5	657 aa		6.4	□□□□□ -1.38
MARK3-223	ENST00000561071	ART5	Q96L15	291 aa		6.4	□□□□□ -1.38
MARK3-223	ENST00000561071	C16orf45	Q96MC5	204 aa	Predicted RBP	6.4	□□□□□ -1.38
MARK3-223	ENST00000561071	RILP	Q96NA2	401 aa		6.4	□□□□□ -1.38
MARK3-223	ENST00000561071	FRG2B	Q96QU4	278 aa		6.4	□□□□□ -1.38
MARK3-223	ENST00000561071	PAFAH2	Q99487	392 aa		6.4	□□□□□ -1.38
MARK3-223	ENST00000561071	SERPINI1	Q99574	410 aa		6.4	□□□□□ -1.38
MARK3-223	ENST00000561071	ZNF559	Q9BR84	538 aa		6.4	□□□□□ -1.38
MARK3-223	ENST00000561071	DOHH	Q9BU89	302 aa		6.4	□□□□□ -1.38
MARK3-223	ENST00000561071	WDR41	Q9HAD4	459 aa		6.4	□□□□□ -1.38
MARK3-223	ENST00000561071	ARL8B	Q9NVJ2	186 aa		6.4	□□□□□ -1.38
MARK3-223	ENST00000561071	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	6.4	□□□□□ -1.38
MARK3-223	ENST00000561071	CNIH4	Q9P003	139 aa		6.4	□□□□□ -1.38
MARK3-223	ENST00000561071	BOK	Q9UMX3	212 aa	Predicted RBP	6.4	□□□□□ -1.38
MARK3-223	ENST00000561071	C19orf53	Q9UNZ5	99 aa	Predicted RBP	6.4	□□□□□ -1.38
MARK3-223	ENST00000561071	DTX4	Q9Y2E6	619 aa		6.4	□□□□□ -1.38
MARK3-223	ENST00000561071	SLC6A5	Q9Y345	797 aa		6.4	□□□□□ -1.38
MARK3-223	ENST00000561071	HRNR	Q86YZ3	2850 aa	Predicted RBP	6.4	□□□□□ -1.38
MARK3-223	ENST00000561071	FREM3	P0C091	2139 aa		6.4	□□□□□ -1.39
MARK3-223	ENST00000561071	ANKHD1	Q8IWZ3	2542 aa	Known RBP	6.39	□□□□□ -1.39
MARK3-223	ENST00000561071	C15orf38-AP3S2	A0A0A6YYH1	394 aa		6.39	□□□□□ -1.39
MARK3-223	ENST00000561071	CGB1	A6NKQ9	187 aa		6.39	□□□□□ -1.39
MARK3-223	ENST00000561071	OR6C76	A6NM76	312 aa		6.39	□□□□□ -1.39
MARK3-223	ENST00000561071		A8MT66	165 aa		6.39	□□□□□ -1.39
MARK3-223	ENST00000561071	TRIM49D1	C9J1S8	452 aa		6.39	□□□□□ -1.39
MARK3-223	ENST00000561071		H0Y3Z8	333 aa		6.39	□□□□□ -1.39
MARK3-223	ENST00000561071	UGDH	O60701	494 aa		6.39	□□□□□ -1.39
MARK3-223	ENST00000561071	SMIM24	O75264	130 aa		6.39	□□□□□ -1.39

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